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The map label for this gene is dppA [H]

Identifier: 85059874

GI number: 85059874

Start: 3258231

End: 3258746

Strand: Reverse

Name: dppA [H]

Synonym: SG1896

Alternate gene names: 85059874

Gene position: 3258746-3258231 (Counterclockwise)

Preceding gene: 85059878

Following gene: 85059872

Centisome position: 78.13

GC content: 60.66

Gene sequence:

>516_bases
ATGCGGGTATTTATTTCGGCGGATATCGAGGGCGTAGCCGGTCGCGAACAGTGCCGGGCCGGCAGCGCTGATTATCCGCT
GGCGCGTGCGTTGATGGAGCAGGAAGTCAATGCCGCGATCGATGGGGCCTTCGCCGGCGGCGCCAGCGAGGTGGTAGTGG
CCGACAGCCACGGCGCGATGGAAAATCTGCGCGCCAACAGAATAGACCCGCGCGCGCGACTGCTGCAGGGTAAGCCGCGG
CCGTTCTCCATGGTGGAAGGATTACAACAGCAGATTTTCGACTGCATGATGTTTATCGGCTACCACAGCGCTGCCGGAGA
ATTCGGCGTGCTGGCCCATACCATCAATGGCTGGGCATTTTACCGCGTAACGCTCAACGACGAAGTCATGGCCGAAAGCG
ATCTTTACGCCGCCCTAGGCGCGGAACTGAAGACGCCGCTATGGCTGGTCAGCGGGGACGATAAACTACAGCTCTGGGAT
CGCGCGGCATTACCCCTTTGCCGGTTCCGTCAATGA

Upstream 100 bases:

>100_bases
AGCACCAGCCCCGTCACCGGTTTTCGCGGGCATCATCGTCCCGCACTGCGGCAGGTGTTAAATCGCCTGGCGCAGCAATA
TCTCGTTTAAGGAGCCGCAC

Downstream 100 bases:

>100_bases
CTAGAGCACTTTTCATCTATTCCGGTTTTTTCGCATATAGCACTGCCTCAGTAGATAGAATTCCTAATCCACAGATGCGC
TGAAATAGATGAAAACCGCT

Product: putative transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MRVFISADIEGVAGREQCRAGSADYPLARALMEQEVNAAIDGAFAGGASEVVVADSHGAMENLRANRIDPRARLLQGKPR
PFSMVEGLQQQIFDCMMFIGYHSAAGEFGVLAHTINGWAFYRVTLNDEVMAESDLYAALGAELKTPLWLVSGDDKLQLWD
RAALPLCRFRQ

Sequences:

>Translated_171_residues
MRVFISADIEGVAGREQCRAGSADYPLARALMEQEVNAAIDGAFAGGASEVVVADSHGAMENLRANRIDPRARLLQGKPR
PFSMVEGLQQQIFDCMMFIGYHSAAGEFGVLAHTINGWAFYRVTLNDEVMAESDLYAALGAELKTPLWLVSGDDKLQLWD
RAALPLCRFRQ
>Mature_171_residues
MRVFISADIEGVAGREQCRAGSADYPLARALMEQEVNAAIDGAFAGGASEVVVADSHGAMENLRANRIDPRARLLQGKPR
PFSMVEGLQQQIFDCMMFIGYHSAAGEFGVLAHTINGWAFYRVTLNDEVMAESDLYAALGAELKTPLWLVSGDDKLQLWD
RAALPLCRFRQ

Specific function: Hydrolyzes N-terminal residues in D-amino acid containing peptides. Among the tested substrates, the highest activities are with D-Ala-D-Ala and D-Ala-Gly-Gly. The physiological role is not clear [H]

COG id: COG2362

COG function: function code E; D-aminopeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M55 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007035 [H]

Pfam domain/function: PF04951 Peptidase_M55 [H]

EC number: NA

Molecular weight: Translated: 18765; Mature: 18765

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVFISADIEGVAGREQCRAGSADYPLARALMEQEVNAAIDGAFAGGASEVVVADSHGAM
CEEEEECCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCH
ENLRANRIDPRARLLQGKPRPFSMVEGLQQQIFDCMMFIGYHSAAGEFGVLAHTINGWAF
HHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCEEE
YRVTLNDEVMAESDLYAALGAELKTPLWLVSGDDKLQLWDRAALPLCRFRQ
EEEEECCCHHHHHHHHHHHCCCCCCCEEEEECCCCEEEHHHHCCCHHHCCC
>Mature Secondary Structure
MRVFISADIEGVAGREQCRAGSADYPLARALMEQEVNAAIDGAFAGGASEVVVADSHGAM
CEEEEECCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCH
ENLRANRIDPRARLLQGKPRPFSMVEGLQQQIFDCMMFIGYHSAAGEFGVLAHTINGWAF
HHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCEEE
YRVTLNDEVMAESDLYAALGAELKTPLWLVSGDDKLQLWDRAALPLCRFRQ
EEEEECCCHHHHHHHHHHHCCCCCCCEEEEECCCCEEEHHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1766370; 9384377 [H]