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The map label for this gene is yqaJ [H]

Identifier: 85059154

GI number: 85059154

Start: 1978377

End: 1979273

Strand: Reverse

Name: yqaJ [H]

Synonym: SG1176

Alternate gene names: 85059154

Gene position: 1979273-1978377 (Counterclockwise)

Preceding gene: 85059155

Following gene: 85059153

Centisome position: 47.45

GC content: 41.14

Gene sequence:

>897_bases
ATGGAAAATGTTGGCCTACTTGACAGACAGAAGTATTTAGGTGGTAGTGACGTAGCAGGAATACTAGGTATTAGTCCATG
GCGTACTGCACTTGATGTTTATCTTGATAAGGTACAACCAAGAAAAGAGGAGATTAGCCTACAAAAACAAAAAATATTCA
CACGCGGCCAACGCATGGAACCATATATTATAGACCTGTTATCTGAAGAGACGGGACTTAAAATAGCCAAGAGAGGCCAT
CGATATCTTGACCCTGAGTTACCCTATATAGCCGCTGAAATCGACGCTGAGGCAGAGAGTGGGGAAAACATCGAGATCAA
GACGGTGAGTCCATTTAAGGCAAGAGATTGGGGAGAGCAACAAACTGATTCCATACCCGTTTATTACACGGCTCAAGCCA
TGCATGGGCTTATGGTAACGGGTAAAAAAGTGTGCGTGTTTGGTGTTCTGATTGGCGGCGATGATTTTCGGGTCTATCGT
GTTGAAAGAGATGATGAAACAATAGCTGCTATTCGTGCTAAAGAGATGGAATTTTGGGAGCGCGTCGTTAATCTTACTCC
GCCACCAATAATCAACGAACATGATGTGAAGCGCTATTTTGACCGTGATGCAGGCTCATCGATTGAAGCGAACGGTAAGA
TGATATCGCTTATAAATGAGCTAAGAATGCTGAAAGTGCGTAAGGATGAAGCTGACAAAGACATTCAAATGATAGAAGAA
CAGATAAAACTAATAATGCAACAGCATTCAATTGTAACCATTGATCAGAGACCGATAATTACATGGAAAACACAATCATC
TACCCGGTTCGACATTTCAGCCTTTAAAAATACTCATCCGGGAATATTTGATAAATTTAAGAAAACAACTCAATCCCGTG
TATTTCGCTTGAAATAA

Upstream 100 bases:

>100_bases
AATTTATGATTGCAGTCTACAACATGGTGGCTCAGGCGGTAAAAAACCAGCGAGCTATTGATATGCTCTATTATCATGAA
ACTTTTGACGAGGTGGCGTA

Downstream 100 bases:

>100_bases
GGAAAAATAATGTCAAACAATACACTCAAAATGGTGGCTACTGGTAAGCCGTCAGAAACTAACAATGAAAAACCTGTAAC
ACTCGCAGCTTTACTGGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MENVGLLDRQKYLGGSDVAGILGISPWRTALDVYLDKVQPRKEEISLQKQKIFTRGQRMEPYIIDLLSEETGLKIAKRGH
RYLDPELPYIAAEIDAEAESGENIEIKTVSPFKARDWGEQQTDSIPVYYTAQAMHGLMVTGKKVCVFGVLIGGDDFRVYR
VERDDETIAAIRAKEMEFWERVVNLTPPPIINEHDVKRYFDRDAGSSIEANGKMISLINELRMLKVRKDEADKDIQMIEE
QIKLIMQQHSIVTIDQRPIITWKTQSSTRFDISAFKNTHPGIFDKFKKTTQSRVFRLK

Sequences:

>Translated_298_residues
MENVGLLDRQKYLGGSDVAGILGISPWRTALDVYLDKVQPRKEEISLQKQKIFTRGQRMEPYIIDLLSEETGLKIAKRGH
RYLDPELPYIAAEIDAEAESGENIEIKTVSPFKARDWGEQQTDSIPVYYTAQAMHGLMVTGKKVCVFGVLIGGDDFRVYR
VERDDETIAAIRAKEMEFWERVVNLTPPPIINEHDVKRYFDRDAGSSIEANGKMISLINELRMLKVRKDEADKDIQMIEE
QIKLIMQQHSIVTIDQRPIITWKTQSSTRFDISAFKNTHPGIFDKFKKTTQSRVFRLK
>Mature_298_residues
MENVGLLDRQKYLGGSDVAGILGISPWRTALDVYLDKVQPRKEEISLQKQKIFTRGQRMEPYIIDLLSEETGLKIAKRGH
RYLDPELPYIAAEIDAEAESGENIEIKTVSPFKARDWGEQQTDSIPVYYTAQAMHGLMVTGKKVCVFGVLIGGDDFRVYR
VERDDETIAAIRAKEMEFWERVVNLTPPPIINEHDVKRYFDRDAGSSIEANGKMISLINELRMLKVRKDEADKDIQMIEE
QIKLIMQQHSIVTIDQRPIITWKTQSSTRFDISAFKNTHPGIFDKFKKTTQSRVFRLK

Specific function: Unknown

COG id: COG5377

COG function: function code L; Phage-related protein, predicted endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011604
- InterPro:   IPR017482
- InterPro:   IPR011335
- InterPro:   IPR019080 [H]

Pfam domain/function: PF09588 YqaJ [H]

EC number: NA

Molecular weight: Translated: 34295; Mature: 34295

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENVGLLDRQKYLGGSDVAGILGISPWRTALDVYLDKVQPRKEEISLQKQKIFTRGQRME
CCCCCCCCHHHHCCCCCCCHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC
PYIIDLLSEETGLKIAKRGHRYLDPELPYIAAEIDAEAESGENIEIKTVSPFKARDWGEQ
CHHHHHHCCCCCCHHHHCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCCC
QTDSIPVYYTAQAMHGLMVTGKKVCVFGVLIGGDDFRVYRVERDDETIAAIRAKEMEFWE
CCCCCCEEEEHHHHCCCCCCCCEEEEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHH
RVVNLTPPPIINEHDVKRYFDRDAGSSIEANGKMISLINELRMLKVRKDEADKDIQMIEE
HHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH
QIKLIMQQHSIVTIDQRPIITWKTQSSTRFDISAFKNTHPGIFDKFKKTTQSRVFRLK
HHHHHHHHCCEEEECCCEEEEEECCCCCEEEHHHHCCCCCCHHHHHHHHHHHHEEECC
>Mature Secondary Structure
MENVGLLDRQKYLGGSDVAGILGISPWRTALDVYLDKVQPRKEEISLQKQKIFTRGQRME
CCCCCCCCHHHHCCCCCCCHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC
PYIIDLLSEETGLKIAKRGHRYLDPELPYIAAEIDAEAESGENIEIKTVSPFKARDWGEQ
CHHHHHHCCCCCCHHHHCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCCC
QTDSIPVYYTAQAMHGLMVTGKKVCVFGVLIGGDDFRVYRVERDDETIAAIRAKEMEFWE
CCCCCCEEEEHHHHCCCCCCCCEEEEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHH
RVVNLTPPPIINEHDVKRYFDRDAGSSIEANGKMISLINELRMLKVRKDEADKDIQMIEE
HHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH
QIKLIMQQHSIVTIDQRPIITWKTQSSTRFDISAFKNTHPGIFDKFKKTTQSRVFRLK
HHHHHHHHCCEEEECCCEEEEEECCCCCEEEHHHHCCCCCCHHHHHHHHHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895 [H]