| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is yebV [H]
Identifier: 85059291
GI number: 85059291
Start: 2185910
End: 2186155
Strand: Reverse
Name: yebV [H]
Synonym: SG1313
Alternate gene names: 85059291
Gene position: 2186155-2185910 (Counterclockwise)
Preceding gene: 85059299
Following gene: 85059288
Centisome position: 52.41
GC content: 54.07
Gene sequence:
>246_bases ATGACCAAGACGACAGTGCAAATCGGCAGTTTTACCGTTGACGATGCCACCCTTTCCAGCGGCGATGATCAACGGGTCAA GAATATCGTCAGCATCCCCTGTAAATCCGATCCCGATCTGTGCCTGCAGCTGGATGGCTGGGATGAGCAGACCGGCATCC CGGCGTTTCTCGACGGGAAGGAGCACATCTTGTTCCGCCAGCATTACGATCATGACAATGATGCCTGGATCATGCGCCTC GAATAA
Upstream 100 bases:
>100_bases CAGTGTAGAATTTAGCTTTTAGTGCTGTTTGCGCTATACTGCAATAACTCTTTGCCACAGGAGTACGCCATTCTCACCTC ACAGAAAAAGGGGCCTATTT
Downstream 100 bases:
>100_bases TCCCTTCTCCTACCGTCGTCGCGGGAGGCTAATGTGCTCCGCTCGTTCTTCTCTCAACACGATGCCAAGCACCGCGCCGG CGCCTGAAATGGTCTGCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 81; Mature: 80
Protein sequence:
>81_residues MTKTTVQIGSFTVDDATLSSGDDQRVKNIVSIPCKSDPDLCLQLDGWDEQTGIPAFLDGKEHILFRQHYDHDNDAWIMRL E
Sequences:
>Translated_81_residues MTKTTVQIGSFTVDDATLSSGDDQRVKNIVSIPCKSDPDLCLQLDGWDEQTGIPAFLDGKEHILFRQHYDHDNDAWIMRL E >Mature_80_residues TKTTVQIGSFTVDDATLSSGDDQRVKNIVSIPCKSDPDLCLQLDGWDEQTGIPAFLDGKEHILFRQHYDHDNDAWIMRLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081986, Length=81, Percent_Identity=54.320987654321, Blast_Score=94, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009950 - ProDom: PD060427 [H]
Pfam domain/function: PF07351 DUF1480 [H]
EC number: NA
Molecular weight: Translated: 9193; Mature: 9062
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKTTVQIGSFTVDDATLSSGDDQRVKNIVSIPCKSDPDLCLQLDGWDEQTGIPAFLDGK CCCCEEEECCEEECCCCCCCCCCHHCHHEEECCCCCCCCEEEEECCCCCCCCCCEEECCC EHILFRQHYDHDNDAWIMRLE EEEEEEECCCCCCCEEEEEEC >Mature Secondary Structure TKTTVQIGSFTVDDATLSSGDDQRVKNIVSIPCKSDPDLCLQLDGWDEQTGIPAFLDGK CCCEEEECCEEECCCCCCCCCCHHCHHEEECCCCCCCCEEEEECCCCCCCCCCEEECCC EHILFRQHYDHDNDAWIMRLE EEEEEEECCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]