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The map label for this gene is yjfF [H]

Identifier: 85060379

GI number: 85060379

Start: 4110988

End: 4111593

Strand: Reverse

Name: yjfF [H]

Synonym: SG2401

Alternate gene names: 85060379

Gene position: 4111593-4110988 (Counterclockwise)

Preceding gene: 85060380

Following gene: 85060377

Centisome position: 98.57

GC content: 54.29

Gene sequence:

>606_bases
ATGCTGAAACGAAACTTGCCGCTGGCGATGACTATCGTGGTGTTCATTGCCGGTTACTTGTACTGTCTGAGCCAATATCC
CGGCTTTGCCTCTACACGGGTCATTGGTGATTTACTGACGGACAATGCTTTTCTGGGTATCGTGGCGGTGGGAATGACCT
TCGTTATTTTCTCCGGCGGTATTGATTTGTCGGTGGGATCTACAATTGCGTTTACCAGTGTGTTGCTGGCGAAGATGATT
GGGGAATATGACGTTCCGCCCGGACTGGCCTTTGTTATCGTGCTGGCGCTGATCATGTTGTTGGCCGCTGGGGTGCTCTG
GCGCACCGTACACGCTTCGGCCTTACGTTTACGCGATGGGCGGCAACGGTTATTCAGCCGCTCTGATGGGCGTGCCGGTG
AGGAGCACGACGGTGCGGATCTACATGCTATCAAGTTCTCTGGCGGTGTTATCAGGTATCGTGTTTTCTCTTTATACCTC
AGCAGGCTATGCTCTGGCGGCCAGCGGCGTGGAACTGGATACTATCGCGGCGGTGGTCATTGGCGATACGTTATTGACCG
GTGGCGTCGGCACCCTGTTAGGCGCCTTGTTTGGGTCATGATCTAG

Upstream 100 bases:

>100_bases
AGCCCGAATTTAACCTGGTAGTGAAAGCGATTGTGGTGCTGCTGTTTTTGATGGTGCAGTCGCCGCGAATATCGCTGTCG
ATGCTGCGGAGGCGCCGCTG

Downstream 100 bases:

>100_bases
GGGCTGATTCAAAAGTATATCACCTTTGACGGTACGCTCAGCTCCTGGTGGACCAAGATCGTCATCGGGATCCTGCTGTT
CGGTTTTATCGGCTTACAGA

Product: putative sugar ABC transporter permease component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MLKRNLPLAMTIVVFIAGYLYCLSQYPGFASTRVIGDLLTDNAFLGIVAVGMTFVIFSGGIDLSVGSTIAFTSVLLAKMI
GEYDVPPGLAFVIVLALIMLLAAGVLWRTVHASALRLRDGRQRLFSRSDGRAGEEHDGADLHAIKFSGGVIRYRVFSLYL
SRLCSGGQRRGTGYYRGGGHWRYVIDRWRRHPVRRLVWVMI

Sequences:

>Translated_201_residues
MLKRNLPLAMTIVVFIAGYLYCLSQYPGFASTRVIGDLLTDNAFLGIVAVGMTFVIFSGGIDLSVGSTIAFTSVLLAKMI
GEYDVPPGLAFVIVLALIMLLAAGVLWRTVHASALRLRDGRQRLFSRSDGRAGEEHDGADLHAIKFSGGVIRYRVFSLYL
SRLCSGGQRRGTGYYRGGGHWRYVIDRWRRHPVRRLVWVMI
>Mature_201_residues
MLKRNLPLAMTIVVFIAGYLYCLSQYPGFASTRVIGDLLTDNAFLGIVAVGMTFVIFSGGIDLSVGSTIAFTSVLLAKMI
GEYDVPPGLAFVIVLALIMLLAAGVLWRTVHASALRLRDGRQRLFSRSDGRAGEEHDGADLHAIKFSGGVIRYRVFSLYL
SRLCSGGQRRGTGYYRGGGHWRYVIDRWRRHPVRRLVWVMI

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI87082395, Length=97, Percent_Identity=72.1649484536082, Blast_Score=141, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 22313; Mature: 22313

Theoretical pI: Translated: 10.73; Mature: 10.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKRNLPLAMTIVVFIAGYLYCLSQYPGFASTRVIGDLLTDNAFLGIVAVGMTFVIFSGG
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
IDLSVGSTIAFTSVLLAKMIGEYDVPPGLAFVIVLALIMLLAAGVLWRTVHASALRLRDG
CCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQRLFSRSDGRAGEEHDGADLHAIKFSGGVIRYRVFSLYLSRLCSGGQRRGTGYYRGGGH
HHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCEECCCCC
WRYVIDRWRRHPVRRLVWVMI
HHHHHHHHHHCHHHHHHHHCC
>Mature Secondary Structure
MLKRNLPLAMTIVVFIAGYLYCLSQYPGFASTRVIGDLLTDNAFLGIVAVGMTFVIFSGG
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
IDLSVGSTIAFTSVLLAKMIGEYDVPPGLAFVIVLALIMLLAAGVLWRTVHASALRLRDG
CCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQRLFSRSDGRAGEEHDGADLHAIKFSGGVIRYRVFSLYLSRLCSGGQRRGTGYYRGGGH
HHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCEECCCCC
WRYVIDRWRRHPVRRLVWVMI
HHHHHHHHHHCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 2843822; 7984428 [H]