| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85059545
Identifier: 85059545
GI number: 85059545
Start: 2679190
End: 2679507
Strand: Reverse
Name: 85059545
Synonym: SG1567
Alternate gene names: NA
Gene position: 2679507-2679190 (Counterclockwise)
Preceding gene: 85059546
Following gene: 85059538
Centisome position: 64.24
GC content: 58.18
Gene sequence:
>318_bases ATGAGCAAAAAAAACCACCAGGCCATGACGCTGGCGACCCCCATTATTCGCGGCAATGACACCATTACGGCCGTCACGAT CACCGATGATATCAAACAGGCAGGGTCGCTGCGCGGGCTGAGGCTGGTCAACGTGTTGAACCTCGACACGGACGCCATCA CCACACTGCTGGAGCGCGTCACGTCTCCCCATTTCAAGACCAAAGAAAGCGCCGAAATGGACACCCGTGATTTCGTCGGC CTCTCGGAGGAGCTGATGCCTTTTTTGACGCCGCCGGGGCATGGCGAATCGAGCGAGGCGGAGACGGAAAACCCGTAA
Upstream 100 bases:
>100_bases GCAAAAACCTCTACCCGGACCGCATCATCTCAGCCCTGGGCATGGGGAGCTGAGGCCATTCACACAGGGCGGCGAAGGCC GCCGCACGGAGCAGACGACA
Downstream 100 bases:
>100_bases CGCTATTACAGTTTGACCAGATCGACGATCTGGTCGCTGATATTGCCGTTGTTTTTAACTGGCCTCCCTCTGAAATCTTC AGCATGGCACTGGCCGAGGT
Product: putative phage tail protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 105; Mature: 104
Protein sequence:
>105_residues MSKKNHQAMTLATPIIRGNDTITAVTITDDIKQAGSLRGLRLVNVLNLDTDAITTLLERVTSPHFKTKESAEMDTRDFVG LSEELMPFLTPPGHGESSEAETENP
Sequences:
>Translated_105_residues MSKKNHQAMTLATPIIRGNDTITAVTITDDIKQAGSLRGLRLVNVLNLDTDAITTLLERVTSPHFKTKESAEMDTRDFVG LSEELMPFLTPPGHGESSEAETENP >Mature_104_residues SKKNHQAMTLATPIIRGNDTITAVTITDDIKQAGSLRGLRLVNVLNLDTDAITTLLERVTSPHFKTKESAEMDTRDFVGL SEELMPFLTPPGHGESSEAETENP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11479; Mature: 11348
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKNHQAMTLATPIIRGNDTITAVTITDDIKQAGSLRGLRLVNVLNLDTDAITTLLERV CCCCCCCEEEEECCEEECCCEEEEEEECCCHHHCCCCCCEEEEEEECCCHHHHHHHHHHH TSPHFKTKESAEMDTRDFVGLSEELMPFLTPPGHGESSEAETENP CCCCCCCCCCCCCCCHHHCCCCHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure SKKNHQAMTLATPIIRGNDTITAVTITDDIKQAGSLRGLRLVNVLNLDTDAITTLLERV CCCCCCEEEEECCEEECCCEEEEEEECCCHHHCCCCCCEEEEEEECCCHHHHHHHHHHH TSPHFKTKESAEMDTRDFVGLSEELMPFLTPPGHGESSEAETENP CCCCCCCCCCCCCCCHHHCCCCHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA