| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85059187
Identifier: 85059187
GI number: 85059187
Start: 2031220
End: 2031726
Strand: Reverse
Name: 85059187
Synonym: SG1209
Alternate gene names: NA
Gene position: 2031726-2031220 (Counterclockwise)
Preceding gene: 85059199
Following gene: 85059186
Centisome position: 48.71
GC content: 53.06
Gene sequence:
>507_bases TTGTCAGGGATTTTTAAATGGGTACGTGACTCACTGGATGCACCTGACAGATTTACCCACTATAGATACATTATTGCCAA ATTCAGTGAAAAACGGGGGGGCGGTATGAACCAGCTCATGACCTACACCTGCCATAGTTCGGCTATGCCCTGCGCGGTGA CTGACAATAACGGCTTGTCATATTTCAATCGCGCGATGCGGAAATTGCTGATTTCGCCTTTATCCCTTGAGCTTTTCCAC TCTCAGGAAGAGAAAGCCCGCGAGAGTTGCCAGCTTTTCTCAGTGCAGAATAAGTGGCCCTTCGGCCCTGAGGAGAAGCT GCAACCTTACCTGTTCGATTTCTACCCGCAATTCGAGTGCATCGGCACCATCTGCCATACGCGCCCGTTTGCGTTCGGCT CAACGCTGGAATGCGTGAATGGGGAAGCGCCGCGCCCGGCGACGTGCCAGCCAGATACCCGCTGGCCGCAAGCACCTGAA TATCTGGTGCAAGGGAGGCAACTTTGA
Upstream 100 bases:
>100_bases ATAAGTGGATTGCTTGCAGCGAGCAAATGCCAAAAGATGGGCTGATGCTTCTTGTAATCGGCAATGGGCATATTGATATT GCATATTTTGATGACGGAGA
Downstream 100 bases:
>100_bases CGTGGTGATTATAAGCGCCGCCTTTGAGCGCCATGGCCTGCCCATCCCCTGGCATTACTGGCGGGTGCGGGATATGCGCA CTCTGCAATGTCTGGCACAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MSGIFKWVRDSLDAPDRFTHYRYIIAKFSEKRGGGMNQLMTYTCHSSAMPCAVTDNNGLSYFNRAMRKLLISPLSLELFH SQEEKARESCQLFSVQNKWPFGPEEKLQPYLFDFYPQFECIGTICHTRPFAFGSTLECVNGEAPRPATCQPDTRWPQAPE YLVQGRQL
Sequences:
>Translated_168_residues MSGIFKWVRDSLDAPDRFTHYRYIIAKFSEKRGGGMNQLMTYTCHSSAMPCAVTDNNGLSYFNRAMRKLLISPLSLELFH SQEEKARESCQLFSVQNKWPFGPEEKLQPYLFDFYPQFECIGTICHTRPFAFGSTLECVNGEAPRPATCQPDTRWPQAPE YLVQGRQL >Mature_167_residues SGIFKWVRDSLDAPDRFTHYRYIIAKFSEKRGGGMNQLMTYTCHSSAMPCAVTDNNGLSYFNRAMRKLLISPLSLELFHS QEEKARESCQLFSVQNKWPFGPEEKLQPYLFDFYPQFECIGTICHTRPFAFGSTLECVNGEAPRPATCQPDTRWPQAPEY LVQGRQL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19361; Mature: 19230
Theoretical pI: Translated: 7.75; Mature: 7.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGIFKWVRDSLDAPDRFTHYRYIIAKFSEKRGGGMNQLMTYTCHSSAMPCAVTDNNGLS CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHEEEHCCCCCCCEEEECCCCHH YFNRAMRKLLISPLSLELFHSQEEKARESCQLFSVQNKWPFGPEEKLQPYLFDFYPQFEC HHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHCCCHHH IGTICHTRPFAFGSTLECVNGEAPRPATCQPDTRWPQAPEYLVQGRQL HHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCC >Mature Secondary Structure SGIFKWVRDSLDAPDRFTHYRYIIAKFSEKRGGGMNQLMTYTCHSSAMPCAVTDNNGLS CHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHEEEHCCCCCCCEEEECCCCHH YFNRAMRKLLISPLSLELFHSQEEKARESCQLFSVQNKWPFGPEEKLQPYLFDFYPQFEC HHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHCCCHHH IGTICHTRPFAFGSTLECVNGEAPRPATCQPDTRWPQAPEYLVQGRQL HHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA