| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85058939
Identifier: 85058939
GI number: 85058939
Start: 1584252
End: 1584770
Strand: Reverse
Name: 85058939
Synonym: SG0961
Alternate gene names: NA
Gene position: 1584770-1584252 (Counterclockwise)
Preceding gene: 85058944
Following gene: 85058934
Centisome position: 37.99
GC content: 43.55
Gene sequence:
>519_bases ATGAAAATATTCGCTATTTGCATGGTGAAAGATGAAATCGACGTATTGGAAAAAGCGCTGGAAGCGGCTTTGCCCTGGAT CGATAAGATTTTTTTGATTGATCATGCCAGTACGGATGGAACGTGGGAACTTATCGATCAGAAATTTCACCATTGGGATA AAGTGGAAGTTTACGGCCAGATTACGGATGAATTTACCGACGGATTTCGCTCACGTGCCTACAATAAATTCCGTCAGCAG GCACAGGAAGGCGACTGGTGGTGTCGGTTAGACTTTGATGAATTCTATATTGATAATCCGCGTGAATTTTTAGCCAAGGT CGGCAAGCATTACGATATTGTGCAATGTGCGAGCTTTCAATATTACTTTACCGAGAAGGATGCAGAAGAATACCAGCGTC ACCCGGAGCGTTATCGAGATGGTGAATCGATAAATGCCTTAAAATTCTTTGCCTGTAACAGTTCTGAGGCGCGTTTTGTT AAACACAGAAATCGCGAGTGGAAAGAGGACAGCCTCTAG
Upstream 100 bases:
>100_bases TATAATGAATGTCATGACTGCAACTCATTGATTTTAATTTTGAAACGGACTTAGTGCTGATAAATTTACTTAGTGGTCCG GCCAACGGGTGTAGATAAAA
Downstream 100 bases:
>100_bases CCGGTCGGCAGATTCCCTAATCTGATCTGGCCTCATCATATCCGTTTAAAACATTTTCAATACCGCTATCCCGAGAAAAT TCAGCATCGTTTGGACTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MKIFAICMVKDEIDVLEKALEAALPWIDKIFLIDHASTDGTWELIDQKFHHWDKVEVYGQITDEFTDGFRSRAYNKFRQQ AQEGDWWCRLDFDEFYIDNPREFLAKVGKHYDIVQCASFQYYFTEKDAEEYQRHPERYRDGESINALKFFACNSSEARFV KHRNREWKEDSL
Sequences:
>Translated_172_residues MKIFAICMVKDEIDVLEKALEAALPWIDKIFLIDHASTDGTWELIDQKFHHWDKVEVYGQITDEFTDGFRSRAYNKFRQQ AQEGDWWCRLDFDEFYIDNPREFLAKVGKHYDIVQCASFQYYFTEKDAEEYQRHPERYRDGESINALKFFACNSSEARFV KHRNREWKEDSL >Mature_172_residues MKIFAICMVKDEIDVLEKALEAALPWIDKIFLIDHASTDGTWELIDQKFHHWDKVEVYGQITDEFTDGFRSRAYNKFRQQ AQEGDWWCRLDFDEFYIDNPREFLAKVGKHYDIVQCASFQYYFTEKDAEEYQRHPERYRDGESINALKFFACNSSEARFV KHRNREWKEDSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20760; Mature: 20760
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIFAICMVKDEIDVLEKALEAALPWIDKIFLIDHASTDGTWELIDQKFHHWDKVEVYGQ CEEEEEEEEHHHHHHHHHHHHHHCCHHHEEEEEECCCCCCHHHHHHHHHCCCCHHHEEEE ITDEFTDGFRSRAYNKFRQQAQEGDWWCRLDFDEFYIDNPREFLAKVGKHYDIVQCASFQ HHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHCCCCHHHHHHHHCCCCCEEECCCEE YYFTEKDAEEYQRHPERYRDGESINALKFFACNSSEARFVKHRNREWKEDSL EEECCCCHHHHHHCHHHHCCCCCCCEEEEEEECCCCHHHHHHCCCCCCCCCC >Mature Secondary Structure MKIFAICMVKDEIDVLEKALEAALPWIDKIFLIDHASTDGTWELIDQKFHHWDKVEVYGQ CEEEEEEEEHHHHHHHHHHHHHHCCHHHEEEEEECCCCCCHHHHHHHHHCCCCHHHEEEE ITDEFTDGFRSRAYNKFRQQAQEGDWWCRLDFDEFYIDNPREFLAKVGKHYDIVQCASFQ HHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHCCCCHHHHHHHHCCCCCEEECCCEE YYFTEKDAEEYQRHPERYRDGESINALKFFACNSSEARFVKHRNREWKEDSL EEECCCCHHHHHHCHHHHCCCCCCCEEEEEEECCCCHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA