| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85060050
Identifier: 85060050
GI number: 85060050
Start: 3580045
End: 3581493
Strand: Reverse
Name: 85060050
Synonym: SG2072
Alternate gene names: NA
Gene position: 3581493-3580045 (Counterclockwise)
Preceding gene: 85060052
Following gene: 85060048
Centisome position: 85.86
GC content: 57.83
Gene sequence:
>1449_bases ATGAAAACAGATCGAATTATTCTGCTTGGCTGGTGTGCGAGCTATGCCATGTTATGGGCGGGGGTGACTTTCCTGTTGGA TCCCACCGTGCCTTATGATGCCATTGAGGCGGTAAACTGGGCAATGAACGCGGAGTGGGGTTCCCCTAAAAATCCGTGGC TGGTTGGCATGGTTATGCGCCCGGCGCTGGGGCTGTCGGCGCCCTGGTTAAGCTTTTATTGGTATGCGACACATTTTTTG GCGGTGGCGGTGGGCATGTATGGCGTCTGGCAACTTGCCTGGCGCTTGAGCGGCGACCGGCGCCTGGCCTGGCTGGCGTT GCTGGCGCTTAACCTCAGCGGCGTTATCAATTTTGATATTATTTCATTTAACGATAACTACCTGCTGGTGATGTTATGGC CCTGGCTGTGGGTGTTTTTCCTACGGGCAGCCTTCGATCGCCCCGGTTGGTGGCTGGCGTTCGCCTTTACCGGGGGGCTG GCCTGTATGGCGAAATATTCCAGCCTCTCTTTTATTTTCTCGGCCTGGATGTTGACGCTATGGGTGCCGAGCATTCGCCG CTGTTATCGCCAGCCGGTGTTCTATCTGGCTATTCTGCTATGGTTGATTATCGTGGCACCAAACGGTTGGTGGCTTTGGC AAAATGACTTTGCCGCTTTCAAGTGGGTGGATTCGCAGGTATCGCCCGGATTGACGCTGCACGGGTTGGTGTCGGCATTG ACGGTCTTTTATCCACTGGCGTTGCTCGCCGCCGTGCTCATCGGGCTGCGGGCCCGGCTGGGTTGGCCTGGCGCCCCGCA GGCTCGGGCGGCGTTAATGATGCTGCTGATTCCGCTGGCGCCTATCCTTATATGGTTCAGTTTTCATGACGGTGGTCGCA TTACCGAATGGCTCCAGCCTTATATGATGCCCGCCACGGCGCTGATGATGGCCTGCGTCACGCAACCATCCTCCCGTCCG TTGGCGGGCGTGCTTAAGAAACTGTCTCTGTGTGCGCCGCTGGTGCTGGCGGGTTACAGCGCTGTGATGCTGCTAAACGT GCGCGGCGCCGGCGAAAAATTGGCCGGCATCAAACCCTTCAGCCAGCAGGTGAGTGCGCGTTGGCAACAGCATTATCATC AACCGGTGCGCTTTGTCGGCGGCGATTATCTGTCCCAGTGGCTAACGTTCTACATTGACGACCGTCCGGCGGTAATTACG CCCTGGTCAGTAAGTCAGCGGCCGAATATTTACAACCGCACGGTGCGAGAGGACAGATTGTTGCGCGATGGCGTGGCGCT GGTAGGGCCACGCGGGCAGAACTGCGGCGAAGCAGATTTCAGCGAACTGCTGGCGTCCTGGCCGGCATTGTCCGTAGGTT ATCGCGAGGAGATCGCCTTCGTACCCCATCCCGGCTCCTCCCCAATACCGATTTGTCTTGCTTTTGTGCCGCCCGCAACG TCGAAGTGA
Upstream 100 bases:
>100_bases ATGGGTCGCTACTTATATTTCCGCCACAGGAAACGTTGATGTTTAGGCAATGTTTAGCGCCGCGGCACTATGGTAGGAAA AAATTTATTAACCGGGTCGC
Downstream 100 bases:
>100_bases TTTCGGCAGACGGCAGACACAAACGTCAGACGGCGGACGCCGGAAGCCAGACTAAGGGATCAGCGCCGCAGCGGTGAGCG GTGCAGGAACCGGCTAAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 482; Mature: 482
Protein sequence:
>482_residues MKTDRIILLGWCASYAMLWAGVTFLLDPTVPYDAIEAVNWAMNAEWGSPKNPWLVGMVMRPALGLSAPWLSFYWYATHFL AVAVGMYGVWQLAWRLSGDRRLAWLALLALNLSGVINFDIISFNDNYLLVMLWPWLWVFFLRAAFDRPGWWLAFAFTGGL ACMAKYSSLSFIFSAWMLTLWVPSIRRCYRQPVFYLAILLWLIIVAPNGWWLWQNDFAAFKWVDSQVSPGLTLHGLVSAL TVFYPLALLAAVLIGLRARLGWPGAPQARAALMMLLIPLAPILIWFSFHDGGRITEWLQPYMMPATALMMACVTQPSSRP LAGVLKKLSLCAPLVLAGYSAVMLLNVRGAGEKLAGIKPFSQQVSARWQQHYHQPVRFVGGDYLSQWLTFYIDDRPAVIT PWSVSQRPNIYNRTVREDRLLRDGVALVGPRGQNCGEADFSELLASWPALSVGYREEIAFVPHPGSSPIPICLAFVPPAT SK
Sequences:
>Translated_482_residues MKTDRIILLGWCASYAMLWAGVTFLLDPTVPYDAIEAVNWAMNAEWGSPKNPWLVGMVMRPALGLSAPWLSFYWYATHFL AVAVGMYGVWQLAWRLSGDRRLAWLALLALNLSGVINFDIISFNDNYLLVMLWPWLWVFFLRAAFDRPGWWLAFAFTGGL ACMAKYSSLSFIFSAWMLTLWVPSIRRCYRQPVFYLAILLWLIIVAPNGWWLWQNDFAAFKWVDSQVSPGLTLHGLVSAL TVFYPLALLAAVLIGLRARLGWPGAPQARAALMMLLIPLAPILIWFSFHDGGRITEWLQPYMMPATALMMACVTQPSSRP LAGVLKKLSLCAPLVLAGYSAVMLLNVRGAGEKLAGIKPFSQQVSARWQQHYHQPVRFVGGDYLSQWLTFYIDDRPAVIT PWSVSQRPNIYNRTVREDRLLRDGVALVGPRGQNCGEADFSELLASWPALSVGYREEIAFVPHPGSSPIPICLAFVPPAT SK >Mature_482_residues MKTDRIILLGWCASYAMLWAGVTFLLDPTVPYDAIEAVNWAMNAEWGSPKNPWLVGMVMRPALGLSAPWLSFYWYATHFL AVAVGMYGVWQLAWRLSGDRRLAWLALLALNLSGVINFDIISFNDNYLLVMLWPWLWVFFLRAAFDRPGWWLAFAFTGGL ACMAKYSSLSFIFSAWMLTLWVPSIRRCYRQPVFYLAILLWLIIVAPNGWWLWQNDFAAFKWVDSQVSPGLTLHGLVSAL TVFYPLALLAAVLIGLRARLGWPGAPQARAALMMLLIPLAPILIWFSFHDGGRITEWLQPYMMPATALMMACVTQPSSRP LAGVLKKLSLCAPLVLAGYSAVMLLNVRGAGEKLAGIKPFSQQVSARWQQHYHQPVRFVGGDYLSQWLTFYIDDRPAVIT PWSVSQRPNIYNRTVREDRLLRDGVALVGPRGQNCGEADFSELLASWPALSVGYREEIAFVPHPGSSPIPICLAFVPPAT SK
Specific function: Unknown
COG id: COG1807
COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54166; Mature: 54166
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTDRIILLGWCASYAMLWAGVTFLLDPTVPYDAIEAVNWAMNAEWGSPKNPWLVGMVMR CCCCCEEEEHHHHHHHHHHHCHHHEECCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEHH PALGLSAPWLSFYWYATHFLAVAVGMYGVWQLAWRLSGDRRLAWLALLALNLSGVINFDI CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEEEE ISFNDNYLLVMLWPWLWVFFLRAAFDRPGWWLAFAFTGGLACMAKYSSLSFIFSAWMLTL EEECCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHH WVPSIRRCYRQPVFYLAILLWLIIVAPNGWWLWQNDFAAFKWVDSQVSPGLTLHGLVSAL HHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEECCCCCEEEEECCCCCCCCHHHHHHHHH TVFYPLALLAAVLIGLRARLGWPGAPQARAALMMLLIPLAPILIWFSFHDGGRITEWLQP HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHH YMMPATALMMACVTQPSSRPLAGVLKKLSLCAPLVLAGYSAVMLLNVRGAGEKLAGIKPF HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCH SQQVSARWQQHYHQPVRFVGGDYLSQWLTFYIDDRPAVITPWSVSQRPNIYNRTVREDRL HHHHHHHHHHHHCCHHHHHCHHHHHHHHEEEECCCCCEEECCCCCCCCCHHHHHHHHHHH LRDGVALVGPRGQNCGEADFSELLASWPALSVGYREEIAFVPHPGSSPIPICLAFVPPAT HHCCCEEECCCCCCCCCHHHHHHHHHCCCCCCCCHHCEEEECCCCCCCCCEEEEECCCCC SK CC >Mature Secondary Structure MKTDRIILLGWCASYAMLWAGVTFLLDPTVPYDAIEAVNWAMNAEWGSPKNPWLVGMVMR CCCCCEEEEHHHHHHHHHHHCHHHEECCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEHH PALGLSAPWLSFYWYATHFLAVAVGMYGVWQLAWRLSGDRRLAWLALLALNLSGVINFDI CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEEEE ISFNDNYLLVMLWPWLWVFFLRAAFDRPGWWLAFAFTGGLACMAKYSSLSFIFSAWMLTL EEECCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHH WVPSIRRCYRQPVFYLAILLWLIIVAPNGWWLWQNDFAAFKWVDSQVSPGLTLHGLVSAL HHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEECCCCCEEEEECCCCCCCCHHHHHHHHH TVFYPLALLAAVLIGLRARLGWPGAPQARAALMMLLIPLAPILIWFSFHDGGRITEWLQP HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHH YMMPATALMMACVTQPSSRPLAGVLKKLSLCAPLVLAGYSAVMLLNVRGAGEKLAGIKPF HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCH SQQVSARWQQHYHQPVRFVGGDYLSQWLTFYIDDRPAVITPWSVSQRPNIYNRTVREDRL HHHHHHHHHHHHCCHHHHHCHHHHHHHHEEEECCCCCEEECCCCCCCCCHHHHHHHHHHH LRDGVALVGPRGQNCGEADFSELLASWPALSVGYREEIAFVPHPGSSPIPICLAFVPPAT HHCCCEEECCCCCCCCCHHHHHHHHHCCCCCCCCHHCEEEECCCCCCCCCEEEEECCCCC SK CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA