| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85059667
Identifier: 85059667
GI number: 85059667
Start: 2892065
End: 2893618
Strand: Reverse
Name: 85059667
Synonym: SG1689
Alternate gene names: NA
Gene position: 2893618-2892065 (Counterclockwise)
Preceding gene: 85059668
Following gene: 85059666
Centisome position: 69.37
GC content: 59.46
Gene sequence:
>1554_bases ATGGATGAACTCGCCGTCAAGCTGATTACGCGTGCTGATGCGCTAAAATCCCATCGCCAGCGGCATGAAAGCGTCTGGAG CGAGTGCTACGACTACACCTATCCGTTGCGTGGCGCCGGTTTTTCAGCTGACGTGCTGGACGCACAGAGCGCTAAGTCGA AGGTGGCGAAGCTGCTGGACGGTACCGCCACCGATAGCGCCCGCATGCTGGCCTCGGCGCTCATGTCCGGCATGACCCCG GCCAACGCACAGTGGCTCAATCTCGACTGTGAATCGCTGGCTGACGAGGACAAGGCCTGGCTCTCCACCTGTGCCACATT GGTATGGGAGAACATCCACGCTGCTAATTTTGACGCGGAAGGCTATGAGGAGAATCTTGACGTCGTGTGCGCGGGCTGGT TCGTGCTGTACATCGACGAGAACCGGGAGGAGGGCGGCTATACGTTCCAGCAGTGGCCACTGTCGCAATGCTACGTTGCG TCAACCCGCAAAGACGGCATTGTCGATACGATTTATCGCTGCTACCAGATGACCGCCGAGCAGGCTATCGCCGAGTTCGG GGAGGCGGGCGTCAGCGAGAAAATACGCCGTGCTGCCAGGGATAAGCCGGATGACAAGTTTGATTTCTTGCACGCGATAT TCCCGCGTACGAATTATGGGGTAAACGCCTGTTTGGCTAAGCATTTACGCTTTGCCTCTTTTCACGTGGAGAGACAGGGA AAGCGCATAGTGCGAGAATCGGGTTACCACGAATTCCCGGTTTGCGTACCGCGCTGGATGAAAATCCCTGGCGGCGCGTA CGGCATTGGCCCGGTATATGATGCGTTGCCAGACTGCAAGGAGCTGAACGAAACCAAACGCATGGAGAAGGCCGCGCAGG ATTTGGCCATTTCGGGCATGTGGATTTCCGAGGATGACGGTGTCATAAATCCGTACTCCGTCAAGGTCGGCCCGCGCCGT ATTATTGTGGCGAGCAGCGTGAACAGTATGAAGCCCTTACTCACCGGGGCTGATTTTCAGGTCGCGTTTACCGCGGAAGA CCGCCTGCAGGCCAGCATTCGCAAAATCATGATGGCCGACCAGCTGCAACCACAGGATGGTCCGGCGATGACCGCGACCG AAGTCCATGTCCGCGTTGCCCTGATCCGCCAACTGTTGGGGCCGGTCTACGGCCGGTTTCAGGCGGAATACCTGCAACCG CTGGTTGAGCGCTGTTTCGGTATTGCCTTCCGCGCAGGCGTCTTCCCGCCTCCCCCGGACAGCATGCAAACCGCGCATTT TAATGTGCTCTATATCTCTCCGCTGGCCCGCGCACAGAAGCTGGAGGACGTGACGGCGGTTGAACGTCTTGGCGCGAACG TGGCGCAGCTCTCTCAGGTTAGCCCGGAGGTCGTAGATCTGGTTGACACCGATGAGGCGACGCGCGTGGTGGCCGATGCG CTAGGCGTACCGGCGAAGGTGATCCGCTCGGCGGCGGATGTCACCAGCCTACGCGACCAGCGCGCCAGGGCGCAGCAGCA AGCGCAACAGCAGCTGATGATGCAGGCCGGGTAG
Upstream 100 bases:
>100_bases TTTGCTGGCCAGTGGTGCAGAAGGGGCCGCGGACTCAGGCAGCTCTTTGTTGTCTTCGGGCGCGCAACCGGCGCAGAAAA AGGCATTAGGGGCGTAACCA
Downstream 100 bases:
>100_bases GAGGCCGCCAGCGCCGCCGGGCAGGCCGCGGGGAGCGTGCCGTGCTAGATTTCATTCTCATGAGAATTAACCAGGCTGAC GGAGTATACGACGATGTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 517; Mature: 517
Protein sequence:
>517_residues MDELAVKLITRADALKSHRQRHESVWSECYDYTYPLRGAGFSADVLDAQSAKSKVAKLLDGTATDSARMLASALMSGMTP ANAQWLNLDCESLADEDKAWLSTCATLVWENIHAANFDAEGYEENLDVVCAGWFVLYIDENREEGGYTFQQWPLSQCYVA STRKDGIVDTIYRCYQMTAEQAIAEFGEAGVSEKIRRAARDKPDDKFDFLHAIFPRTNYGVNACLAKHLRFASFHVERQG KRIVRESGYHEFPVCVPRWMKIPGGAYGIGPVYDALPDCKELNETKRMEKAAQDLAISGMWISEDDGVINPYSVKVGPRR IIVASSVNSMKPLLTGADFQVAFTAEDRLQASIRKIMMADQLQPQDGPAMTATEVHVRVALIRQLLGPVYGRFQAEYLQP LVERCFGIAFRAGVFPPPPDSMQTAHFNVLYISPLARAQKLEDVTAVERLGANVAQLSQVSPEVVDLVDTDEATRVVADA LGVPAKVIRSAADVTSLRDQRARAQQQAQQQLMMQAG
Sequences:
