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The map label for this gene is ywhC [H]

Identifier: 85373526

GI number: 85373526

Start: 721029

End: 721709

Strand: Direct

Name: ywhC [H]

Synonym: ELI_03495

Alternate gene names: 85373526

Gene position: 721029-721709 (Clockwise)

Preceding gene: 85373525

Following gene: 85373531

Centisome position: 23.62

GC content: 63.58

Gene sequence:

>681_bases
ATGACCGATACCATCATGCTGGCTGCGATCCTGATCCCGGGATTGATCATCGCCATCGTCTTCCACGAAGTCGCGCACGG
CTGGACTGCGCTGATACTGGGCGATCCGACTGCGAAAGAGCAGCGGCGGCTCAGCCTCAACCCGATCCGGCATGTCGATC
CGGTCGGCACGCTGCTGGTGCCGGGCTTCCTGCTGGCGGTGGGCGGGCCGGTGTTCGGCTGGGCCAAGCCGGTGCCGGTA
CTCAAGAACCGGCTCGACAATCCGCGTTTCGGGATGATGGCGGTGGCTGCGGCGGGGCCTGGGACGAACATCGTCCTGGC
CTTGATCGCGGCAATCGCGCTCGGCCTGCTGGCACCCGCGCTGACATTGGAGGTCGCGGGCGAGCCGACCCTGATCGCGC
AGGCGTTCTTCTATTTCATCCTCATCAATGTCTTCCTTGCCTTTTTCAACCTGCTGCCGATCCCGCCATTCGACGGTTCG
CATATTCTCGAAGGTCTGCTGCCGCCGTCGCTGGCGAAGCACTACGATCGGCTGCGACCGATCGGCATGCTGCTGTTCTT
CGGACTGATCGCGCTGACGTGGTTCGCACCGGAACTGGGCGTCATCGAAAAGACGGTCGGCCCGCCGGTCGACTGGATGA
TGCAGCAGTTCCTGGGTCTGGCTTCGGCTATCGCGGCTTAG

Upstream 100 bases:

>100_bases
GCAGACCGAGATCGGCGGAAACGATCGTTACCTTGCGCTGTGCCGCAAGCATTTCAGCCAGGCGTTGGCGGATTAGCAAC
GCCATCCCTATCTTCCCGTC

Downstream 100 bases:

>100_bases
CCGTCATCCGCCGATATGAGCGATGTATCGCGCCTTGGGATGGCGTTCGACAAGGCGTGCCTGCCATTCCTCGCGCTGCC
GGGACGAGACGCAGGCGACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MTDTIMLAAILIPGLIIAIVFHEVAHGWTALILGDPTAKEQRRLSLNPIRHVDPVGTLLVPGFLLAVGGPVFGWAKPVPV
LKNRLDNPRFGMMAVAAAGPGTNIVLALIAAIALGLLAPALTLEVAGEPTLIAQAFFYFILINVFLAFFNLLPIPPFDGS
HILEGLLPPSLAKHYDRLRPIGMLLFFGLIALTWFAPELGVIEKTVGPPVDWMMQQFLGLASAIAA

Sequences:

>Translated_226_residues
MTDTIMLAAILIPGLIIAIVFHEVAHGWTALILGDPTAKEQRRLSLNPIRHVDPVGTLLVPGFLLAVGGPVFGWAKPVPV
LKNRLDNPRFGMMAVAAAGPGTNIVLALIAAIALGLLAPALTLEVAGEPTLIAQAFFYFILINVFLAFFNLLPIPPFDGS
HILEGLLPPSLAKHYDRLRPIGMLLFFGLIALTWFAPELGVIEKTVGPPVDWMMQQFLGLASAIAA
>Mature_225_residues
TDTIMLAAILIPGLIIAIVFHEVAHGWTALILGDPTAKEQRRLSLNPIRHVDPVGTLLVPGFLLAVGGPVFGWAKPVPVL
KNRLDNPRFGMMAVAAAGPGTNIVLALIAAIALGLLAPALTLEVAGEPTLIAQAFFYFILINVFLAFFNLLPIPPFDGSH
ILEGLLPPSLAKHYDRLRPIGMLLFFGLIALTWFAPELGVIEKTVGPPVDWMMQQFLGLASAIAA

Specific function: Unknown

COG id: COG1994

COG function: function code R; Zn-dependent proteases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M50B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008915 [H]

Pfam domain/function: PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 24179; Mature: 24048

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDTIMLAAILIPGLIIAIVFHEVAHGWTALILGDPTAKEQRRLSLNPIRHVDPVGTLLV
CCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHCCCCCCCHHCCHHHHHHH
PGFLLAVGGPVFGWAKPVPVLKNRLDNPRFGMMAVAAAGPGTNIVLALIAAIALGLLAPA
HHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHH
LTLEVAGEPTLIAQAFFYFILINVFLAFFNLLPIPPFDGSHILEGLLPPSLAKHYDRLRP
HHHEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHH
IGMLLFFGLIALTWFAPELGVIEKTVGPPVDWMMQQFLGLASAIAA
HHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TDTIMLAAILIPGLIIAIVFHEVAHGWTALILGDPTAKEQRRLSLNPIRHVDPVGTLLV
CHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHCCCCCCCHHCCHHHHHHH
PGFLLAVGGPVFGWAKPVPVLKNRLDNPRFGMMAVAAAGPGTNIVLALIAAIALGLLAPA
HHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHH
LTLEVAGEPTLIAQAFFYFILINVFLAFFNLLPIPPFDGSHILEGLLPPSLAKHYDRLRP
HHHEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHH
IGMLLFFGLIALTWFAPELGVIEKTVGPPVDWMMQQFLGLASAIAA
HHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]