| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is yigL [H]
Identifier: 85060313
GI number: 85060313
Start: 4010747
End: 4011553
Strand: Reverse
Name: yigL [H]
Synonym: SG2335
Alternate gene names: 85060313
Gene position: 4011553-4010747 (Counterclockwise)
Preceding gene: 85060314
Following gene: 85060312
Centisome position: 96.17
GC content: 56.13
Gene sequence:
>807_bases ATGTTCCATATTGTTGCATCCGATCTAGATGGCACACTGCTTTCCCCGGCCCATAGGCTTACCCCCTACACCAAACAAAC CCTGCAACTGCTGACCGCGCGCGGGATCCACTTCGTGTTCGCCACCGGCCGCCACCATGTGGATGTAGCGCAGATGCGCG CCAATCTGGAAATTGACGCCTATATGATCACCTCTAACGGCGCGCGGGTGCACAACACCGCCGGCGAGTTGATCTTCTCC CACAATCTGGACGAGGACATTGCGGCAGAGTTGTGTAGCGTAGTGCATCAGGACCCGAGAATCCTGACCAATATCTTTCG CAATGATGAATGGTTTATGAACCGCAATCGCGCCAATCAGGAAGATTTTTTCCGCGAGTCCACCTTCAAATACCAGGTGT ATCAGCAAGGGGCACTGCCCACGGACGGCATTTGCAAAGTGTATTTCACCTGCGACGATCATCAGCGGCTGCTGGTATTG GAAGAGGCGCTCAACGCCCGCTGGGGCGATCGGGTCAACGTCAGTTTCTCACTGCCGGTTTGCCTGGAGGTCATGGCGGG CGGGGTTTCCAAAGGGCATGCACTGCGGCAGGTGGCCGGTTTGCTGGGCTATCAACTACAGGATTGCATTTCCTTCGGCG ACGGGATGAATGACCAGGAGATGCTGGTGATGGCCGGCAAGGGCTGCATTATGCAAAACGCCCAACAGCGTCTCAAAGAG GCATTGCCGAACCTGGAGGTCATCGGCAGCAACGAAGATGACGCGGTTCCCCGTTATCTGCTGGCAATGTACCTGGGCGA TCGCTAA
Upstream 100 bases:
>100_bases CTGCGCGCGCAGGCGCTCACGCTAATCGCTGATTTCTTTATGCGGCATCATTAATCTGCGGCGCTGGTTTCGCCGCATAC ACCAGAGGTTCTATCGCCCC
Downstream 100 bases:
>100_bases AAAACTTTACAAGTGCGAATGATAATGATTACTATTTTTGTGCTTACCGGCCATTGCGATCCTGGCACGGGAGCACGACA TTGCTCACATTGCTTCCAGT
Product: putative sugar phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MFHIVASDLDGTLLSPAHRLTPYTKQTLQLLTARGIHFVFATGRHHVDVAQMRANLEIDAYMITSNGARVHNTAGELIFS HNLDEDIAAELCSVVHQDPRILTNIFRNDEWFMNRNRANQEDFFRESTFKYQVYQQGALPTDGICKVYFTCDDHQRLLVL EEALNARWGDRVNVSFSLPVCLEVMAGGVSKGHALRQVAGLLGYQLQDCISFGDGMNDQEMLVMAGKGCIMQNAQQRLKE ALPNLEVIGSNEDDAVPRYLLAMYLGDR
Sequences:
>Translated_268_residues MFHIVASDLDGTLLSPAHRLTPYTKQTLQLLTARGIHFVFATGRHHVDVAQMRANLEIDAYMITSNGARVHNTAGELIFS HNLDEDIAAELCSVVHQDPRILTNIFRNDEWFMNRNRANQEDFFRESTFKYQVYQQGALPTDGICKVYFTCDDHQRLLVL EEALNARWGDRVNVSFSLPVCLEVMAGGVSKGHALRQVAGLLGYQLQDCISFGDGMNDQEMLVMAGKGCIMQNAQQRLKE ALPNLEVIGSNEDDAVPRYLLAMYLGDR >Mature_268_residues MFHIVASDLDGTLLSPAHRLTPYTKQTLQLLTARGIHFVFATGRHHVDVAQMRANLEIDAYMITSNGARVHNTAGELIFS HNLDEDIAAELCSVVHQDPRILTNIFRNDEWFMNRNRANQEDFFRESTFKYQVYQQGALPTDGICKVYFTCDDHQRLLVL EEALNARWGDRVNVSFSLPVCLEVMAGGVSKGHALRQVAGLLGYQLQDCISFGDGMNDQEMLVMAGKGCIMQNAQQRLKE ALPNLEVIGSNEDDAVPRYLLAMYLGDR
Specific function: Unknown
COG id: COG0561
COG function: function code R; Predicted hydrolases of the HAD superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]
Homologues:
Organism=Escherichia coli, GI48994981, Length=265, Percent_Identity=67.9245283018868, Blast_Score=389, Evalue=1e-109, Organism=Escherichia coli, GI87081741, Length=260, Percent_Identity=41.5384615384615, Blast_Score=187, Evalue=6e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR013200 - InterPro: IPR006379 - InterPro: IPR000150 [H]
Pfam domain/function: PF08282 Hydrolase_3 [H]
EC number: NA
Molecular weight: Translated: 30151; Mature: 30151
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: PS01228 COF_1 ; PS01229 COF_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFHIVASDLDGTLLSPAHRLTPYTKQTLQLLTARGIHFVFATGRHHVDVAQMRANLEIDA CEEEEECCCCCCCCCCHHHCCCHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHCCCEEEE YMITSNGARVHNTAGELIFSHNLDEDIAAELCSVVHQDPRILTNIFRNDEWFMNRNRANQ EEEECCCCEEECCHHCEEEECCCCHHHHHHHHHHHCCCHHHHHHHHCCCHHEECCCCCCH EDFFRESTFKYQVYQQGALPTDGICKVYFTCDDHQRLLVLEEALNARWGDRVNVSFSLPV HHHHHHCCEEEEEEECCCCCCCCCEEEEEEECCCCEEEHHHHHHCCCCCCEEEEEEECHH CLEVMAGGVSKGHALRQVAGLLGYQLQDCISFGDGMNDQEMLVMAGKGCIMQNAQQRLKE HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHH ALPNLEVIGSNEDDAVPRYLLAMYLGDR HCCCEEEECCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MFHIVASDLDGTLLSPAHRLTPYTKQTLQLLTARGIHFVFATGRHHVDVAQMRANLEIDA CEEEEECCCCCCCCCCHHHCCCHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHCCCEEEE YMITSNGARVHNTAGELIFSHNLDEDIAAELCSVVHQDPRILTNIFRNDEWFMNRNRANQ EEEECCCCEEECCHHCEEEECCCCHHHHHHHHHHHCCCHHHHHHHHCCCHHEECCCCCCH EDFFRESTFKYQVYQQGALPTDGICKVYFTCDDHQRLLVLEEALNARWGDRVNVSFSLPV HHHHHHCCEEEEEEECCCCCCCCCEEEEEEECCCCEEEHHHHHHCCCCCCEEEEEEECHH CLEVMAGGVSKGHALRQVAGLLGYQLQDCISFGDGMNDQEMLVMAGKGCIMQNAQQRLKE HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHH ALPNLEVIGSNEDDAVPRYLLAMYLGDR HCCCEEEECCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]