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The map label for this gene is pspC [H]

Identifier: 85059479

GI number: 85059479

Start: 2518304

End: 2518882

Strand: Reverse

Name: pspC [H]

Synonym: SG1501

Alternate gene names: 85059479

Gene position: 2518882-2518304 (Counterclockwise)

Preceding gene: 85059480

Following gene: 85059478

Centisome position: 60.39

GC content: 56.48

Gene sequence:

>579_bases
ATGGATGCCCTGCTAGTCGTGCTCGCCATACCGCTGACTATTTTTATCTTGTTTGTCGCGCCTGTCTGGTTATGGCTGCA
CCACAACAGCCGTCGTCAACAGGGAAGCCGCCTGGGTCAGCAGGATACGCAGCGGCTTATGCAGCCACCCGCGACGCCGA
GCGCATGCAGGCGCTGGAAGATATTCTTGACGCGGAACACCTTAACTGGAGGCAGGAATAAGATAACGGTTGATTTAAGC
AAAAAACTCTACCGCCGCCCCGATGAGGGCATGATCTGCGGGGTGTGCGCCGGGATTGCCCACTATTTCGACGTCCCGAC
GCGGTTGGTGAGGATTATTGTTGTGCTGTCGATGATCTTTGGCCTGTTTATGTTAACGCTGCTGGCCTATGGAATTTTGG
CGTTTTGGCTGGAGCCCGCGCCGCCGTCAGCTTATCAGGGACACGAAGGGTTGGCACCCGGCCAGCAATTGGATCGCGCG
GATGCGCTATTGGCCGATAGCGAACGGCAGTTGCGTCGGGTGGAAAGGTATGTCACATCGCCGGCGTTTAACCTGCGTAA
CCGGCTCCGTCAATTATGA

Upstream 100 bases:

>100_bases
ATAAGCTGCATCACGACTGAACGCTGTGCCGCCGGGCTGAAAACGTGTTGCTACGCGCCGCCGCGGCCTGCGGAATGTAA
AGATCACTTAAGGAGAAATC

Downstream 100 bases:

>100_bases
TCGCGCTTGTCCGTTTCATATTATTGGCGTTATTGAGCCGGATACCCGCCGCCTTAAGCACCCGGCTATTAGCGCGCATC
GCCCGCTGCGGCTCGCGCTC

Product: phage shock protein C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MDALLVVLAIPLTIFILFVAPVWLWLHHNSRRQQGSRLGQQDTQRLMQPPATPSACRRWKIFLTRNTLTGGRNKITVDLS
KKLYRRPDEGMICGVCAGIAHYFDVPTRLVRIIVVLSMIFGLFMLTLLAYGILAFWLEPAPPSAYQGHEGLAPGQQLDRA
DALLADSERQLRRVERYVTSPAFNLRNRLRQL

Sequences:

>Translated_192_residues
MDALLVVLAIPLTIFILFVAPVWLWLHHNSRRQQGSRLGQQDTQRLMQPPATPSACRRWKIFLTRNTLTGGRNKITVDLS
KKLYRRPDEGMICGVCAGIAHYFDVPTRLVRIIVVLSMIFGLFMLTLLAYGILAFWLEPAPPSAYQGHEGLAPGQQLDRA
DALLADSERQLRRVERYVTSPAFNLRNRLRQL
>Mature_192_residues
MDALLVVLAIPLTIFILFVAPVWLWLHHNSRRQQGSRLGQQDTQRLMQPPATPSACRRWKIFLTRNTLTGGRNKITVDLS
KKLYRRPDEGMICGVCAGIAHYFDVPTRLVRIIVVLSMIFGLFMLTLLAYGILAFWLEPAPPSAYQGHEGLAPGQQLDRA
DALLADSERQLRRVERYVTSPAFNLRNRLRQL

Specific function: The phage shock protein (psp) operon (pspABCDE) may play a significant role in the competition for survival under nutrient- or energy-limited conditions. PspC is involved in transcription regulation [H]

COG id: COG1983

COG function: function code KT; Putative stress-responsive transcriptional regulator

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PspC family [H]

Homologues:

Organism=Escherichia coli, GI1787564, Length=116, Percent_Identity=55.1724137931034, Blast_Score=128, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007168
- InterPro:   IPR014320 [H]

Pfam domain/function: PF04024 PspC [H]

EC number: NA

Molecular weight: Translated: 21864; Mature: 21864

Theoretical pI: Translated: 10.89; Mature: 10.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDALLVVLAIPLTIFILFVAPVWLWLHHNSRRQQGSRLGQQDTQRLMQPPATPSACRRWK
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHH
IFLTRNTLTGGRNKITVDLSKKLYRRPDEGMICGVCAGIAHYFDVPTRLVRIIVVLSMIF
HEEEECCCCCCCCEEEEEHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLFMLTLLAYGILAFWLEPAPPSAYQGHEGLAPGQQLDRADALLADSERQLRRVERYVTS
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHC
PAFNLRNRLRQL
CHHHHHHHHHCC
>Mature Secondary Structure
MDALLVVLAIPLTIFILFVAPVWLWLHHNSRRQQGSRLGQQDTQRLMQPPATPSACRRWK
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHH
IFLTRNTLTGGRNKITVDLSKKLYRRPDEGMICGVCAGIAHYFDVPTRLVRIIVVLSMIF
HEEEECCCCCCCCEEEEEHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLFMLTLLAYGILAFWLEPAPPSAYQGHEGLAPGQQLDRADALLADSERQLRRVERYVTS
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHC
PAFNLRNRLRQL
CHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]