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The map label for this gene is yomI [H]

Identifier: 85373469

GI number: 85373469

Start: 677920

End: 678561

Strand: Direct

Name: yomI [H]

Synonym: ELI_03210

Alternate gene names: 85373469

Gene position: 677920-678561 (Clockwise)

Preceding gene: 85373468

Following gene: 85373470

Centisome position: 22.21

GC content: 63.4

Gene sequence:

>642_bases
ATGGAGGGCTCGATGATTCTCGTGAGATCGGGCCGGCTTGCCTTTTTTGCTATGCTGGCTTCGATATCCGCTCCTGCATG
GGCGGACGTCATGGAAATTGGTGACGATGGTGCGCGCTGGGTTGCCGGCGGCGTTGCGGCTGCCCCTGGCTCGACCGAAT
TGTCCGCCGGATATGCAATCGTGCCCGAAAGTGTCGCGGGCCTGCCTGTGACGGTAACGACCGATCCGCGACTGACTGCG
CGCGGTGTGCCGGTGGCGTATCAGGCCAAGGTGCAGGAACTCTCTCACCGGTTCGACCTCAGCCCGAGCCTGATCGAAGC
GTTGGTCTGGCAGGAAAGCCGCTGGCGCGAAAAGGCTGTCTCGCATGCCGGCGCGCGGGGGCTGGCGCAATTGATGCCCG
GCACCGCGCGCTATCTCGGCGTCGATCCGGACGATCCCTTTGCCAATCTCGAAGGCGGTGCCCGCTATCTGCGCGAACAG
CTCGACCGTTTCGACGGCGACCTGGAAAAGGCATTGGCCGCCTACAACGCGGGGCCGGGCCGAGTGCTCGCAGCGCGCGG
CATTCCGAACATTCGCGAAACGAAACATTACGTGGCGGCCATCATGGGGCGCCTCTCCAATCATTCCCGGAAGGATCAAT
AA

Upstream 100 bases:

>100_bases
CGCGGCATCTCGCTGCGGGCCGTTTACTCTATGCGGTAACCGGACTTGGCCTTCATTTGCTGTCACTCGCATGTCATGCA
AAAAGGCGATGGGGTCGTAT

Downstream 100 bases:

>100_bases
TCGATGGGTTCGCTTTCCCGCCTCGCCGCGCTTGCGGCACTGGTGACACCGACGGCGCTTCTTGCCCAGACCCAGCAGGC
TGCCGACCCTGCGGGCTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MEGSMILVRSGRLAFFAMLASISAPAWADVMEIGDDGARWVAGGVAAAPGSTELSAGYAIVPESVAGLPVTVTTDPRLTA
RGVPVAYQAKVQELSHRFDLSPSLIEALVWQESRWREKAVSHAGARGLAQLMPGTARYLGVDPDDPFANLEGGARYLREQ
LDRFDGDLEKALAAYNAGPGRVLAARGIPNIRETKHYVAAIMGRLSNHSRKDQ

Sequences:

>Translated_213_residues
MEGSMILVRSGRLAFFAMLASISAPAWADVMEIGDDGARWVAGGVAAAPGSTELSAGYAIVPESVAGLPVTVTTDPRLTA
RGVPVAYQAKVQELSHRFDLSPSLIEALVWQESRWREKAVSHAGARGLAQLMPGTARYLGVDPDDPFANLEGGARYLREQ
LDRFDGDLEKALAAYNAGPGRVLAARGIPNIRETKHYVAAIMGRLSNHSRKDQ
>Mature_213_residues
MEGSMILVRSGRLAFFAMLASISAPAWADVMEIGDDGARWVAGGVAAAPGSTELSAGYAIVPESVAGLPVTVTTDPRLTA
RGVPVAYQAKVQELSHRFDLSPSLIEALVWQESRWREKAVSHAGARGLAQLMPGTARYLGVDPDDPFANLEGGARYLREQ
LDRFDGDLEKALAAYNAGPGRVLAARGIPNIRETKHYVAAIMGRLSNHSRKDQ

Specific function: Unknown

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 10 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR008258
- InterPro:   IPR016047
- InterPro:   IPR010090
- InterPro:   IPR000189 [H]

Pfam domain/function: PF01551 Peptidase_M23; PF10145 PhageMin_Tail; PF01464 SLT [H]

EC number: NA

Molecular weight: Translated: 22812; Mature: 22812

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGSMILVRSGRLAFFAMLASISAPAWADVMEIGDDGARWVAGGVAAAPGSTELSAGYAI
CCCCEEEEECCCHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHCCEEECCCCCCCCCCEEE
VPESVAGLPVTVTTDPRLTARGVPVAYQAKVQELSHRFDLSPSLIEALVWQESRWREKAV
CCCCCCCCEEEEECCCCEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
SHAGARGLAQLMPGTARYLGVDPDDPFANLEGGARYLREQLDRFDGDLEKALAAYNAGPG
HHHCHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCC
RVLAARGIPNIRETKHYVAAIMGRLSNHSRKDQ
CEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MEGSMILVRSGRLAFFAMLASISAPAWADVMEIGDDGARWVAGGVAAAPGSTELSAGYAI
CCCCEEEEECCCHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHCCEEECCCCCCCCCCEEE
VPESVAGLPVTVTTDPRLTARGVPVAYQAKVQELSHRFDLSPSLIEALVWQESRWREKAV
CCCCCCCCEEEEECCCCEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
SHAGARGLAQLMPGTARYLGVDPDDPFANLEGGARYLREQLDRFDGDLEKALAAYNAGPG
HHHCHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCC
RVLAARGIPNIRETKHYVAAIMGRLSNHSRKDQ
CEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]