Click here to switch to the map view.

The map label for this gene is 85059796

Identifier: 85059796

GI number: 85059796

Start: 3086688

End: 3087350

Strand: Reverse

Name: 85059796

Synonym: SG1818

Alternate gene names: NA

Gene position: 3087350-3086688 (Counterclockwise)

Preceding gene: 85059797

Following gene: 85059795

Centisome position: 74.02

GC content: 58.22

Gene sequence:

>663_bases
GTGGCGCAGGCGGTGGGCGATATCGTCAACGGCACTTACGATAGCTCACAAATCTCCGCGCGGGACGCGACACAACGACT
CCGCCAGTATGCCGACATCATCAGTCCATGGGCCGAAACCGTGGCCACGCGTATGCTGAACGGCGTCGCACACCAAGAGG
AAAAACAATGGCGTACGCTATCCCGTGACATTTCGGCAGAACTGCGCCATCAAATGAAAAACACCGCCATTGGTCAGGCG
GCCCGCAGCATTATTGAGGAAAATATCCAGTGGATGAAGTCTGCCCCACTGCATGCGGCTGACCGGATCGCGGATATCCA
ATCTCAGGCTATCGAAGCCATGATCCGCGGCGAGCGCCCCACCGCATTGATGGACGCTCTTTTGCGTACCGGAGAGGTGG
CCAAATCCCGCGCCAGACTGATTTCCCGCACGGAAATTGCTCGTGCCACCCAGGCACTGACACAGGCGCGGGCCACGGCT
ATCGGCTCTGAGGGCTATATCTGGCGCACGGCCCATGATCCTGATGTTCGTCATTCTCATGCCCATATGGAAGGCACGTT
TGTGCGCTGGGAAAATCCGCCTACGCTGGACGGCATGACCGGTCATGCGGGCACGTTACCCAATTGCCGCTGTTACTGCG
ACGTCGTGATACCGGAAAACTAA

Upstream 100 bases:

>100_bases
ATTGAGGATGCGAAAGACATCGACCCGCCCGCGTCCGGCGATTTCCACGCGCCAGACCTCGACGCGACAGGAAAGGCTTT
ACGCGACCCAACTGCGTAAG

Downstream 100 bases:

>100_bases
CCATGAAATATTTCTTTAAGACGCGGCTGGGGGAAACCCGTTACCTCATGGCTGATGGCTCGCTATTGTGCGAAGCCGTC
CCCGTCGCCCGCACCGGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MAQAVGDIVNGTYDSSQISARDATQRLRQYADIISPWAETVATRMLNGVAHQEEKQWRTLSRDISAELRHQMKNTAIGQA
ARSIIEENIQWMKSAPLHAADRIADIQSQAIEAMIRGERPTALMDALLRTGEVAKSRARLISRTEIARATQALTQARATA
IGSEGYIWRTAHDPDVRHSHAHMEGTFVRWENPPTLDGMTGHAGTLPNCRCYCDVVIPEN

Sequences:

>Translated_220_residues
MAQAVGDIVNGTYDSSQISARDATQRLRQYADIISPWAETVATRMLNGVAHQEEKQWRTLSRDISAELRHQMKNTAIGQA
ARSIIEENIQWMKSAPLHAADRIADIQSQAIEAMIRGERPTALMDALLRTGEVAKSRARLISRTEIARATQALTQARATA
IGSEGYIWRTAHDPDVRHSHAHMEGTFVRWENPPTLDGMTGHAGTLPNCRCYCDVVIPEN
>Mature_219_residues
AQAVGDIVNGTYDSSQISARDATQRLRQYADIISPWAETVATRMLNGVAHQEEKQWRTLSRDISAELRHQMKNTAIGQAA
RSIIEENIQWMKSAPLHAADRIADIQSQAIEAMIRGERPTALMDALLRTGEVAKSRARLISRTEIARATQALTQARATAI
GSEGYIWRTAHDPDVRHSHAHMEGTFVRWENPPTLDGMTGHAGTLPNCRCYCDVVIPEN

Specific function: Unknown

COG id: COG2369

COG function: function code S; Uncharacterized protein, homolog of phage Mu protein gp30

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To E.coli plasmid IncP-alpha RP4 protein traN [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006528 [H]

Pfam domain/function: PF04233 Phage_Mu_F [H]

EC number: NA

Molecular weight: Translated: 24454; Mature: 24323

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQAVGDIVNGTYDSSQISARDATQRLRQYADIISPWAETVATRMLNGVAHQEEKQWRTL
CCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRDISAELRHQMKNTAIGQAARSIIEENIQWMKSAPLHAADRIADIQSQAIEAMIRGERP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCC
TALMDALLRTGEVAKSRARLISRTEIARATQALTQARATAIGSEGYIWRTAHDPDVRHSH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHH
AHMEGTFVRWENPPTLDGMTGHAGTLPNCRCYCDVVIPEN
CCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCC
>Mature Secondary Structure 
AQAVGDIVNGTYDSSQISARDATQRLRQYADIISPWAETVATRMLNGVAHQEEKQWRTL
CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRDISAELRHQMKNTAIGQAARSIIEENIQWMKSAPLHAADRIADIQSQAIEAMIRGERP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCC
TALMDALLRTGEVAKSRARLISRTEIARATQALTQARATAIGSEGYIWRTAHDPDVRHSH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHH
AHMEGTFVRWENPPTLDGMTGHAGTLPNCRCYCDVVIPEN
CCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]