| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85059900
Identifier: 85059900
GI number: 85059900
Start: 3319760
End: 3320674
Strand: Reverse
Name: 85059900
Synonym: SG1922
Alternate gene names: NA
Gene position: 3320674-3319760 (Counterclockwise)
Preceding gene: 85059901
Following gene: 85059899
Centisome position: 79.61
GC content: 55.63
Gene sequence:
>915_bases ATGTATGGTGGTCTGGCGCTGACGCTATTGGCGTTATTTTTCAGCGGCGGTTCAGCCGCCGTCTGCGCCTCGTTTATACT GGCGAATATAGGCGTGGGCGCCATCAGCTGCGGCTTGTATACACACACCGCGCTTACGGCCGATGACGTAGCGCTGAAAA AACGCGCCTGGACGAACGCACTAATGGGGCTAATTTTTACCGCACTGGGCGGGGCAGCAGATGGCTATCAAGTGATGCGC GCGGCGGGCAGCCGCGGCAGCCAGGTGTTATTCAATAGTTATCTTACGCTGCACGATGTGCTTAAGGCCGGACACTCTCG TCTTTCTCTTGCCTCGGTGGAGGAAACCTTTATCAAAACCGACGCGCGCGGTCGGGCGATTATCCTCGTTGAAAGTTTGA TCAAAGAGGGCAAGCATAACTTGAGCCAGTTCGGGTTCAGCAGCGCCGAGGCCATGTTGCGTATAAATCAAATTACCGGC CACATTAATTTTCATCGGTATCAGTCTTTACACTTGCTGGGCAACATGCGCCGTTTTTTCCGAGAACTGGTGGTGATTAC CGGGCGTCAGGCTTTAAAAATGGTGCCGCGCGGCTATGAACTGGCCGTATTCGGCCATGCCGGCGAACGGGCCGAAATAA TGCTCATCAGCCTAGGCGACGGCCTGTTTGGCGGTTATCAATTGGCGCCGATTAACGGCAAGCGTGCGTTGCAAGATGCC TGGGGAACGGTAACGCTGGACGAGTTTACCTTCGTTGGGGATAACCTGCTGCTTGCCGATGGGCGACGGGTGCAACTGAT GGTGGAAGATTACCGGCCGTTACCGTTATCAAATCAAATGCAGCCGCTATTGCCTGCATTTGGCGCGCCGGGGAGATCAA AGCGAGCGGCTGGCCGCGGCCCAAGCCTTCGCTAA
Upstream 100 bases:
>100_bases AGTATCTGCACGATTATGCGCAAATGCAGCGCCCGGGACATTATCAGTAACCGTACCCGACACCGCGGCTGATCCGCACC ATACCGCTCAGCAGGTTCTG
Downstream 100 bases:
>100_bases CGCTAATGCCTTCAAGTCTATCGAATGTCGGGTACTGTTTTACTGGTTGGAGTCGGCAGATTACCAGGAAATGCACCATT ACCTGCTGGTGGCGGAGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MYGGLALTLLALFFSGGSAAVCASFILANIGVGAISCGLYTHTALTADDVALKKRAWTNALMGLIFTALGGAADGYQVMR AAGSRGSQVLFNSYLTLHDVLKAGHSRLSLASVEETFIKTDARGRAIILVESLIKEGKHNLSQFGFSSAEAMLRINQITG HINFHRYQSLHLLGNMRRFFRELVVITGRQALKMVPRGYELAVFGHAGERAEIMLISLGDGLFGGYQLAPINGKRALQDA WGTVTLDEFTFVGDNLLLADGRRVQLMVEDYRPLPLSNQMQPLLPAFGAPGRSKRAAGRGPSLR
Sequences:
>Translated_304_residues MYGGLALTLLALFFSGGSAAVCASFILANIGVGAISCGLYTHTALTADDVALKKRAWTNALMGLIFTALGGAADGYQVMR AAGSRGSQVLFNSYLTLHDVLKAGHSRLSLASVEETFIKTDARGRAIILVESLIKEGKHNLSQFGFSSAEAMLRINQITG HINFHRYQSLHLLGNMRRFFRELVVITGRQALKMVPRGYELAVFGHAGERAEIMLISLGDGLFGGYQLAPINGKRALQDA WGTVTLDEFTFVGDNLLLADGRRVQLMVEDYRPLPLSNQMQPLLPAFGAPGRSKRAAGRGPSLR >Mature_304_residues MYGGLALTLLALFFSGGSAAVCASFILANIGVGAISCGLYTHTALTADDVALKKRAWTNALMGLIFTALGGAADGYQVMR AAGSRGSQVLFNSYLTLHDVLKAGHSRLSLASVEETFIKTDARGRAIILVESLIKEGKHNLSQFGFSSAEAMLRINQITG HINFHRYQSLHLLGNMRRFFRELVVITGRQALKMVPRGYELAVFGHAGERAEIMLISLGDGLFGGYQLAPINGKRALQDA WGTVTLDEFTFVGDNLLLADGRRVQLMVEDYRPLPLSNQMQPLLPAFGAPGRSKRAAGRGPSLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32843; Mature: 32843
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYGGLALTLLALFFSGGSAAVCASFILANIGVGAISCGLYTHTALTADDVALKKRAWTNA CCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEHHHHHHHCCCHHHHHHHHHHHHHH LMGLIFTALGGAADGYQVMRAAGSRGSQVLFNSYLTLHDVLKAGHSRLSLASVEETFIKT HHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHC DARGRAIILVESLIKEGKHNLSQFGFSSAEAMLRINQITGHINFHRYQSLHLLGNMRRFF CCCCCEEEEHHHHHHHHHHHHHHCCCCCHHHHEEEEHHHCEEEHHHHHHHHHHHHHHHHH RELVVITGRQALKMVPRGYELAVFGHAGERAEIMLISLGDGLFGGYQLAPINGKRALQDA HHHHHHCCCHHHHHCCCCEEEEEEECCCCCEEEEEEEECCCCCCCEEEECCCCCHHHHHC WGTVTLDEFTFVGDNLLLADGRRVQLMVEDYRPLPLSNQMQPLLPAFGAPGRSKRAAGRG CCEEEEEEEEEECCCEEEECCCEEEEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCC PSLR CCCC >Mature Secondary Structure MYGGLALTLLALFFSGGSAAVCASFILANIGVGAISCGLYTHTALTADDVALKKRAWTNA CCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEHHHHHHHCCCHHHHHHHHHHHHHH LMGLIFTALGGAADGYQVMRAAGSRGSQVLFNSYLTLHDVLKAGHSRLSLASVEETFIKT HHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHC DARGRAIILVESLIKEGKHNLSQFGFSSAEAMLRINQITGHINFHRYQSLHLLGNMRRFF CCCCCEEEEHHHHHHHHHHHHHHCCCCCHHHHEEEEHHHCEEEHHHHHHHHHHHHHHHHH RELVVITGRQALKMVPRGYELAVFGHAGERAEIMLISLGDGLFGGYQLAPINGKRALQDA HHHHHHCCCHHHHHCCCCEEEEEEECCCCCEEEEEEEECCCCCCCEEEECCCCCHHHHHC WGTVTLDEFTFVGDNLLLADGRRVQLMVEDYRPLPLSNQMQPLLPAFGAPGRSKRAAGRG CCEEEEEEEEEECCCEEEECCCEEEEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCC PSLR CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA