| Definition | Erythrobacter litoralis HTCC2594 chromosome, complete genome. |
|---|---|
| Accession | NC_007722 |
| Length | 3,052,398 |
Click here to switch to the map view.
The map label for this gene is 85373466
Identifier: 85373466
GI number: 85373466
Start: 672770
End: 675484
Strand: Reverse
Name: 85373466
Synonym: ELI_03195
Alternate gene names: NA
Gene position: 675484-672770 (Counterclockwise)
Preceding gene: 85373467
Following gene: 85373458
Centisome position: 22.13
GC content: 62.06
Gene sequence:
>2715_bases ATGTCCATCGGCAAGCAGTTGGCAGGATGGCTGCTTTTCACCACCGCACTGACATTCCCAGCTGCGGCATTGGCGCAAGA CACGGGCGCGCAAGACACGGGCGAAGAGCCCGATACGCCCCCCGCCGACACGCAAGAGGGCGCTCAAGATGACCCTCGGC AGGACCCTGTTGAAGACGAGGCTCCCGAGGTATCGATCCCCGGCGGCGGCAACGTCATTACCGTCACCGGTCGCCGCGGC CCGCGCGATATTACGCGCAGCTCGACACAGGTGGTCTCGGTTCTTTCGTCCGAAGACATCGCCCGCACCGGCGATGGCGA CATCGCCAGCGCCATCAGCCGCGTCACAGGCCTTTCCGATAACGGCGACGGGCGCGTGTTCGTGCGTGGCCTCGGCGATC GCTACTCGCTCGCGCTGCTGAACGGCCTGCCGCTACCGAGCCCCAACCCGCTCAGCCGCGTCGTACCGCTCGATATCTTT CCGACCGATATTATCGCCTCCAGCCTCGTCCAGAAGACCTATTCCGCCAACTTCCCCGGCGAGTTCGGCGGCGGTGTCAT CAATCTCACCACGCAGGCCGTGCCGGACGAAGGCTTCGTCAAGATCAATTTCGGCGTCAGCGGCGATTCGATCACGACGT TCGAGGACTCGATCCAGTATTACGGCACCCGCCTCGACAAGTTCGGCTTCACCACCGACCGCCGCGACCCGCCGCCCGAA TTGCAGCGCTTCCTGAATGGCGATACGCAGCTGTCCGACTTGACGCTCGCCGAGCAGCAGCGCATCGCCGTGCAACTCAA CGAGCCGAACCTCAACGTGGTCCAGCGCATCGGAAAGACGCGCCCGAATTTTTCCGGCGGTATCACGATGGGCGGCGCAG TCGATATCGAGGACGCCCGTCTCGGCGCGATTGCGACGTTCAATCTCAGCAACAGCTACCGCACTCGCAGCATCATCTCG CAGACGCCGGACGACCTCGATCTCAACCTGCGGACCGATTTCCGCGATTTCGTGACCGACAACCGCATCCTCGCCAACGG CCTCGTCGGTTTCGGACTCGAGGTAGGCAAACACCGGTTCCGCTGGACCAATGTCTATATCCGCGACGTACTCAAGCAGG CGGTGATCTCCGAAGGCGAGAACATCCAGGACGGCGATACCGAGCGGCAGCAGAAGACCGGCTGGTTCGAACGCCAGCTG ATCGACAGCCAGCTGATCGCGGAACTCGAATTCGGCGAGCTCGAATTCGACCTGCGCGGCGGCTATGCCCAGACCGACCG CGAGAGCCCGTACGAGTACGAGTTCCAGTATGTCCGCACCAACAATCCGGGCGATCCGACGGGCGAAATCTTCGTCAATC CGCTCAACCGCATCCGCGGCGACCTCGCCACGATCGCCTTTTCGGACCTGACCGAGAAGCTGTGGTACGGCGGCGTCGAC GTCACCTACCCGGTCATCCCCGATATCCTGTCGGTCACGGTGGGCGGCGCTTACAGCGACACCAGCCGAACCTCCTCGTT CCGCGAGTTCCTGTTCGATTCGGACTCCGATTTCCCCGCCGGGGTCGGCGCGCTGCGTCCCGACCTGCTGCTGGGCAATG CCATCATCGAATTTTTCGATGTCGGCCTGTTCGAAACCTCGCAGGTCTTCCCGGTCTTTGCCGCCGATCTCGAGACCAAG GCAGGTTACATCAAAGGTAACCTGACCCCTCTCGAAGGCCTGACCATCGATATCGGCGTACGCTACGAAGACGCGACGCA GTCGGTCGCGCCGGTGCAGGTCTTTGCCAACCAGCAGAACCTCGATGCGGTTACGCAGATCGCCAACGACTACTTTCTGC CCGCCGGCACGATTACCTACGATTTCGGCAATGGCTTCCAAGTCCGCGCGAGTGCGTCCAAGACTATCGCTCGCCCGCAA TTCCGCGAGCTGATCTTCCAGCCCTACACCGATCCCGAGAGCAACCGCACCTTTGTCGGCAACCCGGCGCTTCAGGACAG CGAACTGATCAATGCCGAACTGCGCGCCGAATACTATTTCGGTTCGGGCAGCCGCGCGGCTATCGCGGGCTTCTGGAAGA AGATCGACAATCCGATCGAGCCGTTCTCGGCTTTTACCGACAACGACCAGATCACCCAGTTCGCCAATGCGCCCGAAGCG ACGCTGTTTGGCGGCGAGGTCGAGCTGCAATGGAATTACGACCTGATCGACTTCGGTGGCTGGTTCGAAAGCAAGCGCGC GGTCGTCGTCGCCAACTACACCTACACCCAGTCGGAGCTGAAGGTGGACGCGGCTGACGAAACCTTTATCTTTTCTCCCG GCGTCGGTTCGGTCCCGCGTCCCGCGTCGGGCTTCTTCTTCGATGGGCGCCCGCTGACCGGGCAGTCGGACCATATCGGC AACCTGCAGCTGGGAATGGAGGATCTCGACAAGCTGCAGCAGGCGACCTTCATCATGTCCTATGCCAGCGAGCGCGTTAC CAGCCGCGGCGCGGGCGGTTTGCCCGATATCGTCGAAGATCCCGGCTTCAGGCTCGACTTCGTCGTGCGGCAGGGGATTA CGGTCGCGGGCGTTCCGCTGGAACTTAAGGCCGAAGCACGCAACATCACCGGACGCGACAATTTCGATTTCATCTCGTCC GGCGCCAACCGTATCGAGGTCAACACATACGAGGTCGGGCGCAGCTTCAGCTTCTCGATCTCGGCCGAATTCTAA
Upstream 100 bases:
>100_bases TGATCGCCTCCCTCCTTCCTCGCCCGACCATCGCACGCAGCCGGGCCCGGTGCCCGGCAAATGTGCACAAGCATTTCATT TTGTGACGGGATTTCAAACC
Downstream 100 bases:
>100_bases GCGGCAAAATAGAACACAAGACCTGCGGCCGCTCTTTCCGGGGCGGCCTTTTTTTCGACTACGGAGAAGCTCAGCGCGCG CTGGCGCGTTCGACAAGATG
Product: TonB-dependent receptor
Products: NA
Alternate protein names: NB-Dependent Receptor Plug; NB-Dependent Outer Membrane Receptor; Outer Membrane Protein; NB-Dependent Receptor Protein; Nb-Dependent Receptor; Nb-Dependent Receptor Plug; NB-Dependent Receptor-Like Protein; NB-Dependent Receptor Plug Domain Protein; NB-Dependent Receptor Domain Protein
Number of amino acids: Translated: 904; Mature: 903
Protein sequence:
>904_residues MSIGKQLAGWLLFTTALTFPAAALAQDTGAQDTGEEPDTPPADTQEGAQDDPRQDPVEDEAPEVSIPGGGNVITVTGRRG PRDITRSSTQVVSVLSSEDIARTGDGDIASAISRVTGLSDNGDGRVFVRGLGDRYSLALLNGLPLPSPNPLSRVVPLDIF PTDIIASSLVQKTYSANFPGEFGGGVINLTTQAVPDEGFVKINFGVSGDSITTFEDSIQYYGTRLDKFGFTTDRRDPPPE LQRFLNGDTQLSDLTLAEQQRIAVQLNEPNLNVVQRIGKTRPNFSGGITMGGAVDIEDARLGAIATFNLSNSYRTRSIIS QTPDDLDLNLRTDFRDFVTDNRILANGLVGFGLEVGKHRFRWTNVYIRDVLKQAVISEGENIQDGDTERQQKTGWFERQL IDSQLIAELEFGELEFDLRGGYAQTDRESPYEYEFQYVRTNNPGDPTGEIFVNPLNRIRGDLATIAFSDLTEKLWYGGVD VTYPVIPDILSVTVGGAYSDTSRTSSFREFLFDSDSDFPAGVGALRPDLLLGNAIIEFFDVGLFETSQVFPVFAADLETK AGYIKGNLTPLEGLTIDIGVRYEDATQSVAPVQVFANQQNLDAVTQIANDYFLPAGTITYDFGNGFQVRASASKTIARPQ FRELIFQPYTDPESNRTFVGNPALQDSELINAELRAEYYFGSGSRAAIAGFWKKIDNPIEPFSAFTDNDQITQFANAPEA TLFGGEVELQWNYDLIDFGGWFESKRAVVVANYTYTQSELKVDAADETFIFSPGVGSVPRPASGFFFDGRPLTGQSDHIG NLQLGMEDLDKLQQATFIMSYASERVTSRGAGGLPDIVEDPGFRLDFVVRQGITVAGVPLELKAEARNITGRDNFDFISS GANRIEVNTYEVGRSFSFSISAEF
Sequences:
>Translated_904_residues MSIGKQLAGWLLFTTALTFPAAALAQDTGAQDTGEEPDTPPADTQEGAQDDPRQDPVEDEAPEVSIPGGGNVITVTGRRG PRDITRSSTQVVSVLSSEDIARTGDGDIASAISRVTGLSDNGDGRVFVRGLGDRYSLALLNGLPLPSPNPLSRVVPLDIF PTDIIASSLVQKTYSANFPGEFGGGVINLTTQAVPDEGFVKINFGVSGDSITTFEDSIQYYGTRLDKFGFTTDRRDPPPE LQRFLNGDTQLSDLTLAEQQRIAVQLNEPNLNVVQRIGKTRPNFSGGITMGGAVDIEDARLGAIATFNLSNSYRTRSIIS QTPDDLDLNLRTDFRDFVTDNRILANGLVGFGLEVGKHRFRWTNVYIRDVLKQAVISEGENIQDGDTERQQKTGWFERQL IDSQLIAELEFGELEFDLRGGYAQTDRESPYEYEFQYVRTNNPGDPTGEIFVNPLNRIRGDLATIAFSDLTEKLWYGGVD VTYPVIPDILSVTVGGAYSDTSRTSSFREFLFDSDSDFPAGVGALRPDLLLGNAIIEFFDVGLFETSQVFPVFAADLETK AGYIKGNLTPLEGLTIDIGVRYEDATQSVAPVQVFANQQNLDAVTQIANDYFLPAGTITYDFGNGFQVRASASKTIARPQ FRELIFQPYTDPESNRTFVGNPALQDSELINAELRAEYYFGSGSRAAIAGFWKKIDNPIEPFSAFTDNDQITQFANAPEA TLFGGEVELQWNYDLIDFGGWFESKRAVVVANYTYTQSELKVDAADETFIFSPGVGSVPRPASGFFFDGRPLTGQSDHIG NLQLGMEDLDKLQQATFIMSYASERVTSRGAGGLPDIVEDPGFRLDFVVRQGITVAGVPLELKAEARNITGRDNFDFISS GANRIEVNTYEVGRSFSFSISAEF >Mature_903_residues SIGKQLAGWLLFTTALTFPAAALAQDTGAQDTGEEPDTPPADTQEGAQDDPRQDPVEDEAPEVSIPGGGNVITVTGRRGP RDITRSSTQVVSVLSSEDIARTGDGDIASAISRVTGLSDNGDGRVFVRGLGDRYSLALLNGLPLPSPNPLSRVVPLDIFP TDIIASSLVQKTYSANFPGEFGGGVINLTTQAVPDEGFVKINFGVSGDSITTFEDSIQYYGTRLDKFGFTTDRRDPPPEL QRFLNGDTQLSDLTLAEQQRIAVQLNEPNLNVVQRIGKTRPNFSGGITMGGAVDIEDARLGAIATFNLSNSYRTRSIISQ TPDDLDLNLRTDFRDFVTDNRILANGLVGFGLEVGKHRFRWTNVYIRDVLKQAVISEGENIQDGDTERQQKTGWFERQLI DSQLIAELEFGELEFDLRGGYAQTDRESPYEYEFQYVRTNNPGDPTGEIFVNPLNRIRGDLATIAFSDLTEKLWYGGVDV TYPVIPDILSVTVGGAYSDTSRTSSFREFLFDSDSDFPAGVGALRPDLLLGNAIIEFFDVGLFETSQVFPVFAADLETKA GYIKGNLTPLEGLTIDIGVRYEDATQSVAPVQVFANQQNLDAVTQIANDYFLPAGTITYDFGNGFQVRASASKTIARPQF RELIFQPYTDPESNRTFVGNPALQDSELINAELRAEYYFGSGSRAAIAGFWKKIDNPIEPFSAFTDNDQITQFANAPEAT LFGGEVELQWNYDLIDFGGWFESKRAVVVANYTYTQSELKVDAADETFIFSPGVGSVPRPASGFFFDGRPLTGQSDHIGN LQLGMEDLDKLQQATFIMSYASERVTSRGAGGLPDIVEDPGFRLDFVVRQGITVAGVPLELKAEARNITGRDNFDFISSG ANRIEVNTYEVGRSFSFSISAEF
Specific function: Unknown
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 98937; Mature: 98805
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIGKQLAGWLLFTTALTFPAAALAQDTGAQDTGEEPDTPPADTQEGAQDDPRQDPVEDE CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APEVSIPGGGNVITVTGRRGPRDITRSSTQVVSVLSSEDIARTGDGDIASAISRVTGLSD CCEEECCCCCCEEEEECCCCCCHHHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCC NGDGRVFVRGLGDRYSLALLNGLPLPSPNPLSRVVPLDIFPTDIIASSLVQKTYSANFPG CCCCEEEEEECCCCEEEEEECCCCCCCCCCCHHEEEEECCCHHHHHHHHHHHHHCCCCCC EFGGGVINLTTQAVPDEGFVKINFGVSGDSITTFEDSIQYYGTRLDKFGFTTDRRDPPPE CCCCCEEEEEEECCCCCCEEEEEECCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCHH LQRFLNGDTQLSDLTLAEQQRIAVQLNEPNLNVVQRIGKTRPNFSGGITMGGAVDIEDAR HHHHHCCCCCCHHEECCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCEEECCEEEECCCC LGAIATFNLSNSYRTRSIISQTPDDLDLNLRTDFRDFVTDNRILANGLVGFGLEVGKHRF CCEEEEEECCCCHHHHHHHHCCCCCCEEEECCCHHHHHCCCEEEECCHHHCCHHHCCCEE RWTNVYIRDVLKQAVISEGENIQDGDTERQQKTGWFERQLIDSQLIAELEFGELEFDLRG EEHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHEEECCCEEEEECC GYAQTDRESPYEYEFQYVRTNNPGDPTGEIFVNPLNRIRGDLATIAFSDLTEKLWYGGVD CCCCCCCCCCCEEEEEEEEECCCCCCCCCEEECCHHHHCHHHHHHHHHHHHHHHHCCCCC VTYPVIPDILSVTVGGAYSDTSRTSSFREFLFDSDSDFPAGVGALRPDLLLGNAIIEFFD EEHHHHHHHHHEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH VGLFETSQVFPVFAADLETKAGYIKGNLTPLEGLTIDIGVRYEDATQSVAPVQVFANQQN CCCCCCCCCCEEEEECCCCCCCEEECCCCCCCCEEEEEEEEECCCCCCCCEEEEECCCCC LDAVTQIANDYFLPAGTITYDFGNGFQVRASASKTIARPQFRELIFQPYTDPESNRTFVG HHHHHHHHHCCCCCCCEEEEECCCCEEEEECCCHHHCCHHHHHHHHCCCCCCCCCCEEEC NPALQDSELINAELRAEYYFGSGSRAAIAGFWKKIDNPIEPFSAFTDNDQITQFANAPEA CCCCCCHHHHCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCHHHCCCCCHHHHHCCCCCC TLFGGEVELQWNYDLIDFGGWFESKRAVVVANYTYTQSELKVDAADETFIFSPGVGSVPR EEECCEEEEEECCEEEECCCCCCCCCEEEEEEEEEECCCEEEECCCCEEEECCCCCCCCC PASGFFFDGRPLTGQSDHIGNLQLGMEDLDKLQQATFIMSYASERVTSRGAGGLPDIVED CCCCCEECCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCC PGFRLDFVVRQGITVAGVPLELKAEARNITGRDNFDFISSGANRIEVNTYEVGRSFSFSI CCCEEEEEECCCCEEECCCEEEEECCCCCCCCCCCHHHHCCCCEEEEEEEECCCEEEEEE SAEF EECC >Mature Secondary Structure SIGKQLAGWLLFTTALTFPAAALAQDTGAQDTGEEPDTPPADTQEGAQDDPRQDPVEDE CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APEVSIPGGGNVITVTGRRGPRDITRSSTQVVSVLSSEDIARTGDGDIASAISRVTGLSD CCEEECCCCCCEEEEECCCCCCHHHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCC NGDGRVFVRGLGDRYSLALLNGLPLPSPNPLSRVVPLDIFPTDIIASSLVQKTYSANFPG CCCCEEEEEECCCCEEEEEECCCCCCCCCCCHHEEEEECCCHHHHHHHHHHHHHCCCCCC EFGGGVINLTTQAVPDEGFVKINFGVSGDSITTFEDSIQYYGTRLDKFGFTTDRRDPPPE CCCCCEEEEEEECCCCCCEEEEEECCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCHH LQRFLNGDTQLSDLTLAEQQRIAVQLNEPNLNVVQRIGKTRPNFSGGITMGGAVDIEDAR HHHHHCCCCCCHHEECCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCEEECCEEEECCCC LGAIATFNLSNSYRTRSIISQTPDDLDLNLRTDFRDFVTDNRILANGLVGFGLEVGKHRF CCEEEEEECCCCHHHHHHHHCCCCCCEEEECCCHHHHHCCCEEEECCHHHCCHHHCCCEE RWTNVYIRDVLKQAVISEGENIQDGDTERQQKTGWFERQLIDSQLIAELEFGELEFDLRG EEHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHEEECCCEEEEECC GYAQTDRESPYEYEFQYVRTNNPGDPTGEIFVNPLNRIRGDLATIAFSDLTEKLWYGGVD CCCCCCCCCCCEEEEEEEEECCCCCCCCCEEECCHHHHCHHHHHHHHHHHHHHHHCCCCC VTYPVIPDILSVTVGGAYSDTSRTSSFREFLFDSDSDFPAGVGALRPDLLLGNAIIEFFD EEHHHHHHHHHEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH VGLFETSQVFPVFAADLETKAGYIKGNLTPLEGLTIDIGVRYEDATQSVAPVQVFANQQN CCCCCCCCCCEEEEECCCCCCCEEECCCCCCCCEEEEEEEEECCCCCCCCEEEEECCCCC LDAVTQIANDYFLPAGTITYDFGNGFQVRASASKTIARPQFRELIFQPYTDPESNRTFVG HHHHHHHHHCCCCCCCEEEEECCCCEEEEECCCHHHCCHHHHHHHHCCCCCCCCCCEEEC NPALQDSELINAELRAEYYFGSGSRAAIAGFWKKIDNPIEPFSAFTDNDQITQFANAPEA CCCCCCHHHHCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCHHHCCCCCHHHHHCCCCCC TLFGGEVELQWNYDLIDFGGWFESKRAVVVANYTYTQSELKVDAADETFIFSPGVGSVPR EEECCEEEEEECCEEEECCCCCCCCCEEEEEEEEEECCCEEEECCCCEEEECCCCCCCCC PASGFFFDGRPLTGQSDHIGNLQLGMEDLDKLQQATFIMSYASERVTSRGAGGLPDIVED CCCCCEECCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCC PGFRLDFVVRQGITVAGVPLELKAEARNITGRDNFDFISSGANRIEVNTYEVGRSFSFSI CCCEEEEEECCCCEEECCCEEEEECCCCCCCCCCCHHHHCCCCEEEEEEEECCCEEEEEE SAEF EECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA