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The map label for this gene is ssb [H]

Identifier: 85372866

GI number: 85372866

Start: 49127

End: 49657

Strand: Direct

Name: ssb [H]

Synonym: ELI_00195

Alternate gene names: 85372866

Gene position: 49127-49657 (Clockwise)

Preceding gene: 85372865

Following gene: 85372869

Centisome position: 1.61

GC content: 64.22

Gene sequence:

>531_bases
ATGGCGGGCTCGCTCAACAAGGTCATGCTGATCGGCAATCTGGGGCAGGACCCGGAAGTGCGCAGCTTCCAGAATGGCGG
CAAAGTCTGCAACCTGCGCATCGCCACCAGCGAGACGTGGAAGGATCGCAATAGCGGCGAGCGGCAGGAGCGCACCGAAT
GGCACACGGTCGCGATCTTTTCAGAAGGTCTCGTCAACGTCGCGGAGCGCTATCTCAAGAAAGGCTCCAAGGTTTACATC
GAAGGCCAGTTGCAGACTCGCAAGTGGCAGGACCAGAGCGGCAATGACCGCTATTCGACCGAAGTCGTGCTGCGCGGCTA
TAACGGCACGCTGACCATGCTCGACGGTGCCGGTGGCGGCCAAGGCGGTGGTGGCGGCGGAGGCTACGGTGGCGGTGGCC
AGCGCTCGGGCGGGAACAATGGCGGCTGGGATCAGGGCGGTGGTGGCCAAAGTGGCGGCCAGAGCGGCGGTGGCTCCGGC
GGCGGAGGCGGCTCGAACTACGACGATCTCGACGACGATATCCCGTTCTGA

Upstream 100 bases:

>100_bases
GATAGTCATGTTGGGCTATCTGTTCGCGCTGGCCTATATCTTCGCGGGAATCACTTACTGGAGCGCGCTGGCGCTCGGAC
TCTAGCGAAGGAATTGTGAA

Downstream 100 bases:

>100_bases
GTCGTCCGCACAGGAACGCCTGCTCTCTAGTTCTTCTTCAACGCGGCCAAGGCCTCGGCCAAGGGTCCGCTGGGCGTGTC
CTCAGTGACAATTCCGGCTC

Product: single-strand binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MAGSLNKVMLIGNLGQDPEVRSFQNGGKVCNLRIATSETWKDRNSGERQERTEWHTVAIFSEGLVNVAERYLKKGSKVYI
EGQLQTRKWQDQSGNDRYSTEVVLRGYNGTLTMLDGAGGGQGGGGGGGYGGGGQRSGGNNGGWDQGGGGQSGGQSGGGSG
GGGGSNYDDLDDDIPF

Sequences:

>Translated_176_residues
MAGSLNKVMLIGNLGQDPEVRSFQNGGKVCNLRIATSETWKDRNSGERQERTEWHTVAIFSEGLVNVAERYLKKGSKVYI
EGQLQTRKWQDQSGNDRYSTEVVLRGYNGTLTMLDGAGGGQGGGGGGGYGGGGQRSGGNNGGWDQGGGGQSGGQSGGGSG
GGGGSNYDDLDDDIPF
>Mature_175_residues
AGSLNKVMLIGNLGQDPEVRSFQNGGKVCNLRIATSETWKDRNSGERQERTEWHTVAIFSEGLVNVAERYLKKGSKVYIE
GQLQTRKWQDQSGNDRYSTEVVLRGYNGTLTMLDGAGGGQGGGGGGGYGGGGQRSGGNNGGWDQGGGGQSGGQSGGGSGG
GGGSNYDDLDDDIPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Homo sapiens, GI4507231, Length=108, Percent_Identity=34.2592592592593, Blast_Score=76, Evalue=2e-14,
Organism=Escherichia coli, GI1790494, Length=179, Percent_Identity=51.3966480446927, Blast_Score=154, Evalue=3e-39,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 18258; Mature: 18127

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGSLNKVMLIGNLGQDPEVRSFQNGGKVCNLRIATSETWKDRNSGERQERTEWHTVAIF
CCCCCCEEEEEECCCCCCCCHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHCCEEEEEEH
SEGLVNVAERYLKKGSKVYIEGQLQTRKWQDQSGNDRYSTEVVLRGYNGTLTMLDGAGGG
HHHHHHHHHHHHHCCCEEEEEECEECCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCC
QGGGGGGGYGGGGQRSGGNNGGWDQGGGGQSGGQSGGGSGGGGGSNYDDLDDDIPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AGSLNKVMLIGNLGQDPEVRSFQNGGKVCNLRIATSETWKDRNSGERQERTEWHTVAIF
CCCCCEEEEEECCCCCCCCHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHCCEEEEEEH
SEGLVNVAERYLKKGSKVYIEGQLQTRKWQDQSGNDRYSTEVVLRGYNGTLTMLDGAGGG
HHHHHHHHHHHHHCCCEEEEEECEECCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCC
QGGGGGGGYGGGGQRSGGNNGGWDQGGGGQSGGQSGGGSGGGGGSNYDDLDDDIPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430; 10503543 [H]