| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85059070
Identifier: 85059070
GI number: 85059070
Start: 1813205
End: 1813984
Strand: Reverse
Name: 85059070
Synonym: SG1092
Alternate gene names: NA
Gene position: 1813984-1813205 (Counterclockwise)
Preceding gene: 85059071
Following gene: 85059066
Centisome position: 43.49
GC content: 52.18
Gene sequence:
>780_bases ATGACCACACTATCTATTGTTCCATTCACTTTTGAAAAGCATGAAGTACGCACAACTATTTTAAACGGCGAACCGTGGTT TGTTGGCATTGACGTGTGTTCCGCGCTCGGAATAAGTAACAATAGAGATGCCTTAAGCAAGTTGGACGACGACGAAAAGA CGACCGTCGCTTTAACCGACAGTCAGCCAGGGACTGGGGCTCAACGTATTTCTTTGATATCCGAACCCAGCATGTTTACC TTGGTATTACGCTGCCGCGATGCAGTGAAGCAAGGCACCCTGCCCCATCGCTTTCGCAAATGGGTGACGAGTGAAATCCT TCCTTCAATCCGCAAGACTGGCAAATACGAGCACCCCGTTTACAAGCCAGAGTCCCACGAACTCTTCACCACTAACGATA CCTCCAACCTCGCCCGCCTGATTTGGCACATGAGCCATAACTTCCGCTTCAAGCAGGCATGGAGCAATGGCATATGGTAC GCCCTGCGCGAAGTCACCGGCATTCCCTCACCGCAGCCGATGGAAGTCCGCCACATCCCGCATATTGCCAGAGAATGCGA ACGTATATGGGCTGTGATTGAACGTCTGCAATCTGCTATGGTGGAAGCCGAAAGGCGAACCATTCGTCAACTGGTGCGCA AGCGGGAGAATGTGGATAGCGTGATGAGTGAAATCGATAGCTTGCTTGCTGAAGCCAGTCAGAGCAACGCCTTCATGCTC ACCGATACCCTGACCCGTTGGCATAAGTCCGAGCTCGGCCAGTTCGCGCAGAGGCACTGA
Upstream 100 bases:
>100_bases CCGGTTGGTTACTCCGGTACGCGAACTCCGTCCAGCTCGCCACCCTCTAGATTCGCGTCTTACGGTGGTGATAACTTCAA GTAACCATTTGGAGGTCATC
Downstream 100 bases:
>100_bases CAGCCGCCCCAGCTCGTTGAGGGACCGGTGGTCATTTGATGGCATGAAGGATAGCCGCCATCAGGTAGCCTGTGGAGGCG GTGAACAGCACCAACCACAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MTTLSIVPFTFEKHEVRTTILNGEPWFVGIDVCSALGISNNRDALSKLDDDEKTTVALTDSQPGTGAQRISLISEPSMFT LVLRCRDAVKQGTLPHRFRKWVTSEILPSIRKTGKYEHPVYKPESHELFTTNDTSNLARLIWHMSHNFRFKQAWSNGIWY ALREVTGIPSPQPMEVRHIPHIARECERIWAVIERLQSAMVEAERRTIRQLVRKRENVDSVMSEIDSLLAEASQSNAFML TDTLTRWHKSELGQFAQRH
Sequences:
>Translated_259_residues MTTLSIVPFTFEKHEVRTTILNGEPWFVGIDVCSALGISNNRDALSKLDDDEKTTVALTDSQPGTGAQRISLISEPSMFT LVLRCRDAVKQGTLPHRFRKWVTSEILPSIRKTGKYEHPVYKPESHELFTTNDTSNLARLIWHMSHNFRFKQAWSNGIWY ALREVTGIPSPQPMEVRHIPHIARECERIWAVIERLQSAMVEAERRTIRQLVRKRENVDSVMSEIDSLLAEASQSNAFML TDTLTRWHKSELGQFAQRH >Mature_258_residues TTLSIVPFTFEKHEVRTTILNGEPWFVGIDVCSALGISNNRDALSKLDDDEKTTVALTDSQPGTGAQRISLISEPSMFTL VLRCRDAVKQGTLPHRFRKWVTSEILPSIRKTGKYEHPVYKPESHELFTTNDTSNLARLIWHMSHNFRFKQAWSNGIWYA LREVTGIPSPQPMEVRHIPHIARECERIWAVIERLQSAMVEAERRTIRQLVRKRENVDSVMSEIDSLLAEASQSNAFMLT DTLTRWHKSELGQFAQRH
Specific function: Unknown
COG id: COG3617
COG function: function code K; Prophage antirepressor
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Bro-N domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003497 - InterPro: IPR018876 [H]
Pfam domain/function: PF02498 Bro-N; PF10548 P22_AR_C [H]
EC number: NA
Molecular weight: Translated: 29796; Mature: 29665
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: PS00436 PEROXIDASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLSIVPFTFEKHEVRTTILNGEPWFVGIDVCSALGISNNRDALSKLDDDEKTTVALTD CCCEEEEEEECCCHHEEEEEECCCCCEEHHHHHHHHCCCCCHHHHHHCCCCCCEEEEEEC SQPGTGAQRISLISEPSMFTLVLRCRDAVKQGTLPHRFRKWVTSEILPSIRKTGKYEHPV CCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC YKPESHELFTTNDTSNLARLIWHMSHNFRFKQAWSNGIWYALREVTGIPSPQPMEVRHIP CCCCCCCEEECCCHHHHHHHHHHHHCCCEEHHHHCCCHHHHHHHHCCCCCCCCCCHHHHH HIARECERIWAVIERLQSAMVEAERRTIRQLVRKRENVDSVMSEIDSLLAEASQSNAFML HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE TDTLTRWHKSELGQFAQRH HHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TTLSIVPFTFEKHEVRTTILNGEPWFVGIDVCSALGISNNRDALSKLDDDEKTTVALTD CCEEEEEEECCCHHEEEEEECCCCCEEHHHHHHHHCCCCCHHHHHHCCCCCCEEEEEEC SQPGTGAQRISLISEPSMFTLVLRCRDAVKQGTLPHRFRKWVTSEILPSIRKTGKYEHPV CCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC YKPESHELFTTNDTSNLARLIWHMSHNFRFKQAWSNGIWYALREVTGIPSPQPMEVRHIP CCCCCCCEEECCCHHHHHHHHHHHHCCCEEHHHHCCCHHHHHHHHCCCCCCCCCCHHHHH HIARECERIWAVIERLQSAMVEAERRTIRQLVRKRENVDSVMSEIDSLLAEASQSNAFML HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE TDTLTRWHKSELGQFAQRH HHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]