| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85059620
Identifier: 85059620
GI number: 85059620
Start: 2806595
End: 2807191
Strand: Reverse
Name: 85059620
Synonym: SG1642
Alternate gene names: NA
Gene position: 2807191-2806595 (Counterclockwise)
Preceding gene: 85059621
Following gene: 85059619
Centisome position: 67.3
GC content: 56.95
Gene sequence:
>597_bases ATGCTGAGAACCATTAAACTTAAGGGGGCGCTGGGCAAACGCTTTGGTCGCACCCATCGTTACCATGTTGCTGATGTGAA AGAGGCACTCCGGGCGCTTTGTGTCACGCTGCCCGGCTTTGAAAACACTATGAGTAACGCCCACCATGACGGTATTCGTT TTGCCTTTTTTAACGGCACGGAAAATATTGGCATTGAGCAGTTTGAGATGAGCAAGGGTGACCGGGATATCGTTATTATG CCGGTGATTGAAGGGGCCAAACCCGGAGGTTTTTTACAGGTGGTGTTAGGTGCCGCCGCGCTGGCCGGGGCCTTTTTTAC CGCAGGAACCTCGCTGGCGCTGTTCGGCGTGGCGGCATCAACCCTGCTGACTGGCCTCGGGACCTCGATGCTGCTGGGCG GGGTGGTAAAGCTGATGACGCCGCAGCCCAATTACGGCGTCGGGAAATCATCGAGTGCCGACAATAAACCCAACTATGCT TTTGGCGCGCCTGTCAACACGGTGGCGATGGACTACCCGGTGCCGGTGTTGTACGGCCAGCGGGAAATCGGCGGTGCGGT CATCAGCGCCGGTGTTTTTGCCAGCGACCAGCAGTAG
Upstream 100 bases:
>100_bases ATGCTTCACCATCTGTTTGGCAAACTGTCGGCGCGAACGCCGTATGGCCGCTATTACCGCGACAGGACGGTGCGCATCGT GCGCCACAAGGAGCGTTTAC
Downstream 100 bases:
>100_bases GTAAACCATGCAACTGCTTAAAAACGCGACAATAATTCAGGGGGCCAAAGGCGGTGGCGGTGGCGGTCATACGCCGACGG AGCAGAGCACCCGCTGTCGG
Product: putative phage tail assembly protein
Products: NA
Alternate protein names: Bacteriophage Lambda Tail Assembly Protein I; Lambda Tail Assembly I; Bacteriophage Lambda Tail Assembly I; Bacteriophage Protein; Gp63 Phage Protein
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MLRTIKLKGALGKRFGRTHRYHVADVKEALRALCVTLPGFENTMSNAHHDGIRFAFFNGTENIGIEQFEMSKGDRDIVIM PVIEGAKPGGFLQVVLGAAALAGAFFTAGTSLALFGVAASTLLTGLGTSMLLGGVVKLMTPQPNYGVGKSSSADNKPNYA FGAPVNTVAMDYPVPVLYGQREIGGAVISAGVFASDQQ
Sequences:
>Translated_198_residues MLRTIKLKGALGKRFGRTHRYHVADVKEALRALCVTLPGFENTMSNAHHDGIRFAFFNGTENIGIEQFEMSKGDRDIVIM PVIEGAKPGGFLQVVLGAAALAGAFFTAGTSLALFGVAASTLLTGLGTSMLLGGVVKLMTPQPNYGVGKSSSADNKPNYA FGAPVNTVAMDYPVPVLYGQREIGGAVISAGVFASDQQ >Mature_198_residues MLRTIKLKGALGKRFGRTHRYHVADVKEALRALCVTLPGFENTMSNAHHDGIRFAFFNGTENIGIEQFEMSKGDRDIVIM PVIEGAKPGGFLQVVLGAAALAGAFFTAGTSLALFGVAASTLLTGLGTSMLLGGVVKLMTPQPNYGVGKSSSADNKPNYA FGAPVNTVAMDYPVPVLYGQREIGGAVISAGVFASDQQ
Specific function: Unknown
COG id: COG4723
COG function: function code S; Phage-related protein, tail component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20781; Mature: 20781
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRTIKLKGALGKRFGRTHRYHVADVKEALRALCVTLPGFENTMSNAHHDGIRFAFFNGT CCEEEEECCHHHHHHCCCCCEEHHHHHHHHHHHHHHCCCCHHHHCCCCCCCEEEEEECCC ENIGIEQFEMSKGDRDIVIMPVIEGAKPGGFLQVVLGAAALAGAFFTAGTSLALFGVAAS CCCCCEEEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH TLLTGLGTSMLLGGVVKLMTPQPNYGVGKSSSADNKPNYAFGAPVNTVAMDYPVPVLYGQ HHHHHCCHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCEEECCCCCEEEECCCCCEEECC REIGGAVISAGVFASDQQ HHHCCCEEECCEECCCCC >Mature Secondary Structure MLRTIKLKGALGKRFGRTHRYHVADVKEALRALCVTLPGFENTMSNAHHDGIRFAFFNGT CCEEEEECCHHHHHHCCCCCEEHHHHHHHHHHHHHHCCCCHHHHCCCCCCCEEEEEECCC ENIGIEQFEMSKGDRDIVIMPVIEGAKPGGFLQVVLGAAALAGAFFTAGTSLALFGVAAS CCCCCEEEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH TLLTGLGTSMLLGGVVKLMTPQPNYGVGKSSSADNKPNYAFGAPVNTVAMDYPVPVLYGQ HHHHHCCHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCEEECCCCCEEEECCCCCEEECC REIGGAVISAGVFASDQQ HHHCCCEEECCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA