| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85059180
Identifier: 85059180
GI number: 85059180
Start: 2017821
End: 2018624
Strand: Reverse
Name: 85059180
Synonym: SG1202
Alternate gene names: NA
Gene position: 2018624-2017821 (Counterclockwise)
Preceding gene: 85059181
Following gene: 85059179
Centisome position: 48.39
GC content: 61.94
Gene sequence:
>804_bases GTGGCGACCATCGATTTAAGCCAGCTTCCCGCGCCCAACGTCATTGAGTCCCTCGACTTTGAGACGCTGTTTGCCCAACG CAAGGACAGCCTGATAGCCCTTTATCCACCAGAGCAGCGCGAGACGCTGCAGCGTACGCTGCGCTATGAATCCGAGCAGC TGGTTAAGCTGTTGCAGGAAAACACCTACCACGAGCTGTTGCTGCGTCAACGCATCAATGAGGCTGCACAGGCGAACATG CTGGGCTACGCCACCGGCACCGACCTCGATCAGTTGGGCGCCAACTATAACGTCCAACGCCTGGTCATCACACCGGCGGA TGACACCCAACTTCCGCCAACGCCGGCGGTGAAAGAAAGCGATCGGGATTTTCGCCTGCGTATCCAGCAGGCGTTTGAGG GACTGAGCGTCGCTTACCAGTTCCACGGTCGCAGTGCCGATGGCCGCGTCGCGGATATCTCTGTTATCAGTCCGCAGCCC GCCTGCGTGACCGTTTCGGTACTTTCCCGCGAGGGCGACGGCACCGCCAGCGCCGAGTTGATAGCGAAAGTTGCCGCCGC CCTGAATGCCGACACCGTGCGCCCGGTTGCCGACAGGGTGACCGTGCAATCCGCGCGCATCGTACCCTATGAGGTGGAGG AGGCCTCCATCTGTTACCGGGACCGGAAGCTGGCCCCATCCGCCAGGTGGCAGAGCAACGGCTTGACGCCTACGCCCGCG ACCAGCATCGGTTGGGGCGGGATATCCGGTTGTCCGCACTCTATGCCGCCCTGCATGTGGAGGGCGTGCAGCGCGTGGTA TTAA
Upstream 100 bases:
>100_bases TATCCAGCGCGGCCAGCGGAAAAATGACGGTTGACCTGGTGGGACAGCGTACCGATACTGCCGCACCGCTCACCCTGACG CTGCCCTTAGGAGGATAACC
Downstream 100 bases:
>100_bases CACGCCCCGAGGCGGATATCGTGCTGGATGCCACCCAGGCGTCATACTGCCAACGCCATACACTGACCCTGGGAGGCAGC GATGCATAACGGTCGTTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: Baseplate Assembly Protein J; Phage Baseplate Assembly Protein; Baseplate J-Like Protein; Phage-Related Baseplate Assembly Protein; Phage Protein Gp; Phage Baseplate Assembly Protein J; Pyocin R2_PP Baseplate/Tail Fiber Protein; Bacteriophage Baseplate Assembly Protein J; Phage Baseplate J-Like Protein; Bacteriophage P2 Baseplate Assembly Protein GPJ; Prophage LambdaW5 Baseplate Assembly Protein J; Baseplate Assembly Protein GpJ; Baseplate Assembly Protein J Prophage; Baseplate Assembly-Like Protein; Baseplate Assembly Protein; Baseplate Protein Putative Phage Associated Protein; Prophage LambdaW1 Baseplate Assembly Protein J; Phage Baseplate Assembly; Phage Tail Protein; GPJ Of Phage P2-Like; Phage P2 Baseplate Assembly Protein; Phage Tail-Like Protein; Bacteriophage Protein; Phage P2 Baseplate Assembly GpJ-Like Protein; Bacteriophage Baseplate Assembly Protein; Prophage Baseplate Assembly Protein
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MATIDLSQLPAPNVIESLDFETLFAQRKDSLIALYPPEQRETLQRTLRYESEQLVKLLQENTYHELLLRQRINEAAQANM LGYATGTDLDQLGANYNVQRLVITPADDTQLPPTPAVKESDRDFRLRIQQAFEGLSVAYQFHGRSADGRVADISVISPQP ACVTVSVLSREGDGTASAELIAKVAAALNADTVRPVADRVTVQSARIVPYEVEEASICYRDRKLAPSARWQSNGLTPTPA TSIGWGGISGCPHSMPPCMWRACSAWY
Sequences:
>Translated_267_residues MATIDLSQLPAPNVIESLDFETLFAQRKDSLIALYPPEQRETLQRTLRYESEQLVKLLQENTYHELLLRQRINEAAQANM LGYATGTDLDQLGANYNVQRLVITPADDTQLPPTPAVKESDRDFRLRIQQAFEGLSVAYQFHGRSADGRVADISVISPQP ACVTVSVLSREGDGTASAELIAKVAAALNADTVRPVADRVTVQSARIVPYEVEEASICYRDRKLAPSARWQSNGLTPTPA TSIGWGGISGCPHSMPPCMWRACSAWY >Mature_266_residues ATIDLSQLPAPNVIESLDFETLFAQRKDSLIALYPPEQRETLQRTLRYESEQLVKLLQENTYHELLLRQRINEAAQANML GYATGTDLDQLGANYNVQRLVITPADDTQLPPTPAVKESDRDFRLRIQQAFEGLSVAYQFHGRSADGRVADISVISPQPA CVTVSVLSREGDGTASAELIAKVAAALNADTVRPVADRVTVQSARIVPYEVEEASICYRDRKLAPSARWQSNGLTPTPAT SIGWGGISGCPHSMPPCMWRACSAWY
Specific function: Unknown
COG id: COG3948
COG function: function code R; Phage-related baseplate assembly protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29419; Mature: 29287
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATIDLSQLPAPNVIESLDFETLFAQRKDSLIALYPPEQRETLQRTLRYESEQLVKLLQE CCCCCCHHCCCCHHHHHCCHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCHHHHHHHHHH NTYHELLLRQRINEAAQANMLGYATGTDLDQLGANYNVQRLVITPADDTQLPPTPAVKES CHHHHHHHHHHHHHHHHHCEEEEECCCCHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCC DRDFRLRIQQAFEGLSVAYQFHGRSADGRVADISVISPQPACVTVSVLSREGDGTASAEL CCHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCHHHHH IAKVAAALNADTVRPVADRVTVQSARIVPYEVEEASICYRDRKLAPSARWQSNGLTPTPA HHHHHHHHCCCCCCHHHHHHHHCCCEECEEECCHHHHHHHCCCCCCCCCCCCCCCCCCCC TSIGWGGISGCPHSMPPCMWRACSAWY CCCCCCCCCCCCCCCCHHHHHHHHCCC >Mature Secondary Structure ATIDLSQLPAPNVIESLDFETLFAQRKDSLIALYPPEQRETLQRTLRYESEQLVKLLQE CCCCCHHCCCCHHHHHCCHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCHHHHHHHHHH NTYHELLLRQRINEAAQANMLGYATGTDLDQLGANYNVQRLVITPADDTQLPPTPAVKES CHHHHHHHHHHHHHHHHHCEEEEECCCCHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCC DRDFRLRIQQAFEGLSVAYQFHGRSADGRVADISVISPQPACVTVSVLSREGDGTASAEL CCHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCHHHHH IAKVAAALNADTVRPVADRVTVQSARIVPYEVEEASICYRDRKLAPSARWQSNGLTPTPA HHHHHHHHCCCCCCHHHHHHHHCCCEECEEECCHHHHHHHCCCCCCCCCCCCCCCCCCCC TSIGWGGISGCPHSMPPCMWRACSAWY CCCCCCCCCCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA