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The map label for this gene is omp85 [H]

Identifier: 85373590

GI number: 85373590

Start: 789582

End: 792275

Strand: Direct

Name: omp85 [H]

Synonym: ELI_03815

Alternate gene names: 85373590

Gene position: 789582-792275 (Clockwise)

Preceding gene: 85373589

Following gene: 85373591

Centisome position: 25.87

GC content: 62.06

Gene sequence:

>2694_bases
ATGAATGGCACCGCTAAGGGCCCTGCGCCTGTTTCGCGCAAGACCGGACAATGGGCGTTCGCACTGCTGTCGAGCACCAT
GCTGGCGGGCATTCCCGCCGGCGTGCTCGCGCAGGACACGACCATTCCGACGACTTCTGCAAACACCGCCCAGCCTGCGC
CTGCACCGGCACCGCAACCGCAGGGCGACATCATCCAGACGATCGCCGTGCAGGGCGCCCAGCGCCTCGAGCCGCAGACG
ATCCTCACCTATATCGACATCCGCCCGGGCCAGGAATACACGCAGGTCCTCGCCGACCAGGCGCTGAAGGATCTCTACCA
GACCGAGCTGTTCGCCAACGCCAGCGTCCGCAACGAGAACGGCAATGTCGTGATCGAGGTGACCGAAAATCCGGTCATCA
ACCGCATCATTCTGGAAGGCAACAAGCGGCTCAAGAACGACAAGATCGTTCCCGAGATCAAGCTGGCGCCGCGCCAGATC
TTCACCCGTTCCAAAGTCCGCGCCGACGTCGCCCGCATCATCGAGCTCTACAAGCGGCAGGGCCGCTTTGCCGCGACGGT
CGAGCCGAAGACGGTCCAGCTCAGCCAGAACCGCGTCGATCTGGTGTTCGAGATTACCGAAGGGCCCAAGTCCAAGGTTC
GCCAGATCAACATCATCGGCAACGAGGTATTCAGCGACGGCGACCTCAAGGGCGAGATGGTCACCAAGGAATCGCGGCTG
GTCAATTTCTTCAGCGGCAACACCAGCTACGATCCCGACCGGCTGGCGTTCGACCAGCAGAAGCTGCGCGAATTCTACCT
CACCGAAGGCTATGTCGATTTCCGCGTCGTTTCCGCCGTCGCCGAGCTGACGCCCGACAAGGAAGACTTCATCATCACCT
ACGTCGTCGAGGAAGGCGAACGCTACAAATTCGGTGATGTGAAGGTCGATTCCAACCTGCGCGATTTCGACAGCGACACC
ATGACGCGCCAGCTCAATATCGAGAGCGGTGCATGGTACGATGCCAAGCGCATCGAGGACATTACCGAGCAGCTGACCGA
GCTGGCCGGCACCTTCGGTTATGCTTTTGCCGACGTGCGCCCGCAGTTCGTCCGGAACAAGGACGAGTTGACGATGGACG
TGACGCTGGTCATCAGCGAAGCCCCGCGCGTCTACGTCGAGCGGGTCGACGTCAACGGCAACACACTGACGCAGGACAAG
GTCATCCGCCGCGAGATGCGCGTGGCAGAAGGCGACGCCTTCAACTCGCTCGCCGTCAAGCGGTCGACCAACCGCATCAA
CTCGCTCGGGTTCTTCCAGGAAGGCTTCGAGATCGAGCAGGCGGAAACCGCCGATCCCGACCGGATTATCCTCGAAGCCA
ATGTCGAAGAACAGCCGACCGGCGAACTGCAGCTTTCAGCGGGTTTTTCCTCGATCGAAAGCTTCCTGCTTGCCGCATCG
ATCCGGCAGCGCAACTTCCGCGGCCGCGGCCAGACCGTGGGGGCCGGTGTCCAGTGGTCGCGCTTCTCGCGCTCGGCCAA
CCTCAGCTTCACCGAACCCTATGTCTTCGACCGCAACATTTCGGCAGGCATCGATCTCTACCGCCGCGACATCAACAGCT
TCAACTTCGTCGGGCGCGATCGCAACACGACGTTCGAGCAATCGACCACGGGCGCGCAGCTGCGTCTCGGCGTGCCGCTG
ACCGAATATTTCACGCTCATCGGTAGCTACACGCTCAACATCGACGACATCACGCTGGACGAAAACACCTTCTTCGCCGA
CTTCGATGGTGACGGGGTGCGGACCTGCGAACCGCTGCTCGCCGGCCGCTTCCTGTGCGATGTCATCGGCAGCCGGACGA
GCTCGATCCTCGGCGCGAACCTCATTTACGACACGCTCAACAGTCGCTTCCGCCCCTCGGCCGGCGAGCAGGCGACGCTG
GCGGTCAATTTCGCCGGGCTCGGTGGCGATGTGAAGTACATCAAGGCCGAACTGCGCGCCCGCAAATTCTGGCGTGTGCT
CGGCAATTTCATCTTCTCGCTTTCGGCCGAGGGTGGCTACATCAAGGGTCTCGAAGATCGCGGCGGGCCGGGCGTGGACG
ACGTCCTTTTGACCGACCGCTTTTTCCTCGGCGAGCCGCAGATCCGCGGTTTCGACATTCGCGGCGTCGGCCCGCGCGTG
CTACGCCAGCCGATCCTCGACGACGGGAGCGGCAATCCGGTGGTGATTACCGATCGCAACCGCATTTCCGACGATGCCAT
CGGCGGCAACACCTATTACCTCGGCCGTGCGGAACTCGAAATCCCGCTCGGCAGCGGCGCGGCCGATCTCGGCCTGCGTC
CTTCGGTCTTCGTCGATGTCGGTGCGCTGTTCAATGTGACCGCCCCGACGCTGACGCAAAGCCCGTTCCCCGGCGGCCTC
AGCTTCCAGGTGCGGGATGCCAGCGGCAATCCCTTGTTCATCAGCGAGGATGGATTACCTACCCTCGAAACGGTGGATTC
GAACGGCAACCCGCTTTCGCCGCTGAACCAGACCATCGACCCCTTCCAGGAGGTGTTCCTGGGCGATTCCGCCAGTCCGC
GTGTTTCGGTGGGTATCGGGGTCAACTGGAATTCGCCCTTCGGTCCGTTCCGGATCGACTTCGCCCACGTGCTGAAGAAA
CAGCCGGGCGACGACACCAAGAGATTCTCCTTCAACGTAGGTACACAGTTCTAA

Upstream 100 bases:

>100_bases
GCACAGGGCGGCGGATTGATGGATTGATCGATCCGGGCCCCGATGCGCCAGGCAGGCCATGCCGGGCCGGATGAGAAACT
GGACGGGACAAATTTTCGCA

Downstream 100 bases:

>100_bases
TGCACACCTTCATCAAGACTTCGCTCACCGCCGCTCTCGCCGTCGCAGGCACCGGCATGGTCGCCGCTCCCGCCACCGCG
CAGGTGGCCGGCATCGCGAC

Product: outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 897; Mature: 897

Protein sequence:

>897_residues
MNGTAKGPAPVSRKTGQWAFALLSSTMLAGIPAGVLAQDTTIPTTSANTAQPAPAPAPQPQGDIIQTIAVQGAQRLEPQT
ILTYIDIRPGQEYTQVLADQALKDLYQTELFANASVRNENGNVVIEVTENPVINRIILEGNKRLKNDKIVPEIKLAPRQI
FTRSKVRADVARIIELYKRQGRFAATVEPKTVQLSQNRVDLVFEITEGPKSKVRQINIIGNEVFSDGDLKGEMVTKESRL
VNFFSGNTSYDPDRLAFDQQKLREFYLTEGYVDFRVVSAVAELTPDKEDFIITYVVEEGERYKFGDVKVDSNLRDFDSDT
MTRQLNIESGAWYDAKRIEDITEQLTELAGTFGYAFADVRPQFVRNKDELTMDVTLVISEAPRVYVERVDVNGNTLTQDK
VIRREMRVAEGDAFNSLAVKRSTNRINSLGFFQEGFEIEQAETADPDRIILEANVEEQPTGELQLSAGFSSIESFLLAAS
IRQRNFRGRGQTVGAGVQWSRFSRSANLSFTEPYVFDRNISAGIDLYRRDINSFNFVGRDRNTTFEQSTTGAQLRLGVPL
TEYFTLIGSYTLNIDDITLDENTFFADFDGDGVRTCEPLLAGRFLCDVIGSRTSSILGANLIYDTLNSRFRPSAGEQATL
AVNFAGLGGDVKYIKAELRARKFWRVLGNFIFSLSAEGGYIKGLEDRGGPGVDDVLLTDRFFLGEPQIRGFDIRGVGPRV
LRQPILDDGSGNPVVITDRNRISDDAIGGNTYYLGRAELEIPLGSGAADLGLRPSVFVDVGALFNVTAPTLTQSPFPGGL
SFQVRDASGNPLFISEDGLPTLETVDSNGNPLSPLNQTIDPFQEVFLGDSASPRVSVGIGVNWNSPFGPFRIDFAHVLKK
QPGDDTKRFSFNVGTQF

Sequences:

>Translated_897_residues
MNGTAKGPAPVSRKTGQWAFALLSSTMLAGIPAGVLAQDTTIPTTSANTAQPAPAPAPQPQGDIIQTIAVQGAQRLEPQT
ILTYIDIRPGQEYTQVLADQALKDLYQTELFANASVRNENGNVVIEVTENPVINRIILEGNKRLKNDKIVPEIKLAPRQI
FTRSKVRADVARIIELYKRQGRFAATVEPKTVQLSQNRVDLVFEITEGPKSKVRQINIIGNEVFSDGDLKGEMVTKESRL
VNFFSGNTSYDPDRLAFDQQKLREFYLTEGYVDFRVVSAVAELTPDKEDFIITYVVEEGERYKFGDVKVDSNLRDFDSDT
MTRQLNIESGAWYDAKRIEDITEQLTELAGTFGYAFADVRPQFVRNKDELTMDVTLVISEAPRVYVERVDVNGNTLTQDK
VIRREMRVAEGDAFNSLAVKRSTNRINSLGFFQEGFEIEQAETADPDRIILEANVEEQPTGELQLSAGFSSIESFLLAAS
IRQRNFRGRGQTVGAGVQWSRFSRSANLSFTEPYVFDRNISAGIDLYRRDINSFNFVGRDRNTTFEQSTTGAQLRLGVPL
TEYFTLIGSYTLNIDDITLDENTFFADFDGDGVRTCEPLLAGRFLCDVIGSRTSSILGANLIYDTLNSRFRPSAGEQATL
AVNFAGLGGDVKYIKAELRARKFWRVLGNFIFSLSAEGGYIKGLEDRGGPGVDDVLLTDRFFLGEPQIRGFDIRGVGPRV
LRQPILDDGSGNPVVITDRNRISDDAIGGNTYYLGRAELEIPLGSGAADLGLRPSVFVDVGALFNVTAPTLTQSPFPGGL
SFQVRDASGNPLFISEDGLPTLETVDSNGNPLSPLNQTIDPFQEVFLGDSASPRVSVGIGVNWNSPFGPFRIDFAHVLKK
QPGDDTKRFSFNVGTQF
>Mature_897_residues
MNGTAKGPAPVSRKTGQWAFALLSSTMLAGIPAGVLAQDTTIPTTSANTAQPAPAPAPQPQGDIIQTIAVQGAQRLEPQT
ILTYIDIRPGQEYTQVLADQALKDLYQTELFANASVRNENGNVVIEVTENPVINRIILEGNKRLKNDKIVPEIKLAPRQI
FTRSKVRADVARIIELYKRQGRFAATVEPKTVQLSQNRVDLVFEITEGPKSKVRQINIIGNEVFSDGDLKGEMVTKESRL
VNFFSGNTSYDPDRLAFDQQKLREFYLTEGYVDFRVVSAVAELTPDKEDFIITYVVEEGERYKFGDVKVDSNLRDFDSDT
MTRQLNIESGAWYDAKRIEDITEQLTELAGTFGYAFADVRPQFVRNKDELTMDVTLVISEAPRVYVERVDVNGNTLTQDK
VIRREMRVAEGDAFNSLAVKRSTNRINSLGFFQEGFEIEQAETADPDRIILEANVEEQPTGELQLSAGFSSIESFLLAAS
IRQRNFRGRGQTVGAGVQWSRFSRSANLSFTEPYVFDRNISAGIDLYRRDINSFNFVGRDRNTTFEQSTTGAQLRLGVPL
TEYFTLIGSYTLNIDDITLDENTFFADFDGDGVRTCEPLLAGRFLCDVIGSRTSSILGANLIYDTLNSRFRPSAGEQATL
AVNFAGLGGDVKYIKAELRARKFWRVLGNFIFSLSAEGGYIKGLEDRGGPGVDDVLLTDRFFLGEPQIRGFDIRGVGPRV
LRQPILDDGSGNPVVITDRNRISDDAIGGNTYYLGRAELEIPLGSGAADLGLRPSVFVDVGALFNVTAPTLTQSPFPGGL
SFQVRDASGNPLFISEDGLPTLETVDSNGNPLSPLNQTIDPFQEVFLGDSASPRVSVGIGVNWNSPFGPFRIDFAHVLKK
QPGDDTKRFSFNVGTQF

Specific function: Unknown

COG id: COG4775

COG function: function code M; Outer membrane protein/protective antigen OMA87

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen D15 family [H]

Homologues:

Organism=Escherichia coli, GI1786374, Length=876, Percent_Identity=24.4292237442922, Blast_Score=244, Evalue=1e-65,

Paralogues:

None

Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR016474
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 99046; Mature: 99046

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGTAKGPAPVSRKTGQWAFALLSSTMLAGIPAGVLAQDTTIPTTSANTAQPAPAPAPQP
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCC
QGDIIQTIAVQGAQRLEPQTILTYIDIRPGQEYTQVLADQALKDLYQTELFANASVRNEN
CCHHHHHHHHCCHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCEEECCC
GNVVIEVTENPVINRIILEGNKRLKNDKIVPEIKLAPRQIFTRSKVRADVARIIELYKRQ
CCEEEEECCCCCEEEEEECCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHC
GRFAATVEPKTVQLSQNRVDLVFEITEGPKSKVRQINIIGNEVFSDGDLKGEMVTKESRL
CCEEEEECCCEEEECCCCEEEEEEECCCCCCCCEEEEEECCEEECCCCCCCEEEECCCCE
VNFFSGNTSYDPDRLAFDQQKLREFYLTEGYVDFRVVSAVAELTPDKEDFIITYVVEEGE
EEEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCC
RYKFGDVKVDSNLRDFDSDTMTRQLNIESGAWYDAKRIEDITEQLTELAGTFGYAFADVR
EEEECCEEECCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PQFVRNKDELTMDVTLVISEAPRVYVERVDVNGNTLTQDKVIRREMRVAEGDAFNSLAVK
HHHHCCCCCEEEEEEEEEECCCEEEEEEEECCCCEECHHHHHHHHHHHHCCCCCCCEEEE
RSTNRINSLGFFQEGFEIEQAETADPDRIILEANVEEQPTGELQLSAGFSSIESFLLAAS
CCCCHHHHCCCHHCCCEECCCCCCCCCEEEEEECCCCCCCCCEEEECCHHHHHHHHHHHH
IRQRNFRGRGQTVGAGVQWSRFSRSANLSFTEPYVFDRNISAGIDLYRRDINSFNFVGRD
HHHCCCCCCCCEECCCCCHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHCCCCEEECCC
RNTTFEQSTTGAQLRLGVPLTEYFTLIGSYTLNIDDITLDENTFFADFDGDGVRTCEPLL
CCCCCCCCCCCCEEEECCCHHHHHHHHHCEEEEEEEEEECCCEEEEECCCCCCCHHHHHH
AGRFLCDVIGSRTSSILGANLIYDTLNSRFRPSAGEQATLAVNFAGLGGDVKYIKAELRA
HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHH
RKFWRVLGNFIFSLSAEGGYIKGLEDRGGPGVDDVLLTDRFFLGEPQIRGFDIRGVGPRV
HHHHHHHHHHHEEECCCCCEEECCCCCCCCCCCCEEEECEEECCCCCCCEEEECCCCHHH
LRQPILDDGSGNPVVITDRNRISDDAIGGNTYYLGRAELEIPLGSGAADLGLRPSVFVDV
HHCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCEEEEE
GALFNVTAPTLTQSPFPGGLSFQVRDASGNPLFISEDGLPTLETVDSNGNPLSPLNQTID
CHHEECCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCEEEECCCCCCCCHHHHHHH
PFQEVFLGDSASPRVSVGIGVNWNSPFGPFRIDFAHVLKKQPGDDTKRFSFNVGTQF
HHHHHHCCCCCCCEEEEEEEECCCCCCCCEEECHHHHHHCCCCCCCEEEEEECCCCC
>Mature Secondary Structure
MNGTAKGPAPVSRKTGQWAFALLSSTMLAGIPAGVLAQDTTIPTTSANTAQPAPAPAPQP
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCC
QGDIIQTIAVQGAQRLEPQTILTYIDIRPGQEYTQVLADQALKDLYQTELFANASVRNEN
CCHHHHHHHHCCHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCEEECCC
GNVVIEVTENPVINRIILEGNKRLKNDKIVPEIKLAPRQIFTRSKVRADVARIIELYKRQ
CCEEEEECCCCCEEEEEECCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHC
GRFAATVEPKTVQLSQNRVDLVFEITEGPKSKVRQINIIGNEVFSDGDLKGEMVTKESRL
CCEEEEECCCEEEECCCCEEEEEEECCCCCCCCEEEEEECCEEECCCCCCCEEEECCCCE
VNFFSGNTSYDPDRLAFDQQKLREFYLTEGYVDFRVVSAVAELTPDKEDFIITYVVEEGE
EEEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCC
RYKFGDVKVDSNLRDFDSDTMTRQLNIESGAWYDAKRIEDITEQLTELAGTFGYAFADVR
EEEECCEEECCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PQFVRNKDELTMDVTLVISEAPRVYVERVDVNGNTLTQDKVIRREMRVAEGDAFNSLAVK
HHHHCCCCCEEEEEEEEEECCCEEEEEEEECCCCEECHHHHHHHHHHHHCCCCCCCEEEE
RSTNRINSLGFFQEGFEIEQAETADPDRIILEANVEEQPTGELQLSAGFSSIESFLLAAS
CCCCHHHHCCCHHCCCEECCCCCCCCCEEEEEECCCCCCCCCEEEECCHHHHHHHHHHHH
IRQRNFRGRGQTVGAGVQWSRFSRSANLSFTEPYVFDRNISAGIDLYRRDINSFNFVGRD
HHHCCCCCCCCEECCCCCHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHCCCCEEECCC
RNTTFEQSTTGAQLRLGVPLTEYFTLIGSYTLNIDDITLDENTFFADFDGDGVRTCEPLL
CCCCCCCCCCCCEEEECCCHHHHHHHHHCEEEEEEEEEECCCEEEEECCCCCCCHHHHHH
AGRFLCDVIGSRTSSILGANLIYDTLNSRFRPSAGEQATLAVNFAGLGGDVKYIKAELRA
HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHH
RKFWRVLGNFIFSLSAEGGYIKGLEDRGGPGVDDVLLTDRFFLGEPQIRGFDIRGVGPRV
HHHHHHHHHHHEEECCCCCEEECCCCCCCCCCCCEEEECEEECCCCCCCEEEECCCCHHH
LRQPILDDGSGNPVVITDRNRISDDAIGGNTYYLGRAELEIPLGSGAADLGLRPSVFVDV
HHCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCEEEEE
GALFNVTAPTLTQSPFPGGLSFQVRDASGNPLFISEDGLPTLETVDSNGNPLSPLNQTID
CHHEECCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCEEEECCCCCCCCHHHHHHH
PFQEVFLGDSASPRVSVGIGVNWNSPFGPFRIDFAHVLKKQPGDDTKRFSFNVGTQF
HHHHHHCCCCCCCEEEEEEEECCCCCCCCEEECHHHHHHCCCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]