>Translated_517_residues MDELAVKLITRADALKSHRQRHESVWSECYDYTYPLRGAGFSADVLDAQSAKSKVAKLLDGTATDSARMLASALMSGMTP ANAQWLNLDCESLADEDKAWLSTCATLVWENIHAANFDAEGYEENLDVVCAGWFVLYIDENREEGGYTFQQWPLSQCYVA STRKDGIVDTIYRCYQMTAEQAIAEFGEAGVSEKIRRAARDKPDDKFDFLHAIFPRTNYGVNACLAKHLRFASFHVERQG KRIVRESGYHEFPVCVPRWMKIPGGAYGIGPVYDALPDCKELNETKRMEKAAQDLAISGMWISEDDGVINPYSVKVGPRR IIVASSVNSMKPLLTGADFQVAFTAEDRLQASIRKIMMADQLQPQDGPAMTATEVHVRVALIRQLLGPVYGRFQAEYLQP LVERCFGIAFRAGVFPPPPDSMQTAHFNVLYISPLARAQKLEDVTAVERLGANVAQLSQVSPEVVDLVDTDEATRVVADA LGVPAKVIRSAADVTSLRDQRARAQQQAQQQLMMQAG >Mature_517_residues MDELAVKLITRADALKSHRQRHESVWSECYDYTYPLRGAGFSADVLDAQSAKSKVAKLLDGTATDSARMLASALMSGMTP ANAQWLNLDCESLADEDKAWLSTCATLVWENIHAANFDAEGYEENLDVVCAGWFVLYIDENREEGGYTFQQWPLSQCYVA STRKDGIVDTIYRCYQMTAEQAIAEFGEAGVSEKIRRAARDKPDDKFDFLHAIFPRTNYGVNACLAKHLRFASFHVERQG KRIVRESGYHEFPVCVPRWMKIPGGAYGIGPVYDALPDCKELNETKRMEKAAQDLAISGMWISEDDGVINPYSVKVGPRR IIVASSVNSMKPLLTGADFQVAFTAEDRLQASIRKIMMADQLQPQDGPAMTATEVHVRVALIRQLLGPVYGRFQAEYLQP LVERCFGIAFRAGVFPPPPDSMQTAHFNVLYISPLARAQKLEDVTAVERLGANVAQLSQVSPEVVDLVDTDEATRVVADA LGVPAKVIRSAADVTSLRDQRARAQQQAQQQLMMQAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57345; Mature: 57345
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDELAVKLITRADALKSHRQRHESVWSECYDYTYPLRGAGFSADVLDAQSAKSKVAKLLD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC GTATDSARMLASALMSGMTPANAQWLNLDCESLADEDKAWLSTCATLVWENIHAANFDAE CCCCHHHHHHHHHHHHCCCCCCCEEEECCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCC GYEENLDVVCAGWFVLYIDENREEGGYTFQQWPLSQCYVASTRKDGIVDTIYRCYQMTAE CCCCCCCEEEEEEEEEEEECCCCCCCCCHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHH QAIAEFGEAGVSEKIRRAARDKPDDKFDFLHAIFPRTNYGVNACLAKHLRFASFHVERQG HHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH KRIVRESGYHEFPVCVPRWMKIPGGAYGIGPVYDALPDCKELNETKRMEKAAQDLAISGM HHHHHHCCCCCCCCCCHHHHCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHEEECE WISEDDGVINPYSVKVGPRRIIVASSVNSMKPLLTGADFQVAFTAEDRLQASIRKIMMAD EECCCCCCCCCEEEEECCEEEEEECCCCHHCHHHCCCCEEEEECCHHHHHHHHHHHHHHH QLQPQDGPAMTATEVHVRVALIRQLLGPVYGRFQAEYLQPLVERCFGIAFRAGVFPPPPD CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC SMQTAHFNVLYISPLARAQKLEDVTAVERLGANVAQLSQVSPEVVDLVDTDEATRVVADA CCCCCEEEEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHCCCHHHHHHHHH LGVPAKVIRSAADVTSLRDQRARAQQQAQQQLMMQAG HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDELAVKLITRADALKSHRQRHESVWSECYDYTYPLRGAGFSADVLDAQSAKSKVAKLLD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC GTATDSARMLASALMSGMTPANAQWLNLDCESLADEDKAWLSTCATLVWENIHAANFDAE CCCCHHHHHHHHHHHHCCCCCCCEEEECCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCC GYEENLDVVCAGWFVLYIDENREEGGYTFQQWPLSQCYVASTRKDGIVDTIYRCYQMTAE CCCCCCCEEEEEEEEEEEECCCCCCCCCHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHH QAIAEFGEAGVSEKIRRAARDKPDDKFDFLHAIFPRTNYGVNACLAKHLRFASFHVERQG HHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH KRIVRESGYHEFPVCVPRWMKIPGGAYGIGPVYDALPDCKELNETKRMEKAAQDLAISGM HHHHHHCCCCCCCCCCHHHHCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHEEECE WISEDDGVINPYSVKVGPRRIIVASSVNSMKPLLTGADFQVAFTAEDRLQASIRKIMMAD EECCCCCCCCCEEEEECCEEEEEECCCCHHCHHHCCCCEEEEECCHHHHHHHHHHHHHHH QLQPQDGPAMTATEVHVRVALIRQLLGPVYGRFQAEYLQPLVERCFGIAFRAGVFPPPPD CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC SMQTAHFNVLYISPLARAQKLEDVTAVERLGANVAQLSQVSPEVVDLVDTDEATRVVADA CCCCCEEEEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHCCCHHHHHHHHH LGVPAKVIRSAADVTSLRDQRARAQQQAQQQLMMQAG HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA