| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85059645
Identifier: 85059645
GI number: 85059645
Start: 2842271
End: 2843512
Strand: Reverse
Name: 85059645
Synonym: SG1667
Alternate gene names: NA
Gene position: 2843512-2842271 (Counterclockwise)
Preceding gene: 85059646
Following gene: 85059644
Centisome position: 68.17
GC content: 50.08
Gene sequence:
>1242_bases ATGAATAGTGTGCAACTGCCTATTCCAGCAAAACTTGTCCCATTATTCACTGTGCCCAATAAACGTTATCGCTGTGCATA CGGTGGGCGTGGCAGTGCAAAAACGCGCATCTTTGCGCTAATGACGGCGGTTAAGGCTTATCAGGCAGCAAGAAACAGTG AGTCAGGCGTCATACTTTGCGCGCGTGAGTTTATGAACTCGCTGGAAGAGTCGAGTATGCAGGAAGTGAAACTGGCAATA CAGTCAGTGCCATGGCTGGCGGCTCACTTTGATATCGGTGAAAAATACATTCGCACCCTCGACAGGCGAGTGAGCTATGT GTTCAGTGGACTTCGGCATAATCTTGACAGTATCAAATCGAAAGCACGTATTCTGCTGTGCTGGGTGGATGAGGCTGAAA CCGTTAGCGAAATAGCCTGGCAGAAACTCGATCCCACCGTACGAGAGCCTGGCTCTGAAGTATGGGTAACATGGAACCCT GAGACAGAGGGTAGCGCGACCGATAAGCGATTTCGCAAGGATAGTGATGACGCCATTATCGCGGTTGAAATGAACTACAT GGATAATCCATGGTTTCACAGTGTGCTTGAGCAAGTGAGGCAGCGGGACCTCCGTATGCTTGACTCGGCAACCTATGCCT GGATTTGGGAAGGCGCGTATCTGGAAAACGCTAATAAGCAGGTCATGAGTGGGAAATATGTGTTTGAAACGTTCCCGGAT GATCTGTGGAAGCAGGCCGATCGGCTGTTCTTTGGTGCCGATTTTGGCTTTGCGCAAGATCCAAATACGCTGATACGCAT GTTCATACTGGATAACCGACTCTACATTGAATACGAGGCTTACGGTGTTGGCGTTGAACTGGATGAAATGCCCCAATTTT ATGATGCGATCCCCGAAGTCAGACGATGGCCGATTAAAGGTGATTCGTCGAGACCGGAAACCATAAGCTGGCTATCCCGT CAGGGATTTAACATCGATGCGGCTGTCAAGTGGCAGGGCAGCGTGGAAGACGGCATCACTTACCTGCGAGGATTTGAAAA GATAGTCATTCACCCTTGCTGCAAAGAAACCGCTAAAGAAGCGCGATTGTACGCCTACAAAACCGACCGTATCACAGGCG ACGTTCTCCCTGTCATCGTCGACGCCTATAACCACTGCTGGGACGCCATTCGCTACGGCCTTGATGGCTATATTACGGCA AGGGGTGGGTTTGGGACCTGGATAGCATTAGGGCGTAAATAA
Upstream 100 bases:
>100_bases CATGGCTATTCGGACAAACAAGAAGTCGATAATAAATCTTCAGATGGCAGCATGGCCATTAGCCCAACGATGATTCAGCT TGTACCGGTAGAAGCAAAGC
Downstream 100 bases:
>100_bases TCATCAACAGCGTGAGGCATTATGTCACGAAAAAACAGAAGCCGCGTGGACGTCAGTCAGGCGACGGCGGACAGCTATGA CAACTTTATCGCCCGCGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 413; Mature: 413
Protein sequence:
>413_residues MNSVQLPIPAKLVPLFTVPNKRYRCAYGGRGSAKTRIFALMTAVKAYQAARNSESGVILCAREFMNSLEESSMQEVKLAI QSVPWLAAHFDIGEKYIRTLDRRVSYVFSGLRHNLDSIKSKARILLCWVDEAETVSEIAWQKLDPTVREPGSEVWVTWNP ETEGSATDKRFRKDSDDAIIAVEMNYMDNPWFHSVLEQVRQRDLRMLDSATYAWIWEGAYLENANKQVMSGKYVFETFPD DLWKQADRLFFGADFGFAQDPNTLIRMFILDNRLYIEYEAYGVGVELDEMPQFYDAIPEVRRWPIKGDSSRPETISWLSR QGFNIDAAVKWQGSVEDGITYLRGFEKIVIHPCCKETAKEARLYAYKTDRITGDVLPVIVDAYNHCWDAIRYGLDGYITA RGGFGTWIALGRK
Sequences:
>Translated_413_residues MNSVQLPIPAKLVPLFTVPNKRYRCAYGGRGSAKTRIFALMTAVKAYQAARNSESGVILCAREFMNSLEESSMQEVKLAI QSVPWLAAHFDIGEKYIRTLDRRVSYVFSGLRHNLDSIKSKARILLCWVDEAETVSEIAWQKLDPTVREPGSEVWVTWNP ETEGSATDKRFRKDSDDAIIAVEMNYMDNPWFHSVLEQVRQRDLRMLDSATYAWIWEGAYLENANKQVMSGKYVFETFPD DLWKQADRLFFGADFGFAQDPNTLIRMFILDNRLYIEYEAYGVGVELDEMPQFYDAIPEVRRWPIKGDSSRPETISWLSR QGFNIDAAVKWQGSVEDGITYLRGFEKIVIHPCCKETAKEARLYAYKTDRITGDVLPVIVDAYNHCWDAIRYGLDGYITA RGGFGTWIALGRK >Mature_413_residues MNSVQLPIPAKLVPLFTVPNKRYRCAYGGRGSAKTRIFALMTAVKAYQAARNSESGVILCAREFMNSLEESSMQEVKLAI QSVPWLAAHFDIGEKYIRTLDRRVSYVFSGLRHNLDSIKSKARILLCWVDEAETVSEIAWQKLDPTVREPGSEVWVTWNP ETEGSATDKRFRKDSDDAIIAVEMNYMDNPWFHSVLEQVRQRDLRMLDSATYAWIWEGAYLENANKQVMSGKYVFETFPD DLWKQADRLFFGADFGFAQDPNTLIRMFILDNRLYIEYEAYGVGVELDEMPQFYDAIPEVRRWPIKGDSSRPETISWLSR QGFNIDAAVKWQGSVEDGITYLRGFEKIVIHPCCKETAKEARLYAYKTDRITGDVLPVIVDAYNHCWDAIRYGLDGYITA RGGFGTWIALGRK
Specific function: Unknown
COG id: COG1783
COG function: function code R; Phage terminase large subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006701 - InterPro: IPR006437 [H]
Pfam domain/function: PF04466 Terminase_3 [H]
EC number: NA
Molecular weight: Translated: 47399; Mature: 47399
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSVQLPIPAKLVPLFTVPNKRYRCAYGGRGSAKTRIFALMTAVKAYQAARNSESGVILC CCCCCCCCCCEEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEE AREFMNSLEESSMQEVKLAIQSVPWLAAHFDIGEKYIRTLDRRVSYVFSGLRHNLDSIKS HHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCC KARILLCWVDEAETVSEIAWQKLDPTVREPGSEVWVTWNPETEGSATDKRFRKDSDDAII CCEEEEEECCCHHHHHHHHHHHCCCHHHCCCCEEEEEECCCCCCCCCHHHHCCCCCCEEE AVEMNYMDNPWFHSVLEQVRQRDLRMLDSATYAWIWEGAYLENANKQVMSGKYVFETFPD EEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHCCCCHHHHCCCEEEECCCH DLWKQADRLFFGADFGFAQDPNTLIRMFILDNRLYIEYEAYGVGVELDEMPQFYDAIPEV HHHHHHHHEEEECCCCCCCCHHHHEEEEEECCEEEEEEEEEECCCCHHHHHHHHHHHHHH RRWPIKGDSSRPETISWLSRQGFNIDAAVKWQGSVEDGITYLRGFEKIVIHPCCKETAKE HCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCHHEEECHHHHHHHHH ARLYAYKTDRITGDVLPVIVDAYNHCWDAIRYGLDGYITARGGFGTWIALGRK CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCC >Mature Secondary Structure MNSVQLPIPAKLVPLFTVPNKRYRCAYGGRGSAKTRIFALMTAVKAYQAARNSESGVILC CCCCCCCCCCEEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEE AREFMNSLEESSMQEVKLAIQSVPWLAAHFDIGEKYIRTLDRRVSYVFSGLRHNLDSIKS HHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCC KARILLCWVDEAETVSEIAWQKLDPTVREPGSEVWVTWNPETEGSATDKRFRKDSDDAII CCEEEEEECCCHHHHHHHHHHHCCCHHHCCCCEEEEEECCCCCCCCCHHHHCCCCCCEEE AVEMNYMDNPWFHSVLEQVRQRDLRMLDSATYAWIWEGAYLENANKQVMSGKYVFETFPD EEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHCCCCHHHHCCCEEEECCCH DLWKQADRLFFGADFGFAQDPNTLIRMFILDNRLYIEYEAYGVGVELDEMPQFYDAIPEV HHHHHHHHEEEECCCCCCCCHHHHEEEEEECCEEEEEEEEEECCCCHHHHHHHHHHHHHH RRWPIKGDSSRPETISWLSRQGFNIDAAVKWQGSVEDGITYLRGFEKIVIHPCCKETAKE HCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCHHEEECHHHHHHHHH ARLYAYKTDRITGDVLPVIVDAYNHCWDAIRYGLDGYITARGGFGTWIALGRK CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]