| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is yceF [C]
Identifier: 85059032
GI number: 85059032
Start: 1758809
End: 1759393
Strand: Reverse
Name: yceF [C]
Synonym: SG1054
Alternate gene names: 85059032
Gene position: 1759393-1758809 (Counterclockwise)
Preceding gene: 85059053
Following gene: 85059030
Centisome position: 42.18
GC content: 61.54
Gene sequence:
>585_bases ATGCATAAAATCGTTCTGGCCTCTTCTTCCCCTTACCGCCGCGCGCTGTTGGAGAAATTAAGAATACCGTTTGAATTTCA CGCCCCGGATATCGATGAAACGCCGCACGCCGGCGAAGAGGCGGCGCCAATGGTGCAGCGCCTGGCCATCGCGAAAGCGC AGGCGCTGGCCGAGCGTTATCCCCGGCACCTGATCATCGGTGCCGATCAATGCTGCGTGCTGGATGGCCAGATCGCGGGG AAGCCGCTCACGGAAGCCAACGCCATTGCACAGCTGACCAGCGCCCACGGCAAAGCCGTGACGTTCTATACCGGCCTGGC GCTGCTCAATAGCGCCAGCGGTGCTTTGCAGGCCTGTACGGAACCCTTTGTCGTTCGTTTCCGCGCGCTGGAGGACGCTG AAATCGCCGGCTATGTGCATTTGGAACAGCCCTTGCAATGTGCGGGCAGTTTTCAATGCGAAGGACTGGGGATCGCGCTC TTCGAGGCGCTTGAGGGCCGGGACCCCAACACGCTGATCGGGTTACCGCTGCTGGCGCTCGCCGACATGCTGCGCCGGGA GGGGGTAAATCCTCTACGCCGGTAA
Upstream 100 bases:
>100_bases AGTCAAAGAAAAAGGGTGTTTTTCACCCATATTCGCCATCTTGACGCTGGACAGTTTAGAATGCGGCGATGAATTTGACC ATCCTGCGGATAATAAAGTG
Downstream 100 bases:
>100_bases CCGCTAACAGCCGGCACGCCTATTTGTGGTTATCGCGCAAATACAACAGGCACTGGCGCAACGACGCATCCAGCGGCGCG TCTATCCGCAACGTTTCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MHKIVLASSSPYRRALLEKLRIPFEFHAPDIDETPHAGEEAAPMVQRLAIAKAQALAERYPRHLIIGADQCCVLDGQIAG KPLTEANAIAQLTSAHGKAVTFYTGLALLNSASGALQACTEPFVVRFRALEDAEIAGYVHLEQPLQCAGSFQCEGLGIAL FEALEGRDPNTLIGLPLLALADMLRREGVNPLRR
Sequences:
>Translated_194_residues MHKIVLASSSPYRRALLEKLRIPFEFHAPDIDETPHAGEEAAPMVQRLAIAKAQALAERYPRHLIIGADQCCVLDGQIAG KPLTEANAIAQLTSAHGKAVTFYTGLALLNSASGALQACTEPFVVRFRALEDAEIAGYVHLEQPLQCAGSFQCEGLGIAL FEALEGRDPNTLIGLPLLALADMLRREGVNPLRR >Mature_194_residues MHKIVLASSSPYRRALLEKLRIPFEFHAPDIDETPHAGEEAAPMVQRLAIAKAQALAERYPRHLIIGADQCCVLDGQIAG KPLTEANAIAQLTSAHGKAVTFYTGLALLNSASGALQACTEPFVVRFRALEDAEIAGYVHLEQPLQCAGSFQCEGLGIAL FEALEGRDPNTLIGLPLLALADMLRREGVNPLRR
Specific function: Unknown
COG id: COG0424
COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the maf family
Homologues:
Organism=Homo sapiens, GI117553627, Length=192, Percent_Identity=30.7291666666667, Blast_Score=71, Evalue=5e-13, Organism=Escherichia coli, GI87081830, Length=192, Percent_Identity=66.6666666666667, Blast_Score=256, Evalue=7e-70, Organism=Escherichia coli, GI1789646, Length=194, Percent_Identity=33.5051546391753, Blast_Score=88, Evalue=4e-19, Organism=Drosophila melanogaster, GI78706856, Length=184, Percent_Identity=30.4347826086957, Blast_Score=66, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1054_SODGM (Q2NU46)
Other databases:
- EMBL: AP008232 - RefSeq: YP_454734.1 - ProteinModelPortal: Q2NU46 - SMR: Q2NU46 - STRING: Q2NU46 - GeneID: 3866966 - GenomeReviews: AP008232_GR - KEGG: sgl:SG1054 - NMPDR: fig|343509.6.peg.2187 - eggNOG: COG0424 - HOGENOM: HBG414045 - OMA: CAGSFKA - PhylomeDB: Q2NU46 - BioCyc: SGLO343509:SG1054-MONOMER - GO: GO:0005737 - HAMAP: MF_00528 - InterPro: IPR003697 - PIRSF: PIRSF006305 - TIGRFAMs: TIGR00172
Pfam domain/function: PF02545 Maf
EC number: NA
Molecular weight: Translated: 20963; Mature: 20963
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: ACT_SITE 33-33
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKIVLASSSPYRRALLEKLRIPFEFHAPDIDETPHAGEEAAPMVQRLAIAKAQALAERY CCEEEECCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC PRHLIIGADQCCVLDGQIAGKPLTEANAIAQLTSAHGKAVTFYTGLALLNSASGALQACT CCEEEEECCCEEEECCCCCCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHHCCCHHHHHHC EPFVVRFRALEDAEIAGYVHLEQPLQCAGSFQCEGLGIALFEALEGRDPNTLIGLPLLAL HHHHHHHHHCCCCCCEEEEEECCHHHHCCCCCCCCCHHHHHHHHCCCCCCEEEHHHHHHH ADMLRREGVNPLRR HHHHHHCCCCCCCC >Mature Secondary Structure MHKIVLASSSPYRRALLEKLRIPFEFHAPDIDETPHAGEEAAPMVQRLAIAKAQALAERY CCEEEECCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC PRHLIIGADQCCVLDGQIAGKPLTEANAIAQLTSAHGKAVTFYTGLALLNSASGALQACT CCEEEEECCCEEEECCCCCCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHHCCCHHHHHHC EPFVVRFRALEDAEIAGYVHLEQPLQCAGSFQCEGLGIALFEALEGRDPNTLIGLPLLAL HHHHHHHHHCCCCCCEEEEEECCHHHHCCCCCCCCCHHHHHHHHCCCCCCEEEHHHHHHH ADMLRREGVNPLRR HHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA