Click here to switch to the map view.

The map label for this gene is ybjP [H]

Identifier: 85059075

GI number: 85059075

Start: 1817454

End: 1818095

Strand: Reverse

Name: ybjP [H]

Synonym: SG1097

Alternate gene names: 85059075

Gene position: 1818095-1817454 (Counterclockwise)

Preceding gene: 85059076

Following gene: 85059074

Centisome position: 43.59

GC content: 58.1

Gene sequence:

>642_bases
ATGAAAAAGACATCGCTGGTCCTGTTGCCATTAATGTTAACTCTCAGCGCCTGCAGCGCGGTCAAACCGGCCTATGATGA
TGTAGGCAGCCGCAGCGCCCCATGCGTACAGGGCGGCCCCGATAGCGTAGCACAGCAATTCTTTGACCTGCGATTACAAC
CGGGGAATCAGGGAAAACCCGATACCGCTACCCTGGCCCGCTATCGCCCTTATTTCAGTACCGCGCTCTATCATAGTCTG
GCTGAGGATAGCCGCAACGCGCAAAAACTGGCGCGTTTGCCGGTAATGGATATTTTCAGCGGCGATAGCATCGGCCCGAC
AACGGCAGACGTTCATAGCGCCTCCAGGATCCCCAATACCGACGCCAAAAACATTCCACTGCGGGGATATGTCGCGACAG
CAAAACGGCGACAGAGCGAATGTCGACTGGAGGTCGAAGTGCTGATGATACGTGAAGGCACCTGCTGGGTCGTGGACGAC
GTACGCTATCTGGGCGCGGCTCCGCCCGCTACCGCCGGTACTCTGCGCAAACGCTGGAGACACGCTGACCTCACCTTGTG
CCCCGACTCAAAAGCTAGAGGCGCGCTGACGCCGTTTATCTTCCCGAGCGCGATAGCGCTCATGCGCCCGCCTGAAGCAT
AA

Upstream 100 bases:

>100_bases
GCGGTAAAGTGCGCAATAGCACAGCGGGTGCTATAACTCCCTGATAATTCTCTATACTGTATGAGAACAGGCTTCTTACA
CTTCACTTTTAAGGCCGACA

Downstream 100 bases:

>100_bases
CCTGACGCAAAAACCGCCGTTGCTGCTGCTTTGTGCTGTAATTCGTATTATTATCTTCTTAATTGTAAATTTTCTACGCG
GTGGATTGCATCGGCGCTAG

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MKKTSLVLLPLMLTLSACSAVKPAYDDVGSRSAPCVQGGPDSVAQQFFDLRLQPGNQGKPDTATLARYRPYFSTALYHSL
AEDSRNAQKLARLPVMDIFSGDSIGPTTADVHSASRIPNTDAKNIPLRGYVATAKRRQSECRLEVEVLMIREGTCWVVDD
VRYLGAAPPATAGTLRKRWRHADLTLCPDSKARGALTPFIFPSAIALMRPPEA

Sequences:

>Translated_213_residues
MKKTSLVLLPLMLTLSACSAVKPAYDDVGSRSAPCVQGGPDSVAQQFFDLRLQPGNQGKPDTATLARYRPYFSTALYHSL
AEDSRNAQKLARLPVMDIFSGDSIGPTTADVHSASRIPNTDAKNIPLRGYVATAKRRQSECRLEVEVLMIREGTCWVVDD
VRYLGAAPPATAGTLRKRWRHADLTLCPDSKARGALTPFIFPSAIALMRPPEA
>Mature_213_residues
MKKTSLVLLPLMLTLSACSAVKPAYDDVGSRSAPCVQGGPDSVAQQFFDLRLQPGNQGKPDTATLARYRPYFSTALYHSL
AEDSRNAQKLARLPVMDIFSGDSIGPTTADVHSASRIPNTDAKNIPLRGYVATAKRRQSECRLEVEVLMIREGTCWVVDD
VRYLGAAPPATAGTLRKRWRHADLTLCPDSKARGALTPFIFPSAIALMRPPEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787090, Length=172, Percent_Identity=48.8372093023256, Blast_Score=145, Evalue=2e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23200; Mature: 23200

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTSLVLLPLMLTLSACSAVKPAYDDVGSRSAPCVQGGPDSVAQQFFDLRLQPGNQGKP
CCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCHHHHHHHHHHEECCCCCCCCC
DTATLARYRPYFSTALYHSLAEDSRNAQKLARLPVMDIFSGDSIGPTTADVHSASRIPNT
CHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCCCCHHHHHHHCCCCC
DAKNIPLRGYVATAKRRQSECRLEVEVLMIREGTCWVVDDVRYLGAAPPATAGTLRKRWR
CCCCCCCCHHHHHHHHHHHHCCEEEEEEEEECCCEEEEECHHHHCCCCCCCHHHHHHHHC
HADLTLCPDSKARGALTPFIFPSAIALMRPPEA
CCCEEECCCCCCCCCCCCHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKKTSLVLLPLMLTLSACSAVKPAYDDVGSRSAPCVQGGPDSVAQQFFDLRLQPGNQGKP
CCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCHHHHHHHHHHEECCCCCCCCC
DTATLARYRPYFSTALYHSLAEDSRNAQKLARLPVMDIFSGDSIGPTTADVHSASRIPNT
CHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCCCCHHHHHHHCCCCC
DAKNIPLRGYVATAKRRQSECRLEVEVLMIREGTCWVVDDVRYLGAAPPATAGTLRKRWR
CCCCCCCCHHHHHHHHHHHHCCEEEEEEEEECCCEEEEECHHHHCCCCCCCHHHHHHHHC
HADLTLCPDSKARGALTPFIFPSAIALMRPPEA
CCCEEECCCCCCCCCCCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 10806384 [H]