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The map label for this gene is arnF [H]

Identifier: 85059817

GI number: 85059817

Start: 3124330

End: 3124743

Strand: Reverse

Name: arnF [H]

Synonym: SG1839

Alternate gene names: 85059817

Gene position: 3124743-3124330 (Counterclockwise)

Preceding gene: 85059818

Following gene: 85059816

Centisome position: 74.91

GC content: 60.87

Gene sequence:

>414_bases
GTGCATGGGGGTGAATTTGTGATGGGCTACGGCTGGGCGTTGTTCAGCGTGGCGTTGGTCAGCGCCGCACAGCTGCTGTT
GAAATGGGTAATGATGCATTTGCCGCCGCTTGGCGCCCTCCGACTTTGGCTGGACCCGGCTTACGCGGAACCCCTCGCTT
TGCTGATGGGGGGCTTGCTGGCCTATGTCTGTTCCATGGGATGCTGGTTTATGGCGCTGCGCCGTTTGCCGTTGAATAAA
GCCTATCCGCTGCTCAGCCTGAGTTATGTCCTGGTGGCCGCTTGCGCGCTGATGATCCCCGAATTCAATGAGCGGTTTAC
GTTTTCGCGCCTGATGGGCGTGGCGCTAATTTGCGGCGGCCTGTTGTTGATTTGCCTGCCCGCCGGCGGCAAGGGCGACA
CGCCGCGCCGCTGA

Upstream 100 bases:

>100_bases
TCAATTTTGTGCTGGTGACCCTGGCCGCCCGTTGGCTGTGGCGAGAACCTGTATCGTTACGCCACGGCTGCGGTCTGCTG
CTGATAGTCGCAGGCGTGAT

Downstream 100 bases:

>100_bases
GATATCCAACGACGGCAAGGGCGACACGCCGCGCCCTGGCGATTATCGGCGTGGTCCTAATGTTGCCTTCAGGTCAGGGT
GGCATAATAGGCCACTGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: L-Ara4N-phosphoundecaprenol flippase subunit ArnF; Undecaprenyl phosphate-aminoarabinose flippase subunit ArnF [H]

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MHGGEFVMGYGWALFSVALVSAAQLLLKWVMMHLPPLGALRLWLDPAYAEPLALLMGGLLAYVCSMGCWFMALRRLPLNK
AYPLLSLSYVLVAACALMIPEFNERFTFSRLMGVALICGGLLLICLPAGGKGDTPRR

Sequences:

>Translated_137_residues
MHGGEFVMGYGWALFSVALVSAAQLLLKWVMMHLPPLGALRLWLDPAYAEPLALLMGGLLAYVCSMGCWFMALRRLPLNK
AYPLLSLSYVLVAACALMIPEFNERFTFSRLMGVALICGGLLLICLPAGGKGDTPRR
>Mature_137_residues
MHGGEFVMGYGWALFSVALVSAAQLLLKWVMMHLPPLGALRLWLDPAYAEPLALLMGGLLAYVCSMGCWFMALRRLPLNK
AYPLLSLSYVLVAACALMIPEFNERFTFSRLMGVALICGGLLLICLPAGGKGDTPRR

Specific function: Translocates 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol (alpha-L-Ara4N-phosphoundecaprenol) from the cytoplasmic to the periplasmic side of the inner membrane [H]

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ArnF family [H]

Homologues:

Organism=Escherichia coli, GI87082075, Length=133, Percent_Identity=41.3533834586466, Blast_Score=75, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620
- InterPro:   IPR022832 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 14962; Mature: 14962

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
6.6 %Met     (Translated Protein)
10.2 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
6.6 %Met     (Mature Protein)
10.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHGGEFVMGYGWALFSVALVSAAQLLLKWVMMHLPPLGALRLWLDPAYAEPLALLMGGLL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHHHHHHHHHH
AYVCSMGCWFMALRRLPLNKAYPLLSLSYVLVAACALMIPEFNERFTFSRLMGVALICGG
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
LLLICLPAGGKGDTPRR
HHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MHGGEFVMGYGWALFSVALVSAAQLLLKWVMMHLPPLGALRLWLDPAYAEPLALLMGGLL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHHHHHHHHHH
AYVCSMGCWFMALRRLPLNKAYPLLSLSYVLVAACALMIPEFNERFTFSRLMGVALICGG
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
LLLICLPAGGKGDTPRR
HHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA