| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is nudG [H]
Identifier: 85059340
GI number: 85059340
Start: 2264156
End: 2264554
Strand: Reverse
Name: nudG [H]
Synonym: SG1362
Alternate gene names: 85059340
Gene position: 2264554-2264156 (Counterclockwise)
Preceding gene: 85059341
Following gene: 85059337
Centisome position: 54.29
GC content: 60.9
Gene sequence:
>399_bases GTGGGCGGATTTCGCTTTGTGAGTACGGCGCAACCGCTCAGTGTGGTAGCAGGGCTTATCCTGCGCGACGGCGCCCTGCT GCTGGCCCGGCGCGGCGACAACCGCGATCAGCCGGGTTTATGGGAGCTCCCCGGCGGAAAAGTCGAGCCGGGGGAAACGC AGCCCCAGGCGCTCAGGCGTGAGCTGTTTGAGAAATTATCCCTCAACGCCCATATTGGCGCATTTGTCGCCAGTCAGCGC CATATTGTCGGGGTGCGAGAAATTGTGCTTTACGGCTGGCGTGTTACAGAATTTAGCGGCGAGCCGCTGTTACACTGTCA TAGTGAATATCTGTGGCTTGCGCCCGCCCGCTTACGATGCCGCTGGCGCCGGTGGATGCCCCACTCATCCAAGCTTTGA
Upstream 100 bases:
>100_bases ATCTGTTGCTGGCCTCGAAGCCGCTGGCGGCAGTTGTCCGGGCGGCCGGCATCGATTACACCATCCGCGCAATGGACAAA CCGTCCGATCACGCACCGGT
Downstream 100 bases:
>100_bases TTGCGCGCCTGTCGACGCGCCATCAACAAGCTCGCGGATTTAGCCGCACCCTACCGCTAGCACTTTTCGGCTGCGCCGCG CTGCTTAAGCGCGCGGGACC
Product: putative pyrophosphohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MGGFRFVSTAQPLSVVAGLILRDGALLLARRGDNRDQPGLWELPGGKVEPGETQPQALRRELFEKLSLNAHIGAFVASQR HIVGVREIVLYGWRVTEFSGEPLLHCHSEYLWLAPARLRCRWRRWMPHSSKL
Sequences:
>Translated_132_residues MGGFRFVSTAQPLSVVAGLILRDGALLLARRGDNRDQPGLWELPGGKVEPGETQPQALRRELFEKLSLNAHIGAFVASQR HIVGVREIVLYGWRVTEFSGEPLLHCHSEYLWLAPARLRCRWRRWMPHSSKL >Mature_131_residues GGFRFVSTAQPLSVVAGLILRDGALLLARRGDNRDQPGLWELPGGKVEPGETQPQALRRELFEKLSLNAHIGAFVASQRH IVGVREIVLYGWRVTEFSGEPLLHCHSEYLWLAPARLRCRWRRWMPHSSKL
Specific function: Specific for pyrimidine substrates. Acts on 5-methyl- dCTP, CTP and dCTP in decreasing order [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 nudix hydrolase domain [H]
Homologues:
Organism=Escherichia coli, GI1788056, Length=103, Percent_Identity=48.5436893203884, Blast_Score=96, Evalue=1e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020476 - InterPro: IPR020084 - InterPro: IPR000086 - InterPro: IPR015797 [H]
Pfam domain/function: PF00293 NUDIX [H]
EC number: 3.6.1.-
Molecular weight: Translated: 14994; Mature: 14862
Theoretical pI: Translated: 10.65; Mature: 10.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGFRFVSTAQPLSVVAGLILRDGALLLARRGDNRDQPGLWELPGGKVEPGETQPQALRR CCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCEEECCCCCCCCCCCCHHHHHH ELFEKLSLNAHIGAFVASQRHIVGVREIVLYGWRVTEFSGEPLLHCHSEYLWLAPARLRC HHHHHHCCCCCHHHHHHCCCCHHHHHHHHHCCCEEECCCCCCEEEECCCEEEECCHHHHH RWRRWMPHSSKL HHHHCCCCCCCC >Mature Secondary Structure GGFRFVSTAQPLSVVAGLILRDGALLLARRGDNRDQPGLWELPGGKVEPGETQPQALRR CCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCEEECCCCCCCCCCCCHHHHHH ELFEKLSLNAHIGAFVASQRHIVGVREIVLYGWRVTEFSGEPLLHCHSEYLWLAPARLRC HHHHHHCCCCCHHHHHHCCCCHHHHHHHHHCCCEEECCCCCCEEEECCCEEEECCHHHHH RWRRWMPHSSKL HHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Fe; Mn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503; 11053429 [H]