| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is kefB [H]
Identifier: 85060273
GI number: 85060273
Start: 3943977
End: 3945590
Strand: Reverse
Name: kefB [H]
Synonym: SG2295
Alternate gene names: 85060273
Gene position: 3945590-3943977 (Counterclockwise)
Preceding gene: 85060275
Following gene: 85060272
Centisome position: 94.59
GC content: 58.3
Gene sequence:
>1614_bases GTGCTGGGCTATCTGGCCGCCGGCATCGCCATCGACCCCTGGGGCCTGGGCTTTATTCGCGATGTCGATGAGATACTGCA TTTCTCGGAGCTGGGGGTGGTGTTCTTGATGTTCATCATCGGCCTGGAGCTGAACCCCGCCAAGCTCTGGCACCTGCGGC ACTCGATATTCGGCGTCGGCGCCGCGCAGGTAGCCATCACCGCGGTGCTGCTGGGTGCCGCGCTTACCTTTACCGGTATG CGCTGGCAGGCGGCGCTTATCGGCGGCATTGGCATCGCCATGTCCTCTACCGCCATTGCGCTGCAGTTGATGCGCGACAA AGGCATGAACCGCAATGAGGGCGGCCAATTGGGGTTTTCGGTGTTACTGTTTCAGGATATGGCGGTGATCCCGGCACTGT CTCTGATTCCCTTTCTCGCAGGCTGCGCCGGCGGGCACGGCGATTGGATGAAGATCAGCATTAAACTGGCGGCATTCTTT GGAATGCTGGTCGGCGGGCGCTTCCTACTGCGGTCGCTGTTTCGCTATATCGCCTCGGTGAACGTGCACGAGGTGCTTAC CGCCGCCAGCCTGCTGTTGGTGCTGGGTGCCGCGTTATTCATGGATTTGCGTGGCCTGTCGATGGCCCTTGGCACCTTTA TCGCCGGCGTGCTGCTGGCTGAAAGCGAGTACCGCCATGAATTCGAGATCGCTATTGAGCCGTTCAAGGGGCTGCTGCTG GGATTGTTTTTTATCTCGGTCGGCATGGCGCTGAACCTGGGGATCCTGTATGTGCACGTCCTGACAGTGCTGGCCGGCGT CGCCATCCTGGTGGCCATCAAGGGAACGGTGTTGTATATCCTGGCGCGCCTGTCGGGGCTGAAACGTTCGGTCCGGCTGC AATTCGCCGGCGTACTGAGCCAGGGCGGGGAATTTGCCTTCGTTTTGTTCTCGGCGGCCTCGGTGCAGAAAATCCTCACC GGCGATCAATTATCGTTATTGCTGGTGATCGTCACCTTGTCGATGATCACCACCCCGATATTGATGCAATTGATCGATCG TATCCTGGTCCGGCGTTATAATGCAGTAGAAGAAAACGATGAAAAACCCTTCGTCAACGACGATGACCCGCAGGTTATCA TTGTCGGCTTCGGCCGTTTCGGTCAGGTGATAGGTCGCCTGCTGATGGCAAATAAAACCCGTATTACGGTGCTTGAGCGT GATATCAGCGTGGTCAGCTTGATGCGCGGCTATGGTTATAAAGTGTATTACGGCGATGCCACCGAACTGGAGCTGTTGCG GGCGGCGGGAGCGGAGAAGGCCAGAACGATCGTCGTTGCGGCCAATACGCCTGAAGATAATATGGCCATCATCCGCCTGT GCCAGCAGCATTTTCCCCAGTTGCAGATTTTGGCGCGCGGGCGTGTCGAAGCGCATGAGCTACTGCAGGTCGGCGTGTCG CGATTTTCAAGGGAAACGTTCTCCAGCGCTTTGGAGCTGGGGCGCAAGGTGCTGCAATCGTTAGGTATGCATCCACATCA GGCCTACCGGGCGCAGCAGCATTTCCGCCGGCTGGATATGCGCATGCTGCGTGAGTTGATGCCCCAGGAGGAGGGGGGCA CAGTTCGCGTGTAA
Upstream 100 bases:
>100_bases CGAGAGCGCCTATCAGACCCGCGGCGCGTTAGGGGTGGAGAGACAGATATCCTGCGTCTTTTCGCTCTGACCGCAGCACT GTGCCGCATGCATCGGCGCA
Downstream 100 bases:
>100_bases AGGAAGCGCGGCGCGAACTGGAAGACATTTTCCAGCGCGAGATGCAACAGGAGCAGCGGCTGCTCGACGGCTGGGGCGAG GATGATCAACAGGGAGAACG
Product: glutathione-regulated potassium-efflux system protein KefB
Products: Proton [Cytoplasm]; K (I) [Periplasm] [C]
Alternate protein names: K(+)/H(+) antiporter; NEM-activatable K(+)/H(+) antiporter [H]
Number of amino acids: Translated: 537; Mature: 537
Protein sequence:
>537_residues MLGYLAAGIAIDPWGLGFIRDVDEILHFSELGVVFLMFIIGLELNPAKLWHLRHSIFGVGAAQVAITAVLLGAALTFTGM RWQAALIGGIGIAMSSTAIALQLMRDKGMNRNEGGQLGFSVLLFQDMAVIPALSLIPFLAGCAGGHGDWMKISIKLAAFF GMLVGGRFLLRSLFRYIASVNVHEVLTAASLLLVLGAALFMDLRGLSMALGTFIAGVLLAESEYRHEFEIAIEPFKGLLL GLFFISVGMALNLGILYVHVLTVLAGVAILVAIKGTVLYILARLSGLKRSVRLQFAGVLSQGGEFAFVLFSAASVQKILT GDQLSLLLVIVTLSMITTPILMQLIDRILVRRYNAVEENDEKPFVNDDDPQVIIVGFGRFGQVIGRLLMANKTRITVLER DISVVSLMRGYGYKVYYGDATELELLRAAGAEKARTIVVAANTPEDNMAIIRLCQQHFPQLQILARGRVEAHELLQVGVS RFSRETFSSALELGRKVLQSLGMHPHQAYRAQQHFRRLDMRMLRELMPQEEGGTVRV
Sequences:
>Translated_537_residues MLGYLAAGIAIDPWGLGFIRDVDEILHFSELGVVFLMFIIGLELNPAKLWHLRHSIFGVGAAQVAITAVLLGAALTFTGM RWQAALIGGIGIAMSSTAIALQLMRDKGMNRNEGGQLGFSVLLFQDMAVIPALSLIPFLAGCAGGHGDWMKISIKLAAFF GMLVGGRFLLRSLFRYIASVNVHEVLTAASLLLVLGAALFMDLRGLSMALGTFIAGVLLAESEYRHEFEIAIEPFKGLLL GLFFISVGMALNLGILYVHVLTVLAGVAILVAIKGTVLYILARLSGLKRSVRLQFAGVLSQGGEFAFVLFSAASVQKILT GDQLSLLLVIVTLSMITTPILMQLIDRILVRRYNAVEENDEKPFVNDDDPQVIIVGFGRFGQVIGRLLMANKTRITVLER DISVVSLMRGYGYKVYYGDATELELLRAAGAEKARTIVVAANTPEDNMAIIRLCQQHFPQLQILARGRVEAHELLQVGVS RFSRETFSSALELGRKVLQSLGMHPHQAYRAQQHFRRLDMRMLRELMPQEEGGTVRV >Mature_537_residues MLGYLAAGIAIDPWGLGFIRDVDEILHFSELGVVFLMFIIGLELNPAKLWHLRHSIFGVGAAQVAITAVLLGAALTFTGM RWQAALIGGIGIAMSSTAIALQLMRDKGMNRNEGGQLGFSVLLFQDMAVIPALSLIPFLAGCAGGHGDWMKISIKLAAFF GMLVGGRFLLRSLFRYIASVNVHEVLTAASLLLVLGAALFMDLRGLSMALGTFIAGVLLAESEYRHEFEIAIEPFKGLLL GLFFISVGMALNLGILYVHVLTVLAGVAILVAIKGTVLYILARLSGLKRSVRLQFAGVLSQGGEFAFVLFSAASVQKILT GDQLSLLLVIVTLSMITTPILMQLIDRILVRRYNAVEENDEKPFVNDDDPQVIIVGFGRFGQVIGRLLMANKTRITVLER DISVVSLMRGYGYKVYYGDATELELLRAAGAEKARTIVVAANTPEDNMAIIRLCQQHFPQLQILARGRVEAHELLQVGVS RFSRETFSSALELGRKVLQSLGMHPHQAYRAQQHFRRLDMRMLRELMPQEEGGTVRV
Specific function: Transport system that facilitates potassium-efflux, possibly by potassium-proton antiport [H]
COG id: COG0475
COG function: function code P; Kef-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI157388921, Length=380, Percent_Identity=26.3157894736842, Blast_Score=68, Evalue=2e-11, Organism=Escherichia coli, GI1789749, Length=530, Percent_Identity=74.5283018867924, Blast_Score=772, Evalue=0.0, Organism=Escherichia coli, GI1786232, Length=541, Percent_Identity=42.8835489833641, Blast_Score=429, Evalue=1e-121, Organism=Escherichia coli, GI1786685, Length=525, Percent_Identity=28.7619047619048, Blast_Score=162, Evalue=4e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR020884 - InterPro: IPR004771 - InterPro: IPR016040 - InterPro: IPR003148 [H]
