Definition Sodalis glossinidius str. 'morsitans', complete genome.
Accession NC_007712
Length 4,171,146

Click here to switch to the map view.

The map label for this gene is 85059942

Identifier: 85059942

GI number: 85059942

Start: 3383711

End: 3384394

Strand: Reverse

Name: 85059942

Synonym: SG1964

Alternate gene names: NA

Gene position: 3384394-3383711 (Counterclockwise)

Preceding gene: 85059943

Following gene: 85059941

Centisome position: 81.14

GC content: 61.26

Gene sequence:

>684_bases
ATGACAGGCAAAACCCCGACGCTGCTTGATGTGGTCACACAAGCGGCCGCCGCCACGCGGCGGGATATCCATACCGCCCT
GCCCGGACGGGTTGTGGCACTGAATGCCGCTGAGAATACCCTCACCGTTGAGCCGATGATAAAACAGATCTTACGCAACG
GCGAAACTGTCGACCTGCCGCCCCTGGTGGATGTGCCTCTCCAGTTTCCGCGCGGCGGCGGTTTTGTCTTTACCGTCCCG
GTCGGCGCGGGCGATGAGGGCCTGATTGTTTTCTGCGAGCGCTGTTTCGATGGCTGGTTTGCCAGCGGCAATAAATCCGC
GCCGCTCGATGCCCGGCTGCACGATTACTCCGATGGTTTTTTCCTGCCGGGGATTTCCAGCCGACCGCGCGCCATCCCGG
ACTTGTATCTGGACGGTGCGTCGATGCAGAGCGTTGACGGCCAGACCTATATCCGCCTGTCGCCGGGGAAAATCAGCATA
CGGGGGCATATCGAGCATATCGGCAACAGCCGTCAGACCGGCAATCATGAACAGATTGGCGATATGAGCCAGACGGCGGG
CAGCAGCCACAGTCGCGGCACGGTATCGGCACACAGCATCGTCGCCGGGGATATCGCACTGGAAAGCCACACCCACGGCG
GCGTGGAAACCGGCAGCGGCAAAACAGGGAAACCCGGAACATGA

Upstream 100 bases:

>100_bases
TTTGATGGGGATTACAAAATTACTGAACTGACGCACACCGGCGATAGCTGGTTTACCACGCTGCTGTGTCTCGGCGGCGC
GTTTCAGAAGGTGAAAAACG

Downstream 100 bases:

>100_bases
GAGTAAGACGACTCGACGATAATCACGACTGGACATTTGGCCGCGGGCGCGCGAGCTATGCCTCTGGTGCCGACGCCCTG
CGGCAATGCCTTATCACTCG

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Phage Protein; Phage Related-Protein; Phage P2 Baseplate Assembly Protein GpV

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MTGKTPTLLDVVTQAAAATRRDIHTALPGRVVALNAAENTLTVEPMIKQILRNGETVDLPPLVDVPLQFPRGGGFVFTVP
VGAGDEGLIVFCERCFDGWFASGNKSAPLDARLHDYSDGFFLPGISSRPRAIPDLYLDGASMQSVDGQTYIRLSPGKISI
RGHIEHIGNSRQTGNHEQIGDMSQTAGSSHSRGTVSAHSIVAGDIALESHTHGGVETGSGKTGKPGT

Sequences:

>Translated_227_residues
MTGKTPTLLDVVTQAAAATRRDIHTALPGRVVALNAAENTLTVEPMIKQILRNGETVDLPPLVDVPLQFPRGGGFVFTVP
VGAGDEGLIVFCERCFDGWFASGNKSAPLDARLHDYSDGFFLPGISSRPRAIPDLYLDGASMQSVDGQTYIRLSPGKISI
RGHIEHIGNSRQTGNHEQIGDMSQTAGSSHSRGTVSAHSIVAGDIALESHTHGGVETGSGKTGKPGT
>Mature_226_residues
TGKTPTLLDVVTQAAAATRRDIHTALPGRVVALNAAENTLTVEPMIKQILRNGETVDLPPLVDVPLQFPRGGGFVFTVPV
GAGDEGLIVFCERCFDGWFASGNKSAPLDARLHDYSDGFFLPGISSRPRAIPDLYLDGASMQSVDGQTYIRLSPGKISIR
GHIEHIGNSRQTGNHEQIGDMSQTAGSSHSRGTVSAHSIVAGDIALESHTHGGVETGSGKTGKPGT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23894; Mature: 23763

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGKTPTLLDVVTQAAAATRRDIHTALPGRVVALNAAENTLTVEPMIKQILRNGETVDLP
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEHHHHHHHHHHCCCEECCC
PLVDVPLQFPRGGGFVFTVPVGAGDEGLIVFCERCFDGWFASGNKSAPLDARLHDYSDGF
CCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEHHHCCEECCCCCCCCCCCEEECCCCCE
FLPGISSRPRAIPDLYLDGASMQSVDGQTYIRLSPGKISIRGHIEHIGNSRQTGNHEQIG
EECCCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCEEEEEEEHHHCCCCCCCCCHHHHC
DMSQTAGSSHSRGTVSAHSIVAGDIALESHTHGGVETGSGKTGKPGT
CHHHHCCCCCCCCCEEHHEEEEEEEEEECCCCCCEECCCCCCCCCCC
>Mature Secondary Structure 
TGKTPTLLDVVTQAAAATRRDIHTALPGRVVALNAAENTLTVEPMIKQILRNGETVDLP
CCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEHHHHHHHHHHCCCEECCC
PLVDVPLQFPRGGGFVFTVPVGAGDEGLIVFCERCFDGWFASGNKSAPLDARLHDYSDGF
CCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEHHHCCEECCCCCCCCCCCEEECCCCCE
FLPGISSRPRAIPDLYLDGASMQSVDGQTYIRLSPGKISIRGHIEHIGNSRQTGNHEQIG
EECCCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCEEEEEEEHHHCCCCCCCCCHHHHC
DMSQTAGSSHSRGTVSAHSIVAGDIALESHTHGGVETGSGKTGKPGT
CHHHHCCCCCCCCCEEHHEEEEEEEEEECCCCCCEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA