| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is nuoI
Identifier: 85059572
GI number: 85059572
Start: 2739356
End: 2739898
Strand: Reverse
Name: nuoI
Synonym: SG1594
Alternate gene names: 85059572
Gene position: 2739898-2739356 (Counterclockwise)
Preceding gene: 85059573
Following gene: 85059571
Centisome position: 65.69
GC content: 57.27
Gene sequence:
>543_bases ATGACGTTAAAAGAGTTAGCGATCGGCTGCGGGACCACGCTGCGCAGCATCTGGATGATTGGCATGCAGGCGTTCAACAA GCGTGAAACCCGCATGTACCCGGACGTGCCTGTTAATCCGCCACCCCGTTTCCGCGGGCGGATCGTGCTGACGCGCGATC CCGACGGCGATGAGCGCTGCGTGGCCTGTAACCTGTGCGCGGTCGCCTGCCCGGTCGACTGTATTTCGCTGCAAAAGGCG GAGACCAAAGACGGGCGCTGGTACCCGGAATTCTTTCGTATCAATTTTTCCCGCTGTATCTTCTGCGGCCTGTGCGAAGA AGCCTGTCCCACCACCGCCATCCAGCTCACGCCGGATTTCGAGATGGGCGAGTTCAAACGGCAGGATCTGGTGTATGAGA AAGACGATTTACTGATTTCAGGGCCGGGTAAATACCCGGAATATAACTTCTACCGCATGGCCGGTATGGCGATTGCTGGC AAGGACAAGGGCGAGGCGGAAAACGAAGCCAAACCTATCGACGTGAAAGGTTTGCTGCCCTAA
Upstream 100 bases:
>100_bases TGGCGCTGGGCTGGAAAATCTGCCTGCCGCTGACGCTGCTCAATTTGTTGGCGACCGCAGCGGTCATCTTGTACAACGCG CATTAAGGGGTGGATGAATC
Downstream 100 bases:
>100_bases GGAGACTGGCATGGAACTGGCGTTTTATCTTTCCGGTCTGGTGGCGGTGCTGGCGACGTTGCGCGTCATCACCCATACCC AGCCGGTACATGCGCTGCTG
Product: NADH dehydrogenase subunit I
Products: NA
Alternate protein names: NADH dehydrogenase I subunit I; NDH-1 subunit I
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MTLKELAIGCGTTLRSIWMIGMQAFNKRETRMYPDVPVNPPPRFRGRIVLTRDPDGDERCVACNLCAVACPVDCISLQKA ETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEFKRQDLVYEKDDLLISGPGKYPEYNFYRMAGMAIAG KDKGEAENEAKPIDVKGLLP
Sequences:
>Translated_180_residues MTLKELAIGCGTTLRSIWMIGMQAFNKRETRMYPDVPVNPPPRFRGRIVLTRDPDGDERCVACNLCAVACPVDCISLQKA ETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEFKRQDLVYEKDDLLISGPGKYPEYNFYRMAGMAIAG KDKGEAENEAKPIDVKGLLP >Mature_179_residues TLKELAIGCGTTLRSIWMIGMQAFNKRETRMYPDVPVNPPPRFRGRIVLTRDPDGDERCVACNLCAVACPVDCISLQKAE TKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEFKRQDLVYEKDDLLISGPGKYPEYNFYRMAGMAIAGK DKGEAENEAKPIDVKGLLP
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat
COG id: COG1143
COG function: function code C; Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains
Homologues:
Organism=Homo sapiens, GI4505371, Length=137, Percent_Identity=37.956204379562, Blast_Score=96, Evalue=1e-20, Organism=Escherichia coli, GI1788617, Length=180, Percent_Identity=89.4444444444444, Blast_Score=336, Evalue=5e-94, Organism=Escherichia coli, GI1789075, Length=105, Percent_Identity=33.3333333333333, Blast_Score=66, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17555194, Length=145, Percent_Identity=36.551724137931, Blast_Score=97, Evalue=5e-21, Organism=Drosophila melanogaster, GI17864306, Length=131, Percent_Identity=38.1679389312977, Blast_Score=101, Evalue=3e-22,
Paralogues:
None
Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NUOI_SODGM (Q2NSK6)
Other databases:
- EMBL: AP008232 - RefSeq: YP_455274.1 - ProteinModelPortal: Q2NSK6 - SMR: Q2NSK6 - STRING: Q2NSK6 - GeneID: 3867889 - GenomeReviews: AP008232_GR - KEGG: sgl:SG1594 - NMPDR: fig|343509.6.peg.3402 - eggNOG: COG1143 - HOGENOM: HBG724359 - OMA: RYWSVAG - PhylomeDB: Q2NSK6 - ProtClustDB: PRK05888 - BioCyc: SGLO343509:SG1594-MONOMER - HAMAP: MF_01351 - InterPro: IPR001450 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR012285 - InterPro: IPR010226 - Gene3D: G3DSA:1.10.1060.10 - TIGRFAMs: TIGR01971
Pfam domain/function: PF00037 Fer4
EC number: =1.6.99.5
Molecular weight: Translated: 20320; Mature: 20189
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: PS00198 4FE4S_FER_1; PS51379 4FE4S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 9.4 %Cys+Met (Translated Protein) 5.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 8.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLKELAIGCGTTLRSIWMIGMQAFNKRETRMYPDVPVNPPPRFRGRIVLTRDPDGDERC CCHHHHHHHCCHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCEEEEEECCCCCCEE VACNLCAVACPVDCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF EEEEEEEECCCHHHHHCCCCCCCCCCCCCHHEEECHHHEEEEEHHHHCCCCCEEEECCCC EMGEFKRQDLVYEKDDLLISGPGKYPEYNFYRMAGMAIAGKDKGEAENEAKPIDVKGLLP CCCCHHHHCCCEECCCEEEECCCCCCCCCEEEEECEEEECCCCCCCCCCCCCCCEECCCC >Mature Secondary Structure TLKELAIGCGTTLRSIWMIGMQAFNKRETRMYPDVPVNPPPRFRGRIVLTRDPDGDERC CHHHHHHHCCHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCEEEEEECCCCCCEE VACNLCAVACPVDCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF EEEEEEEECCCHHHHHCCCCCCCCCCCCCHHEEECHHHEEEEEHHHHCCCCCEEEECCCC EMGEFKRQDLVYEKDDLLISGPGKYPEYNFYRMAGMAIAGKDKGEAENEAKPIDVKGLLP CCCCHHHHCCCEECCCEEEECCCCCCCCCEEEEECEEEECCCCCCCCCCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA