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The map label for this gene is yciC [C]

Identifier: 85059361

GI number: 85059361

Start: 2292061

End: 2292813

Strand: Reverse

Name: yciC [C]

Synonym: SG1383

Alternate gene names: 85059361

Gene position: 2292813-2292061 (Counterclockwise)

Preceding gene: 85059362

Following gene: 85059360

Centisome position: 54.97

GC content: 56.71

Gene sequence:

>753_bases
ATGCCAATTATGGCAAGTACCCTGTACCGCGACATGCTGAATTTTTTCCGTAATCAGTTTGCCAGTATCCTGCTGTTGGC
GCTGTTGACGGCGCTGATAAGCGTCGTGCTGGGCCATGCGCTGTCGCCGGGAAGTGAGCAACTGATGACCCTGAGCGACG
GTACTCATCTCGGCGATACCGCCGAGATGAGTCTGCAACAGCTGGTACAGCAGATGTCAGTGGAACAGCAACGGGTATTG
CTGAAAGCTTCCGCCGCCGGCACTCTGGCGGGTCTGGTCGGCAATGTGCTTTTAGCCGGCGGGCTGCTGACCATGATCCG
CCAAGTGTCCAACCGCCAGCCCGTCAGCGTATTGCGCGCCATCGGCCTGTCGGCGCCGCTGTTGCCGCGCCTGTTGCTGC
TTATCTTTCTTACTACGCTGCTGGTACAACTGGGACTGCTGTTGATTATCGTACCGGGAATCCTGCTGGCCATCGCCTTT
AGCCTGGCGCCGGTCATCGCCACCAGTGACGATCTGGGCGCTATCAAATCAATGCGCCAGAGCTCCAGTCTGGCGTTTGC
CAATCTTCGTCTGTTGGCGCCGGCGGTCTTGTTCTGGCTACTAGCGAAGGCGGCGGTTTTACTGCTGGCCACTCAGTTCA
CTCTGGTGTCATCGTTGGTGGCGGTGGTATTATTGAATGGATTGAGCAATCTGATTTCCGCCCTGCTACTAATCTATCTT
TATCGTCTGTATATGCTGCTGCGGCAGGCCTGA

Upstream 100 bases:

>100_bases
GCGCTCGCCCCCGGATGATGCATTAGGGTGCCAAGCCGTGGATTAACAGGGTAGAATAGCGGGCTAGCCTAATCGTTGAT
TGTTTTACCAAGGAGCCCCC

Downstream 100 bases:

>100_bases
TGGACGTCGTTTACCCTCTTTACCGGTGGATTTTGTTATGAAGCAGTTTCTGGATTTTTTGCCCTTGGTGGTGTTTTTTA
TCGTCTATAATCTCTACGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MPIMASTLYRDMLNFFRNQFASILLLALLTALISVVLGHALSPGSEQLMTLSDGTHLGDTAEMSLQQLVQQMSVEQQRVL
LKASAAGTLAGLVGNVLLAGGLLTMIRQVSNRQPVSVLRAIGLSAPLLPRLLLLIFLTTLLVQLGLLLIIVPGILLAIAF
SLAPVIATSDDLGAIKSMRQSSSLAFANLRLLAPAVLFWLLAKAAVLLLATQFTLVSSLVAVVLLNGLSNLISALLLIYL
YRLYMLLRQA

Sequences:

>Translated_250_residues
MPIMASTLYRDMLNFFRNQFASILLLALLTALISVVLGHALSPGSEQLMTLSDGTHLGDTAEMSLQQLVQQMSVEQQRVL
LKASAAGTLAGLVGNVLLAGGLLTMIRQVSNRQPVSVLRAIGLSAPLLPRLLLLIFLTTLLVQLGLLLIIVPGILLAIAF
SLAPVIATSDDLGAIKSMRQSSSLAFANLRLLAPAVLFWLLAKAAVLLLATQFTLVSSLVAVVLLNGLSNLISALLLIYL
YRLYMLLRQA
>Mature_249_residues
PIMASTLYRDMLNFFRNQFASILLLALLTALISVVLGHALSPGSEQLMTLSDGTHLGDTAEMSLQQLVQQMSVEQQRVLL
KASAAGTLAGLVGNVLLAGGLLTMIRQVSNRQPVSVLRAIGLSAPLLPRLLLLIFLTTLLVQLGLLLIIVPGILLAIAFS
LAPVIATSDDLGAIKSMRQSSSLAFANLRLLAPAVLFWLLAKAAVLLLATQFTLVSSLVAVVLLNGLSNLISALLLIYLY
RLYMLLRQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0259 family

Homologues:

Organism=Escherichia coli, GI1787508, Length=249, Percent_Identity=57.0281124497992, Blast_Score=256, Evalue=1e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1383_SODGM (Q2NT67)

Other databases:

- EMBL:   AP008232
- RefSeq:   YP_455063.1
- STRING:   Q2NT67
- GeneID:   3867258
- GenomeReviews:   AP008232_GR
- KEGG:   sgl:SG1383
- NMPDR:   fig|343509.6.peg.2815
- eggNOG:   NOG45482
- HOGENOM:   HBG391222
- OMA:   YLFRFYM
- PhylomeDB:   Q2NT67
- ProtClustDB:   PRK02868
- BioCyc:   SGLO343509:SG1383-MONOMER
- HAMAP:   MF_01067
- InterPro:   IPR009627

Pfam domain/function: PF06790 UPF0259

EC number: NA

Molecular weight: Translated: 26737; Mature: 26606

Theoretical pI: Translated: 10.79; Mature: 10.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xf51c6e8)-; HASH(0xe4858b8)-; HASH(0xdec3820)-; HASH(0xeadaa74)-; HASH(0xf4bfbd0)-; HASH(0xf597024)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIMASTLYRDMLNFFRNQFASILLLALLTALISVVLGHALSPGSEQLMTLSDGTHLGDT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEECCCCCCCCH
AEMSLQQLVQQMSVEQQRVLLKASAAGTLAGLVGNVLLAGGLLTMIRQVSNRQPVSVLRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
IGLSAPLLPRLLLLIFLTTLLVQLGLLLIIVPGILLAIAFSLAPVIATSDDLGAIKSMRQ
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
SSSLAFANLRLLAPAVLFWLLAKAAVLLLATQFTLVSSLVAVVLLNGLSNLISALLLIYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YRLYMLLRQA
HHHHHHHHCH
>Mature Secondary Structure 
PIMASTLYRDMLNFFRNQFASILLLALLTALISVVLGHALSPGSEQLMTLSDGTHLGDT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEECCCCCCCCH
AEMSLQQLVQQMSVEQQRVLLKASAAGTLAGLVGNVLLAGGLLTMIRQVSNRQPVSVLRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
IGLSAPLLPRLLLLIFLTTLLVQLGLLLIIVPGILLAIAFSLAPVIATSDDLGAIKSMRQ
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
SSSLAFANLRLLAPAVLFWLLAKAAVLLLATQFTLVSSLVAVVLLNGLSNLISALLLIYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YRLYMLLRQA
HHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA