| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
Click here to switch to the map view.
The map label for this gene is 85059536
Identifier: 85059536
GI number: 85059536
Start: 2657264
End: 2657653
Strand: Reverse
Name: 85059536
Synonym: SG1558
Alternate gene names: NA
Gene position: 2657653-2657264 (Counterclockwise)
Preceding gene: 85059537
Following gene: 85059535
Centisome position: 63.72
GC content: 57.69
Gene sequence:
>390_bases GTGATGCGCTGGAAACTCCTCACACTCGCCGCGATGCTCTCGACGATTATCGCTCTCGCTATCGTGGTGAGAGTTCAGTA CGTCGAAATCACCCGTTTAAAACAGACCAACCAATCGATGGTCGCCGAGCGTGACGTCGCCCGCGCACAGTTTACCCACT ATGAACAGGTGTTAGCACTGTTCAACCAGATAGCCGGAGCAACACAGGATGCACATCAGCAAGCCGTGCAGGACTTCCAG CCGCGCATTATCCAGATACGCGAGGCCATTACGTCGGCTCGCGGTGCTTGTCTGCCTGTGCCTGCCAGTGTTGTTAACGG GCTGCGGGCACACACAGACAAGATATCTGCCCATCCCGCCCGCGCCGATACCGGCCACGCTGCTCGATGA
Upstream 100 bases:
>100_bases GCTGTGGTCGGATTTCGTTTGGCGTTGCCAGTGTGGAGCAGGCCAAAATCCTTCTTGATGTTTTGCTTGCTATGGCTAAT CGCAAATCAAAGCGGGATAA
Downstream 100 bases:
>100_bases CTGTCCACCTCCTGTTATTCCGGAGCACATGACCTGGGGCGACAGCGTGATACTCAACGAGAAGCTGCTGCTGGCGCTGG AGATATGCAATCAGGATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MMRWKLLTLAAMLSTIIALAIVVRVQYVEITRLKQTNQSMVAERDVARAQFTHYEQVLALFNQIAGATQDAHQQAVQDFQ PRIIQIREAITSARGACLPVPASVVNGLRAHTDKISAHPARADTGHAAR
Sequences:
>Translated_129_residues MMRWKLLTLAAMLSTIIALAIVVRVQYVEITRLKQTNQSMVAERDVARAQFTHYEQVLALFNQIAGATQDAHQQAVQDFQ PRIIQIREAITSARGACLPVPASVVNGLRAHTDKISAHPARADTGHAAR >Mature_129_residues MMRWKLLTLAAMLSTIIALAIVVRVQYVEITRLKQTNQSMVAERDVARAQFTHYEQVLALFNQIAGATQDAHQQAVQDFQ PRIIQIREAITSARGACLPVPASVVNGLRAHTDKISAHPARADTGHAAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14240; Mature: 14240
Theoretical pI: Translated: 10.67; Mature: 10.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRWKLLTLAAMLSTIIALAIVVRVQYVEITRLKQTNQSMVAERDVARAQFTHYEQVLAL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FNQIAGATQDAHQQAVQDFQPRIIQIREAITSARGACLPVPASVVNGLRAHTDKISAHPA HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCC RADTGHAAR CCCCCCCCC >Mature Secondary Structure MMRWKLLTLAAMLSTIIALAIVVRVQYVEITRLKQTNQSMVAERDVARAQFTHYEQVLAL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FNQIAGATQDAHQQAVQDFQPRIIQIREAITSARGACLPVPASVVNGLRAHTDKISAHPA HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCC RADTGHAAR CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA