| Definition | Erythrobacter litoralis HTCC2594 chromosome, complete genome. |
|---|---|
| Accession | NC_007722 |
| Length | 3,052,398 |
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The map label for this gene is 85373551
Identifier: 85373551
GI number: 85373551
Start: 747545
End: 748114
Strand: Reverse
Name: 85373551
Synonym: ELI_03620
Alternate gene names: NA
Gene position: 748114-747545 (Counterclockwise)
Preceding gene: 85373552
Following gene: 85373549
Centisome position: 24.51
GC content: 62.28
Gene sequence:
>570_bases ATGAGCCTGCAAGCCGAGATTGCGGCGTGCCGCATCTGCGCTGACAAGCTGGCTCACGATCCGCGACCGGTGGCCACATT CAGCTCCACGGCGCGTTTGCTGATTATCGGCCAGGCGCCGGGCTCTGCGGTCCATGCCAGCGGCATTCCGTGGGACGATC CGAGCGGCGACCGCCTGCGCGAATGGGCAGGGATCGACAAAGCGACGATGTACGATCCTGCGCGCGTCGCGCTGGTGCCA ATGGGCTTCTGCTATCCCGGCAAGGGCAAAAGCGGAGACCTGCCACCACGTCCCGAATGCGCGCCAGCATGGCACGAACG GGTGCTCGCAGAGCTTCCGTGCGACCGGCTGACCCTGCTGGTGGGAAGCTACGCGCAGGCTTATTATCTGCCCGATACTC GCAAACAAACGCTGGCAGAGCGCGTGCGCGAGTTCGAAACATTCCTGCCGGTATTCTTTCCGCTACCGCATCCATCGTGG CGCAGCACGCTGTTCATGCGAAAAAACCCCTGGTTCGAGAAGGACGTTTTACCCGTTCTCAAGCGAAGAATTGCAGAGGC GATCCGCTAG
Upstream 100 bases:
>100_bases CACAGCGCTTTGCCGATATTTCCAAGGGCGTCGAAAATGCACGGAGCGAGAAGGACGCGGCCGAGGAGCGCTGGCTGGAG CTCGCGGAACTGGTCGAGGG
Downstream 100 bases:
>100_bases GCTGCCCATACAGAAAACGCATCTCGCCGGATCCTCTTGCAGCTACCGGATGCGATAAAAATCGGCGACCCGGTCGAGCG CGATCCTGAGTACCAGTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MSLQAEIAACRICADKLAHDPRPVATFSSTARLLIIGQAPGSAVHASGIPWDDPSGDRLREWAGIDKATMYDPARVALVP MGFCYPGKGKSGDLPPRPECAPAWHERVLAELPCDRLTLLVGSYAQAYYLPDTRKQTLAERVREFETFLPVFFPLPHPSW RSTLFMRKNPWFEKDVLPVLKRRIAEAIR
Sequences:
>Translated_189_residues MSLQAEIAACRICADKLAHDPRPVATFSSTARLLIIGQAPGSAVHASGIPWDDPSGDRLREWAGIDKATMYDPARVALVP MGFCYPGKGKSGDLPPRPECAPAWHERVLAELPCDRLTLLVGSYAQAYYLPDTRKQTLAERVREFETFLPVFFPLPHPSW RSTLFMRKNPWFEKDVLPVLKRRIAEAIR >Mature_188_residues SLQAEIAACRICADKLAHDPRPVATFSSTARLLIIGQAPGSAVHASGIPWDDPSGDRLREWAGIDKATMYDPARVALVPM GFCYPGKGKSGDLPPRPECAPAWHERVLAELPCDRLTLLVGSYAQAYYLPDTRKQTLAERVREFETFLPVFFPLPHPSWR STLFMRKNPWFEKDVLPVLKRRIAEAIR
Specific function: Unknown
COG id: COG1573
COG function: function code L; Uracil-DNA glycosylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005122 [H]
Pfam domain/function: PF03167 UDG [H]
EC number: NA
Molecular weight: Translated: 21199; Mature: 21068
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLQAEIAACRICADKLAHDPRPVATFSSTARLLIIGQAPGSAVHASGIPWDDPSGDRLR CCCHHHHHHHHHHHHHHCCCCCCCEECCCCEEEEEEECCCCCCEECCCCCCCCCCCHHHH EWAGIDKATMYDPARVALVPMGFCYPGKGKSGDLPPRPECAPAWHERVLAELPCDRLTLL HHHCCCCHHCCCCCEEEEEEECEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHH VGSYAQAYYLPDTRKQTLAERVREFETFLPVFFPLPHPSWRSTLFMRKNPWFEKDVLPVL HHCHHHEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEEECCCCCCCHHHHHHH KRRIAEAIR HHHHHHHCC >Mature Secondary Structure SLQAEIAACRICADKLAHDPRPVATFSSTARLLIIGQAPGSAVHASGIPWDDPSGDRLR CCHHHHHHHHHHHHHHCCCCCCCEECCCCEEEEEEECCCCCCEECCCCCCCCCCCHHHH EWAGIDKATMYDPARVALVPMGFCYPGKGKSGDLPPRPECAPAWHERVLAELPCDRLTLL HHHCCCCHHCCCCCEEEEEEECEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHH VGSYAQAYYLPDTRKQTLAERVREFETFLPVFFPLPHPSWRSTLFMRKNPWFEKDVLPVL HHCHHHEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEEECCCCCCCHHHHHHH KRRIAEAIR HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]