| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
Click here to switch to the map view.
The map label for this gene is fusA [H]
Identifier: 85060262
GI number: 85060262
Start: 3936295
End: 3938400
Strand: Reverse
Name: fusA [H]
Synonym: SG2284
Alternate gene names: 85060262
Gene position: 3938400-3936295 (Counterclockwise)
Preceding gene: 85060263
Following gene: 85060261
Centisome position: 94.42
GC content: 55.56
Gene sequence:
>2106_bases ATGGCTCGTATAACCCCCATCGCACGCTATCGTAACATCGGTATCAGTGCACACATCGACGCGGGTAAAACCACCACGAC TGAACGTATCCTGTTCTATACGGGTGTGAACCACAAGATCGGTGAGGTTCATAATGGCGCTGCCACCATGGACTGGATGG CGCAGGAGCAGGAACGTGGTATCACCATCACGTCCGCCGCAACCACCTGTTTCTGGGCCGGCATGGCCAAACAGTTTGAT TCGCACCGCATTAACATCATCGACACCCCGGGACATGTTGACTTCACCATCGAAGTAGAACGTTCCATGCGCGTGCTCGA TGGCGCCGTGATGGTTTACTGTGCGGTTGGCGGCGTGCAGCCGCAGTCTGAAACCGTGTGGCGTCAGGCAAACAAATACA AAGTGCCGCGTATCGCGTTCGTCAATAAAATGGACCGTATGGGCGCCAACTACCTGCGCGTCGTTGAACAGCTGAAAACC CGTCTGGCCGCTAACCCGGTTCCGATCCAGCTGGCTATCGGCGCGGAAGAAAAATTCACCGGCGTCGTCGACCTGGTGAA GATGAAAGCGATCAACTGGAGCGAAGCGGACCAGGGCGTGACCTTCACTTATGAAGACATCCCTGCCGATTTGACCGAGC TGGCCGACAAATGGCACCAGCATCTGGTGGAATCCGCAGCTGAAGCGTCTGAAGAGCTGATGGACAAGTACCTGGGCGGC GAAGAGCTGACCGAAGAAGAGATCAAACACGGTCTGCGTCAGCGCGTTCTGAACAACGAAATCATTCTGGTTACCTGTGG TTCCGCGTTTAAGAACAAGGGCGTGCAGGCTATGCTGGATGCGGTCATTGAGTATCTGCCGGCACCGACTGACGTTGCTG CCATTAACGGCGTACTGGAAGACGGCGAAACCCACGCTGAACGTCATTCCAGCGATGAAGAGCCGTTCTCGGCGCTGGCG TTTAAAATCGCCACCGACCCGTTCGTCGGCAACCTGACCTTCTTCCGCGTCTACTCCGGCGTCGTCAATTCCGGCGACAC CGTGCTGAACTCGGTGAAGGACAAGCGCGAGCGTTTCGGTCGTATCGTACAGATGCACGCCAACAAGCGTGAAGAAATCA AGGAAGTGCGTGCCGGCGATATCGCCGCGGCCATCGGCCTGAAGGACGTCACCACCGGGGATACCCTGTGCGATACCTCC GCGCCGATCATCCTTGAGCGTATGGAATTCCCGGAGCCGGTTATCTCCGTTGCCGTGGAACCGAAAACCAAGGCCGACCA GGAAAAAATGGGTCTGGCACTGGGCCGTCTGGCGCAGGAAGACCCGTCTTTCCGCGTGTGGACCGATGAAGAATCCGGTC AGACTATCATCGCCGGTATGGGTGAACTGCACCTTGAAATCCTCGTCGACCGTATGCGTCGCGAATTCAACGTGGAAGCC AACGTCGGTAAGCCGCAGGTGGCCTACCGCGAAACGATCCGCTCCATTGTCGAGCAAGAAGGTAAATTTGTTCGTCAGTC CGGTGGTCGCGGTCAGTTCGGTCACGTTTGGCTGCGTATCGAACCGATGGAACCGGGTGGTAAAGGCTACGAGTTCCTGA ACGAAATCGTCGGTGGTGTGGTACCGAAAGAATACGTTCCGGCGGTAGATAAAGGCGTTCAGGAACAGCTGAAAAGCGGT GTTCTGGCCGGTTACCCGATCGTAGACGTCCGTGTTGCCGCCTTCGATGGTTCTTACCACGAAGTCGACTCCTCGGAAAT GGCGTTCAAGATTGCCGGTTCCATGGCGTTCAAAGAAGGCTTCATGAAGGCAAAACCGGTTCTGCTGGAACCCATCATGA AGGTCGAAGTTGAAACGCCTGAAGACTACATGGGTGATGTGATTGGTGACTTGAACCGTCGTCGCGGTATGATTGACGGT ATGGAAGACACCACGACCGGTAAAACCGTTCGTGCGCAGGTCCCCTTGTCTGAAATGTTCGGTTATGCTACTGATCTGCG TTCACAGACTCAGGGCCGTGCTTCTTACTCCATGGAGTTCCTGAAGTACAATGAAGCACCGAACAACGTTGCTCAGGCCA TTATCGAAACCCGCAGAGCCAAGTAA
Upstream 100 bases:
>100_bases TGGTAATCGCACCGCAGTAGTCACGCTAACCCGGCGGACGCTCATGAGCTGTCCCAGCCGGGTTAGCTCGAAATGAACGC CCTAGTAATCGAGGATTCAA
Downstream 100 bases:
>100_bases GCTTCAAGGGTTACAATTAATATCCCGTGCTCTCACCCCGTTGGTGAGAGCATAAGAGTAAGGAATATAGCCGTGTCTAA AGAAAAGTTTCAACGCACCA
Product: elongation factor G
Products: GDP; phosphate
Alternate protein names: EF-G [H]
Number of amino acids: Translated: 701; Mature: 700
Protein sequence:
>701_residues MARITPIARYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHNGAATMDWMAQEQERGITITSAATTCFWAGMAKQFD SHRINIIDTPGHVDFTIEVERSMRVLDGAVMVYCAVGGVQPQSETVWRQANKYKVPRIAFVNKMDRMGANYLRVVEQLKT RLAANPVPIQLAIGAEEKFTGVVDLVKMKAINWSEADQGVTFTYEDIPADLTELADKWHQHLVESAAEASEELMDKYLGG EELTEEEIKHGLRQRVLNNEIILVTCGSAFKNKGVQAMLDAVIEYLPAPTDVAAINGVLEDGETHAERHSSDEEPFSALA FKIATDPFVGNLTFFRVYSGVVNSGDTVLNSVKDKRERFGRIVQMHANKREEIKEVRAGDIAAAIGLKDVTTGDTLCDTS APIILERMEFPEPVISVAVEPKTKADQEKMGLALGRLAQEDPSFRVWTDEESGQTIIAGMGELHLEILVDRMRREFNVEA NVGKPQVAYRETIRSIVEQEGKFVRQSGGRGQFGHVWLRIEPMEPGGKGYEFLNEIVGGVVPKEYVPAVDKGVQEQLKSG VLAGYPIVDVRVAAFDGSYHEVDSSEMAFKIAGSMAFKEGFMKAKPVLLEPIMKVEVETPEDYMGDVIGDLNRRRGMIDG MEDTTTGKTVRAQVPLSEMFGYATDLRSQTQGRASYSMEFLKYNEAPNNVAQAIIETRRAK
Sequences:
>Translated_701_residues MARITPIARYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHNGAATMDWMAQEQERGITITSAATTCFWAGMAKQFD SHRINIIDTPGHVDFTIEVERSMRVLDGAVMVYCAVGGVQPQSETVWRQANKYKVPRIAFVNKMDRMGANYLRVVEQLKT RLAANPVPIQLAIGAEEKFTGVVDLVKMKAINWSEADQGVTFTYEDIPADLTELADKWHQHLVESAAEASEELMDKYLGG EELTEEEIKHGLRQRVLNNEIILVTCGSAFKNKGVQAMLDAVIEYLPAPTDVAAINGVLEDGETHAERHSSDEEPFSALA FKIATDPFVGNLTFFRVYSGVVNSGDTVLNSVKDKRERFGRIVQMHANKREEIKEVRAGDIAAAIGLKDVTTGDTLCDTS APIILERMEFPEPVISVAVEPKTKADQEKMGLALGRLAQEDPSFRVWTDEESGQTIIAGMGELHLEILVDRMRREFNVEA NVGKPQVAYRETIRSIVEQEGKFVRQSGGRGQFGHVWLRIEPMEPGGKGYEFLNEIVGGVVPKEYVPAVDKGVQEQLKSG VLAGYPIVDVRVAAFDGSYHEVDSSEMAFKIAGSMAFKEGFMKAKPVLLEPIMKVEVETPEDYMGDVIGDLNRRRGMIDG MEDTTTGKTVRAQVPLSEMFGYATDLRSQTQGRASYSMEFLKYNEAPNNVAQAIIETRRAK >Mature_700_residues ARITPIARYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHNGAATMDWMAQEQERGITITSAATTCFWAGMAKQFDS HRINIIDTPGHVDFTIEVERSMRVLDGAVMVYCAVGGVQPQSETVWRQANKYKVPRIAFVNKMDRMGANYLRVVEQLKTR LAANPVPIQLAIGAEEKFTGVVDLVKMKAINWSEADQGVTFTYEDIPADLTELADKWHQHLVESAAEASEELMDKYLGGE ELTEEEIKHGLRQRVLNNEIILVTCGSAFKNKGVQAMLDAVIEYLPAPTDVAAINGVLEDGETHAERHSSDEEPFSALAF KIATDPFVGNLTFFRVYSGVVNSGDTVLNSVKDKRERFGRIVQMHANKREEIKEVRAGDIAAAIGLKDVTTGDTLCDTSA PIILERMEFPEPVISVAVEPKTKADQEKMGLALGRLAQEDPSFRVWTDEESGQTIIAGMGELHLEILVDRMRREFNVEAN VGKPQVAYRETIRSIVEQEGKFVRQSGGRGQFGHVWLRIEPMEPGGKGYEFLNEIVGGVVPKEYVPAVDKGVQEQLKSGV LAGYPIVDVRVAAFDGSYHEVDSSEMAFKIAGSMAFKEGFMKAKPVLLEPIMKVEVETPEDYMGDVIGDLNRRRGMIDGM EDTTTGKTVRAQVPLSEMFGYATDLRSQTQGRASYSMEFLKYNEAPNNVAQAIIETRRAK
Specific function: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=703, Percent_Identity=43.6699857752489, Blast_Score=564, Evalue=1e-161, Organism=Homo sapiens, GI19923640, Length=736, Percent_Identity=37.7717391304348, Blast_Score=448, Evalue=1e-125, Organism=Homo sapiens, GI25306287, Length=712, Percent_Identity=36.7977528089888, Blast_Score=396, Evalue=1e-110, Organism=Homo sapiens, GI25306283, Length=459, Percent_Identity=39.6514161220044, Blast_Score=297, Evalue=2e-80, Organism=Homo sapiens, GI4503483, Length=438, Percent_Identity=28.310502283105, Blast_Score=120, Evalue=5e-27, Organism=Homo sapiens, GI157426893, Length=159, Percent_Identity=35.8490566037736, Blast_Score=100, Evalue=7e-21, Organism=Homo sapiens, GI94966754, Length=140, Percent_Identity=37.8571428571429, Blast_Score=96, Evalue=1e-19, Organism=Homo sapiens, GI310132016, Length=123, Percent_Identity=38.2113821138211, Blast_Score=80, Evalue=8e-15, Organism=Homo sapiens, GI310110807, Length=123, Percent_Identity=38.2113821138211, Blast_Score=80, Evalue=8e-15, Organism=Homo sapiens, GI310123363, Length=123, Percent_Identity=38.2113821138211, Blast_Score=80, Evalue=8e-15, Organism=Homo sapiens, GI94966752, Length=99, Percent_Identity=37.3737373737374, Blast_Score=71, Evalue=3e-12, Organism=Escherichia coli, GI1789738, Length=702, Percent_Identity=83.7606837606838, Blast_Score=1222, Evalue=0.0, Organism=Escherichia coli, GI1790835, Length=493, Percent_Identity=25.9634888438134, Blast_Score=144, Evalue=2e-35, Organism=Escherichia coli, GI48994988, Length=152, Percent_Identity=40.1315789473684, Blast_Score=103, Evalue=4e-23, Organism=Escherichia coli, GI1788922, Length=149, Percent_Identity=36.241610738255, Blast_Score=90, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17533571, Length=693, Percent_Identity=43.001443001443, Blast_Score=530, Evalue=1e-151, Organism=Caenorhabditis elegans, GI17556745, Length=730, Percent_Identity=28.9041095890411, Blast_Score=306, Evalue=2e-83, Organism=Caenorhabditis elegans, GI17506493, Length=436, Percent_Identity=28.4403669724771, Blast_Score=120, Evalue=2e-27, Organism=Caenorhabditis elegans, GI17557151, Length=167, Percent_Identity=36.5269461077844, Blast_Score=94, Evalue=3e-19, Organism=Caenorhabditis elegans, GI71988819, Length=147, Percent_Identity=31.9727891156463, Blast_Score=74, Evalue=3e-13, Organism=Caenorhabditis elegans, GI71988811, Length=147, Percent_Identity=31.9727891156463, Blast_Score=73, Evalue=6e-13, Organism=Saccharomyces cerevisiae, GI6323098, Length=696, Percent_Identity=42.3850574712644, Blast_Score=566, Evalue=1e-162, Organism=Saccharomyces cerevisiae, GI6322359, Length=798, Percent_Identity=30.2005012531328, Blast_Score=358, Evalue=2e-99, Organism=Saccharomyces cerevisiae, GI6324707, Length=481, Percent_Identity=27.027027027027, Blast_Score=121, Evalue=3e-28, Organism=Saccharomyces cerevisiae, GI6320593, Length=481, Percent_Identity=27.027027027027, Blast_Score=121, Evalue=3e-28, Organism=Saccharomyces cerevisiae, GI6323320, Length=178, Percent_Identity=32.5842696629214, Blast_Score=87, Evalue=6e-18, Organism=Saccharomyces cerevisiae, GI6324166, Length=145, Percent_Identity=38.6206896551724, Blast_Score=85, Evalue=4e-17, Organism=Drosophila melanogaster, GI24582462, Length=706, Percent_Identity=44.4759206798867, Blast_Score=584, Evalue=1e-167, Organism=Drosophila melanogaster, GI221458488, Length=738, Percent_Identity=30.8943089430894, Blast_Score=348, Evalue=7e-96, Organism=Drosophila melanogaster, GI24585711, Length=839, Percent_Identity=26.8176400476758, Blast_Score=180, Evalue=3e-45, Organism=Drosophila melanogaster, GI24585713, Length=839, Percent_Identity=26.8176400476758, Blast_Score=180, Evalue=3e-45, Organism=Drosophila melanogaster, GI24585709, Length=839, Percent_Identity=27.0560190703218, Blast_Score=180, Evalue=3e-45, Organism=Drosophila melanogaster, GI21357743, Length=802, Percent_Identity=23.4413965087282, Blast_Score=133, Evalue=5e-31, Organism=Drosophila melanogaster, GI78706572, Length=186, Percent_Identity=33.8709677419355, Blast_Score=102, Evalue=1e-21, Organism=Drosophila melanogaster, GI28574573, Length=141, Percent_Identity=38.2978723404255, Blast_Score=87, Evalue=6e-17,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR004540 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: 3.6.5.3
Molecular weight: Translated: 77711; Mature: 77580
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: PS00301 EFACTOR_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARITPIARYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHNGAATMDWMAQEQERG CCCCCCHHHHHCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCC ITITSAATTCFWAGMAKQFDSHRINIIDTPGHVDFTIEVERSMRVLDGAVMVYCAVGGVQ EEEEEHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEECHHHHHHHHHHEEEEECCCCC PQSETVWRQANKYKVPRIAFVNKMDRMGANYLRVVEQLKTRLAANPVPIQLAIGAEEKFT CCHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHH GVVDLVKMKAINWSEADQGVTFTYEDIPADLTELADKWHQHLVESAAEASEELMDKYLGG HHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EELTEEEIKHGLRQRVLNNEIILVTCGSAFKNKGVQAMLDAVIEYLPAPTDVAAINGVLE CCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHC DGETHAERHSSDEEPFSALAFKIATDPFVGNLTFFRVYSGVVNSGDTVLNSVKDKRERFG CCHHHHHHCCCCCCCHHHHEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH RIVQMHANKREEIKEVRAGDIAAAIGLKDVTTGDTLCDTSAPIILERMEFPEPVISVAVE HHHHHHCCCHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCEEHHHCCCCCHHEEEEC PKTKADQEKMGLALGRLAQEDPSFRVWTDEESGQTIIAGMGELHLEILVDRMRREFNVEA CCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEECCHHHHHHHHHHHHHHHCCCCC NVGKPQVAYRETIRSIVEQEGKFVRQSGGRGQFGHVWLRIEPMEPGGKGYEFLNEIVGGV CCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHCCC VPKEYVPAVDKGVQEQLKSGVLAGYPIVDVRVAAFDGSYHEVDSSEMAFKIAGSMAFKEG CCHHHCCHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCHHEEHHHHHHHHHHH FMKAKPVLLEPIMKVEVETPEDYMGDVIGDLNRRRGMIDGMEDTTTGKTVRAQVPLSEMF HHHCCCHHHCCHHEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHHHH GYATDLRSQTQGRASYSMEFLKYNEAPNNVAQAIIETRRAK HHHHHHHHHHCCCHHHEEHEEEECCCCHHHHHHHHHHHCCC >Mature Secondary Structure ARITPIARYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHNGAATMDWMAQEQERG CCCCCHHHHHCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCC ITITSAATTCFWAGMAKQFDSHRINIIDTPGHVDFTIEVERSMRVLDGAVMVYCAVGGVQ EEEEEHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEECHHHHHHHHHHEEEEECCCCC PQSETVWRQANKYKVPRIAFVNKMDRMGANYLRVVEQLKTRLAANPVPIQLAIGAEEKFT CCHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHH GVVDLVKMKAINWSEADQGVTFTYEDIPADLTELADKWHQHLVESAAEASEELMDKYLGG HHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EELTEEEIKHGLRQRVLNNEIILVTCGSAFKNKGVQAMLDAVIEYLPAPTDVAAINGVLE CCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHC DGETHAERHSSDEEPFSALAFKIATDPFVGNLTFFRVYSGVVNSGDTVLNSVKDKRERFG CCHHHHHHCCCCCCCHHHHEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH RIVQMHANKREEIKEVRAGDIAAAIGLKDVTTGDTLCDTSAPIILERMEFPEPVISVAVE HHHHHHCCCHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCEEHHHCCCCCHHEEEEC PKTKADQEKMGLALGRLAQEDPSFRVWTDEESGQTIIAGMGELHLEILVDRMRREFNVEA CCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEECCHHHHHHHHHHHHHHHCCCCC NVGKPQVAYRETIRSIVEQEGKFVRQSGGRGQFGHVWLRIEPMEPGGKGYEFLNEIVGGV CCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHCCC VPKEYVPAVDKGVQEQLKSGVLAGYPIVDVRVAAFDGSYHEVDSSEMAFKIAGSMAFKEG CCHHHCCHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCHHEEHHHHHHHHHHH FMKAKPVLLEPIMKVEVETPEDYMGDVIGDLNRRRGMIDGMEDTTTGKTVRAQVPLSEMF HHHCCCHHHCCHHEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHHHH GYATDLRSQTQGRASYSMEFLKYNEAPNNVAQAIIETRRAK HHHHHHHHHHCCCHHHEEHEEEECCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP; H2O
Specific reaction: GTP + H2O = GDP + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 14528314 [H]