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The map label for this gene is secF [H]

Identifier: 85373547

GI number: 85373547

Start: 744178

End: 745158

Strand: Direct

Name: secF [H]

Synonym: ELI_03600

Alternate gene names: 85373547

Gene position: 744178-745158 (Clockwise)

Preceding gene: 85373546

Following gene: 85373550

Centisome position: 24.38

GC content: 62.08

Gene sequence:

>981_bases
ATGAAACTGCTGAAGCTCGTCCCCGACGATACCAATATCAAATTCCTCAAATGGCGCGTGCCGTTTTATGTCGTCAGCCT
GCTGCTGATGGCGGCGAGCTGGGCATTGGTGTTCACCAACGGCCTCAATTACGGGGTCGACTTCGCCGGTGGTCAGGAGA
TTCGCGCGACTTTCGTGGGCGAGGAAACCGCGCCGGTCCCGGAAGTGCGCCAGACGCTGACCGCTATCGAAGGCGTCGGC
GACCCGGTGGTGCAGCGCTTCGGCGAGCCCAACGAGATCTCGATCCGGGTCAAGCTGCCGCCCGAGGCCGAGGGCGACAA
GGAATTCGCCGACCGGCTGACGCGCGAGATCACCGCCGCACTGCGGGACGATCACCCGCAGGTCCGCATAGACGGGGTGG
ATTCGGTCTCGGGCAAGGTTTCGGGCGAATTCCGCGAGACCGCACTTTACGCCCTGCTCGCCGCGATGATCGCGATCTCG
ATCTATATCTGGGTGCGCTTCGAATGGCAGTTTGGCGTGGGCGCGATGTTCGCGCTGGTCCACGACGTCTCGCTGACGCT
CGGCATGTTCGCGCTGTTCCAGCTCGAATTCAGCCTCCAGATCATCGCCGCCATCCTCGCCATCATCGGCTACTCGCTCA
ACGACACGATCGTCGTCTACGACCGCATACGAGAGAACCTGAAGAAATTCCGCAAAATGCCGATCCCCGAACTTCTCGAC
CTTTCCGTCAACGAAACGCTGGCGCGGACGGTGATGACCAGTCTGACGCTGCTGATCGCGCTGCTGCCGCTGTTGCTGTT
CGGTCCGGCGAGCCTGTTCGGGCTGGTCGCGGCCATCACGCTTGGTATCTTCGTGGGGACCTATAGCTCGGTCTATATGG
CGGCGCCGATCCTGATCTGGCTGGGCGTGGATTCCGACAGCTTCGTGCCGCAGGAAAGCGAGGCCGACGTGCAGGATAGA
AAGGCGCGTGGCCAAGCCTGA

Upstream 100 bases:

>100_bases
TCACCAGCGTCTTTACCGCCGTCACCCTGACCCGCCTGTGGGTCGCCGGCTGGCTGCGCAAGGCGCGGCCGTCAGAGCTC
TACGTGTAAGGAGGCGGACG

Downstream 100 bases:

>100_bases
GGTCTGGCGGGCTATTCGTCGAGAATGCGGTCGTAATATTCGGCCAAATTCGCGCCGTTGACCTTCCAGTCGAAGCGCTC
CGCCATCGCCGCCGCTGCGG

Product: preprotein translocase subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MKLLKLVPDDTNIKFLKWRVPFYVVSLLLMAASWALVFTNGLNYGVDFAGGQEIRATFVGEETAPVPEVRQTLTAIEGVG
DPVVQRFGEPNEISIRVKLPPEAEGDKEFADRLTREITAALRDDHPQVRIDGVDSVSGKVSGEFRETALYALLAAMIAIS
IYIWVRFEWQFGVGAMFALVHDVSLTLGMFALFQLEFSLQIIAAILAIIGYSLNDTIVVYDRIRENLKKFRKMPIPELLD
LSVNETLARTVMTSLTLLIALLPLLLFGPASLFGLVAAITLGIFVGTYSSVYMAAPILIWLGVDSDSFVPQESEADVQDR
KARGQA

Sequences:

>Translated_326_residues
MKLLKLVPDDTNIKFLKWRVPFYVVSLLLMAASWALVFTNGLNYGVDFAGGQEIRATFVGEETAPVPEVRQTLTAIEGVG
DPVVQRFGEPNEISIRVKLPPEAEGDKEFADRLTREITAALRDDHPQVRIDGVDSVSGKVSGEFRETALYALLAAMIAIS
IYIWVRFEWQFGVGAMFALVHDVSLTLGMFALFQLEFSLQIIAAILAIIGYSLNDTIVVYDRIRENLKKFRKMPIPELLD
LSVNETLARTVMTSLTLLIALLPLLLFGPASLFGLVAAITLGIFVGTYSSVYMAAPILIWLGVDSDSFVPQESEADVQDR
KARGQA
>Mature_326_residues
MKLLKLVPDDTNIKFLKWRVPFYVVSLLLMAASWALVFTNGLNYGVDFAGGQEIRATFVGEETAPVPEVRQTLTAIEGVG
DPVVQRFGEPNEISIRVKLPPEAEGDKEFADRLTREITAALRDDHPQVRIDGVDSVSGKVSGEFRETALYALLAAMIAIS
IYIWVRFEWQFGVGAMFALVHDVSLTLGMFALFQLEFSLQIIAAILAIIGYSLNDTIVVYDRIRENLKKFRKMPIPELLD
LSVNETLARTVMTSLTLLIALLPLLLFGPASLFGLVAAITLGIFVGTYSSVYMAAPILIWLGVDSDSFVPQESEADVQDR
KARGQA

Specific function: Involved in protein export [H]

COG id: COG0341

COG function: function code U; Preprotein translocase subunit SecF

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family. SecF subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786610, Length=307, Percent_Identity=35.1791530944625, Blast_Score=190, Evalue=1e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022813
- InterPro:   IPR022646
- InterPro:   IPR022645
- InterPro:   IPR005665 [H]

Pfam domain/function: PF07549 Sec_GG; PF02355 SecD_SecF [H]

EC number: NA

Molecular weight: Translated: 35988; Mature: 35988

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLKLVPDDTNIKFLKWRVPFYVVSLLLMAASWALVFTNGLNYGVDFAGGQEIRATFVG
CCCEEECCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCEEEEEEEC
EETAPVPEVRQTLTAIEGVGDPVVQRFGEPNEISIRVKLPPEAEGDKEFADRLTREITAA
CCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHH
LRDDHPQVRIDGVDSVSGKVSGEFRETALYALLAAMIAISIYIWVRFEWQFGVGAMFALV
HHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEEEEECCHHHHHHHH
HDVSLTLGMFALFQLEFSLQIIAAILAIIGYSLNDTIVVYDRIRENLKKFRKMPIPELLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHCCCCCHHHC
LSVNETLARTVMTSLTLLIALLPLLLFGPASLFGLVAAITLGIFVGTYSSVYMAAPILIW
CCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
LGVDSDSFVPQESEADVQDRKARGQA
EECCCCCCCCCCCCCCHHHHHCCCCC
>Mature Secondary Structure
MKLLKLVPDDTNIKFLKWRVPFYVVSLLLMAASWALVFTNGLNYGVDFAGGQEIRATFVG
CCCEEECCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCEEEEEEEC
EETAPVPEVRQTLTAIEGVGDPVVQRFGEPNEISIRVKLPPEAEGDKEFADRLTREITAA
CCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHH
LRDDHPQVRIDGVDSVSGKVSGEFRETALYALLAAMIAISIYIWVRFEWQFGVGAMFALV
HHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEEEEECCHHHHHHHH
HDVSLTLGMFALFQLEFSLQIIAAILAIIGYSLNDTIVVYDRIRENLKKFRKMPIPELLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHCCCCCHHHC
LSVNETLARTVMTSLTLLIALLPLLLFGPASLFGLVAAITLGIFVGTYSSVYMAAPILIW
CCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
LGVDSDSFVPQESEADVQDRKARGQA
EECCCCCCCCCCCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9175857 [H]