Pfam domain/function: PF00999 Na_H_Exchanger; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 58781; Mature: 58781
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGYLAAGIAIDPWGLGFIRDVDEILHFSELGVVFLMFIIGLELNPAKLWHLRHSIFGVG CCCCEECCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC AAQVAITAVLLGAALTFTGMRWQAALIGGIGIAMSSTAIALQLMRDKGMNRNEGGQLGFS HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH VLLFQDMAVIPALSLIPFLAGCAGGHGDWMKISIKLAAFFGMLVGGRFLLRSLFRYIASV HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCC NVHEVLTAASLLLVLGAALFMDLRGLSMALGTFIAGVLLAESEYRHEFEIAIEPFKGLLL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHH GLFFISVGMALNLGILYVHVLTVLAGVAILVAIKGTVLYILARLSGLKRSVRLQFAGVLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC QGGEFAFVLFSAASVQKILTGDQLSLLLVIVTLSMITTPILMQLIDRILVRRYNAVEEND CCCCEEEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC EKPFVNDDDPQVIIVGFGRFGQVIGRLLMANKTRITVLERDISVVSLMRGYGYKVYYGDA CCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCEEEEECCC TELELLRAAGAEKARTIVVAANTPEDNMAIIRLCQQHFPQLQILARGRVEAHELLQVGVS HHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCEEEHHCCCCHHHHHHHHHHH RFSRETFSSALELGRKVLQSLGMHPHQAYRAQQHFRRLDMRMLRELMPQEEGGTVRV HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MLGYLAAGIAIDPWGLGFIRDVDEILHFSELGVVFLMFIIGLELNPAKLWHLRHSIFGVG CCCCEECCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC AAQVAITAVLLGAALTFTGMRWQAALIGGIGIAMSSTAIALQLMRDKGMNRNEGGQLGFS HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH VLLFQDMAVIPALSLIPFLAGCAGGHGDWMKISIKLAAFFGMLVGGRFLLRSLFRYIASV HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCC NVHEVLTAASLLLVLGAALFMDLRGLSMALGTFIAGVLLAESEYRHEFEIAIEPFKGLLL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHH GLFFISVGMALNLGILYVHVLTVLAGVAILVAIKGTVLYILARLSGLKRSVRLQFAGVLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC QGGEFAFVLFSAASVQKILTGDQLSLLLVIVTLSMITTPILMQLIDRILVRRYNAVEEND CCCCEEEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC EKPFVNDDDPQVIIVGFGRFGQVIGRLLMANKTRITVLERDISVVSLMRGYGYKVYYGDA CCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCEEEEECCC TELELLRAAGAEKARTIVVAANTPEDNMAIIRLCQQHFPQLQILARGRVEAHELLQVGVS HHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCEEEHHCCCCHHHHHHHHHHH RFSRETFSSALELGRKVLQSLGMHPHQAYRAQQHFRRLDMRMLRELMPQEEGGTVRV HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; K (I) [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + K (I) [Cytoplasm] = Proton [Cytoplasm] + K (I) [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA