| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85059632
Identifier: 85059632
GI number: 85059632
Start: 2826948
End: 2827601
Strand: Reverse
Name: 85059632
Synonym: SG1654
Alternate gene names: NA
Gene position: 2827601-2826948 (Counterclockwise)
Preceding gene: 85059633
Following gene: 85059631
Centisome position: 67.79
GC content: 53.52
Gene sequence:
>654_bases ATGAGGGATTACACCGACTTCGTGACGCCGCAGCATTGGGCGGCGCCAAAGTTTGTGCGCCATATCCAGCTTATGACGCG GCCGCTTCAAGATATCGCCGCGCTGGCGGGCCAGCTTAACGCGCTGTTCAGCCTGGAGGGCGCCTTTGGGAAACAACTGG ATGCCATCGGAGAGTGGATAGGGCTATCGCGCTATGTGAAAACACCGATTACCGGGGTGTATTTTGCCCTCGATACTGAC CGGGTGGGATTCGACCAGGGCAGCTGGAAAAGGCGCTTTGATGCCGACAGCGGTTTTACCGAGCTGGATGATGAGACCTA CCGCGCCATACTGCGGGCCAAAATTCGAGCCAATCACTGGGACGGTACCTGTGAGATGTTGGCGGCTATTTATCAAGGGG TGATACCGGATAGAACGGTGAATATCTTCTTTACCGACAATCAGGATATGTCGATGGACGTCTATCTGACCGGCGGGGTG GTGCCTGAAGTCATCAAGGCGGTAATACGTCAGGGGTATCTCAATATCAAACCAGAAGGGGTGAAGCTCAATGCCTACAG TGGCTCAGAGGGCGACAACGGCATTTTTGGTTTTGATATCCGTAATGGTTATGTGGATGGATTTGATACCGGCAGCTGGT CGGTAAAACTGTAA
Upstream 100 bases:
>100_bases TCGGGCGCTCGGCCCAAGCGGTTAAAGAAGAGAATCTGCTTGTGGCCTTCAATGAGGCGCTCAGCGGCACAACCGAGCAT CTCACTTTGGTGGTGACCAC
Downstream 100 bases:
>100_bases GGAATAATGATGGCCAAGAATGAATTTTTACCGTTTGCGACGGCAGACGGCGCTAACGTTTTGTCGGCGGAAGACTATCA GACGTTGCGCTCGCGCAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MRDYTDFVTPQHWAAPKFVRHIQLMTRPLQDIAALAGQLNALFSLEGAFGKQLDAIGEWIGLSRYVKTPITGVYFALDTD RVGFDQGSWKRRFDADSGFTELDDETYRAILRAKIRANHWDGTCEMLAAIYQGVIPDRTVNIFFTDNQDMSMDVYLTGGV VPEVIKAVIRQGYLNIKPEGVKLNAYSGSEGDNGIFGFDIRNGYVDGFDTGSWSVKL
Sequences:
>Translated_217_residues MRDYTDFVTPQHWAAPKFVRHIQLMTRPLQDIAALAGQLNALFSLEGAFGKQLDAIGEWIGLSRYVKTPITGVYFALDTD RVGFDQGSWKRRFDADSGFTELDDETYRAILRAKIRANHWDGTCEMLAAIYQGVIPDRTVNIFFTDNQDMSMDVYLTGGV VPEVIKAVIRQGYLNIKPEGVKLNAYSGSEGDNGIFGFDIRNGYVDGFDTGSWSVKL >Mature_217_residues MRDYTDFVTPQHWAAPKFVRHIQLMTRPLQDIAALAGQLNALFSLEGAFGKQLDAIGEWIGLSRYVKTPITGVYFALDTD RVGFDQGSWKRRFDADSGFTELDDETYRAILRAKIRANHWDGTCEMLAAIYQGVIPDRTVNIFFTDNQDMSMDVYLTGGV VPEVIKAVIRQGYLNIKPEGVKLNAYSGSEGDNGIFGFDIRNGYVDGFDTGSWSVKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24323; Mature: 24323
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDYTDFVTPQHWAAPKFVRHIQLMTRPLQDIAALAGQLNALFSLEGAFGKQLDAIGEWI CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHH GLSRYVKTPITGVYFALDTDRVGFDQGSWKRRFDADSGFTELDDETYRAILRAKIRANHW HHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC DGTCEMLAAIYQGVIPDRTVNIFFTDNQDMSMDVYLTGGVVPEVIKAVIRQGYLNIKPEG CCHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEEECCCHHHHHHHHHHCCCCEECCCC VKLNAYSGSEGDNGIFGFDIRNGYVDGFDTGSWSVKL EEEEEECCCCCCCCEEEEEECCCEECCCCCCCEEEEC >Mature Secondary Structure MRDYTDFVTPQHWAAPKFVRHIQLMTRPLQDIAALAGQLNALFSLEGAFGKQLDAIGEWI CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHH GLSRYVKTPITGVYFALDTDRVGFDQGSWKRRFDADSGFTELDDETYRAILRAKIRANHW HHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC DGTCEMLAAIYQGVIPDRTVNIFFTDNQDMSMDVYLTGGVVPEVIKAVIRQGYLNIKPEG CCHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEEECCCHHHHHHHHHHCCCCEECCCC VKLNAYSGSEGDNGIFGFDIRNGYVDGFDTGSWSVKL EEEEEECCCCCCCCEEEEEECCCEECCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA