| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is yhgA [C]
Identifier: 85058924
GI number: 85058924
Start: 1549376
End: 1549906
Strand: Reverse
Name: yhgA [C]
Synonym: SG0946
Alternate gene names: 85058924
Gene position: 1549906-1549376 (Counterclockwise)
Preceding gene: 85058926
Following gene: 85058923
Centisome position: 37.16
GC content: 56.5
Gene sequence:
>531_bases ATGACAAAATCCTCACTATCCCAACACGACGCCCTGTTCAAAAAGTGCCTCGGCGATATCGCTGTCGCCCGGGACTTTCT AGAAATCCATCTGCAGCCGCACCTGCGCAAACGCTGCGATTTCTGCACACTGGCGATGGCCTCCGCCGGCTCGTTTATCG AAGACGATCTCAAGGGCCAATGCTCTGATATGCTCTACTCGATGAAGACCACGACGGGCCATGATGGCTACGTCTACTGT CTTGTCGAGCACCAGAGCCGCCCGGAAAAGCTGATGGCGTTTCGGTTGCTACGGTACGCGGTCGCCGCAATACAGCGGCA CCTTGAGCAAGGCAATGACGCTTTGCCTGTGGTCATTCCGCTCCTGTTCTACCACGGCACCACGTCGCCCTATCCGTACA GCACCCAATGGCTGGATTGCTTTGCTGACCCTGAACTGGCAGAATCAGTCTACAGGCAAGCATTCCCGCTGGTCGATATC ACCGCGATGCCAGATGATGAAATACTGTCCCATCGGCGGGAGCGCTGCTAG
Upstream 100 bases:
>100_bases TGGCGACATCGTCCGGGCGGCGCGGATTGGCCAGACGAATATGTGCATCCAGCGGTATGATGGCACCTTGGGGGGGGATC CCGCTGAAGGTACTGCGCCA
Downstream 100 bases:
>100_bases AGTTAGTGCAAAAGCACATCCGAACGCGGGATATGTTAGAACTGGCTTCTGATATCGCCCGGTTGCTCAATCTATGGGCA ATACCGAAAGAACAGTTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MTKSSLSQHDALFKKCLGDIAVARDFLEIHLQPHLRKRCDFCTLAMASAGSFIEDDLKGQCSDMLYSMKTTTGHDGYVYC LVEHQSRPEKLMAFRLLRYAVAAIQRHLEQGNDALPVVIPLLFYHGTTSPYPYSTQWLDCFADPELAESVYRQAFPLVDI TAMPDDEILSHRRERC
Sequences:
>Translated_176_residues MTKSSLSQHDALFKKCLGDIAVARDFLEIHLQPHLRKRCDFCTLAMASAGSFIEDDLKGQCSDMLYSMKTTTGHDGYVYC LVEHQSRPEKLMAFRLLRYAVAAIQRHLEQGNDALPVVIPLLFYHGTTSPYPYSTQWLDCFADPELAESVYRQAFPLVDI TAMPDDEILSHRRERC >Mature_175_residues TKSSLSQHDALFKKCLGDIAVARDFLEIHLQPHLRKRCDFCTLAMASAGSFIEDDLKGQCSDMLYSMKTTTGHDGYVYCL VEHQSRPEKLMAFRLLRYAVAAIQRHLEQGNDALPVVIPLLFYHGTTSPYPYSTQWLDCFADPELAESVYRQAFPLVDIT AMPDDEILSHRRERC
Specific function: Unknown
COG id: COG5464
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the yadD/yfaD/yhgA/yjiP family [H]
Homologues:
Organism=Escherichia coli, GI1789816, Length=171, Percent_Identity=57.8947368421053, Blast_Score=204, Evalue=4e-54, Organism=Escherichia coli, GI1788577, Length=174, Percent_Identity=58.0459770114943, Blast_Score=202, Evalue=1e-53, Organism=Escherichia coli, GI1788643, Length=174, Percent_Identity=55.1724137931034, Blast_Score=197, Evalue=3e-52, Organism=Escherichia coli, GI1786324, Length=173, Percent_Identity=54.3352601156069, Blast_Score=196, Evalue=5e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010106 - InterPro: IPR006842 [H]
Pfam domain/function: PF04754 Transposase_31 [H]
EC number: NA
Molecular weight: Translated: 20077; Mature: 19946
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKSSLSQHDALFKKCLGDIAVARDFLEIHLQPHLRKRCDFCTLAMASAGSFIEDDLKGQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHCCCHHHHHHHHH CSDMLYSMKTTTGHDGYVYCLVEHQSRPEKLMAFRLLRYAVAAIQRHLEQGNDALPVVIP HHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH LLFYHGTTSPYPYSTQWLDCFADPELAESVYRQAFPLVDITAMPDDEILSHRRERC HHHHCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHCC >Mature Secondary Structure TKSSLSQHDALFKKCLGDIAVARDFLEIHLQPHLRKRCDFCTLAMASAGSFIEDDLKGQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHCCCHHHHHHHHH CSDMLYSMKTTTGHDGYVYCLVEHQSRPEKLMAFRLLRYAVAAIQRHLEQGNDALPVVIP HHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH LLFYHGTTSPYPYSTQWLDCFADPELAESVYRQAFPLVDITAMPDDEILSHRRERC HHHHCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677609 [H]