Definition Sodalis glossinidius str. 'morsitans', complete genome.
Accession NC_007712
Length 4,171,146

Click here to switch to the map view.

The map label for this gene is yhgA [C]

Identifier: 85058924

GI number: 85058924

Start: 1549376

End: 1549906

Strand: Reverse

Name: yhgA [C]

Synonym: SG0946

Alternate gene names: 85058924

Gene position: 1549906-1549376 (Counterclockwise)

Preceding gene: 85058926

Following gene: 85058923

Centisome position: 37.16

GC content: 56.5

Gene sequence:

>531_bases
ATGACAAAATCCTCACTATCCCAACACGACGCCCTGTTCAAAAAGTGCCTCGGCGATATCGCTGTCGCCCGGGACTTTCT
AGAAATCCATCTGCAGCCGCACCTGCGCAAACGCTGCGATTTCTGCACACTGGCGATGGCCTCCGCCGGCTCGTTTATCG
AAGACGATCTCAAGGGCCAATGCTCTGATATGCTCTACTCGATGAAGACCACGACGGGCCATGATGGCTACGTCTACTGT
CTTGTCGAGCACCAGAGCCGCCCGGAAAAGCTGATGGCGTTTCGGTTGCTACGGTACGCGGTCGCCGCAATACAGCGGCA
CCTTGAGCAAGGCAATGACGCTTTGCCTGTGGTCATTCCGCTCCTGTTCTACCACGGCACCACGTCGCCCTATCCGTACA
GCACCCAATGGCTGGATTGCTTTGCTGACCCTGAACTGGCAGAATCAGTCTACAGGCAAGCATTCCCGCTGGTCGATATC
ACCGCGATGCCAGATGATGAAATACTGTCCCATCGGCGGGAGCGCTGCTAG

Upstream 100 bases:

>100_bases
TGGCGACATCGTCCGGGCGGCGCGGATTGGCCAGACGAATATGTGCATCCAGCGGTATGATGGCACCTTGGGGGGGGATC
CCGCTGAAGGTACTGCGCCA

Downstream 100 bases:

>100_bases
AGTTAGTGCAAAAGCACATCCGAACGCGGGATATGTTAGAACTGGCTTCTGATATCGCCCGGTTGCTCAATCTATGGGCA
ATACCGAAAGAACAGTTCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MTKSSLSQHDALFKKCLGDIAVARDFLEIHLQPHLRKRCDFCTLAMASAGSFIEDDLKGQCSDMLYSMKTTTGHDGYVYC
LVEHQSRPEKLMAFRLLRYAVAAIQRHLEQGNDALPVVIPLLFYHGTTSPYPYSTQWLDCFADPELAESVYRQAFPLVDI
TAMPDDEILSHRRERC

Sequences:

>Translated_176_residues
MTKSSLSQHDALFKKCLGDIAVARDFLEIHLQPHLRKRCDFCTLAMASAGSFIEDDLKGQCSDMLYSMKTTTGHDGYVYC
LVEHQSRPEKLMAFRLLRYAVAAIQRHLEQGNDALPVVIPLLFYHGTTSPYPYSTQWLDCFADPELAESVYRQAFPLVDI
TAMPDDEILSHRRERC
>Mature_175_residues
TKSSLSQHDALFKKCLGDIAVARDFLEIHLQPHLRKRCDFCTLAMASAGSFIEDDLKGQCSDMLYSMKTTTGHDGYVYCL
VEHQSRPEKLMAFRLLRYAVAAIQRHLEQGNDALPVVIPLLFYHGTTSPYPYSTQWLDCFADPELAESVYRQAFPLVDIT
AMPDDEILSHRRERC

Specific function: Unknown

COG id: COG5464

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yadD/yfaD/yhgA/yjiP family [H]

Homologues:

Organism=Escherichia coli, GI1789816, Length=171, Percent_Identity=57.8947368421053, Blast_Score=204, Evalue=4e-54,
Organism=Escherichia coli, GI1788577, Length=174, Percent_Identity=58.0459770114943, Blast_Score=202, Evalue=1e-53,
Organism=Escherichia coli, GI1788643, Length=174, Percent_Identity=55.1724137931034, Blast_Score=197, Evalue=3e-52,
Organism=Escherichia coli, GI1786324, Length=173, Percent_Identity=54.3352601156069, Blast_Score=196, Evalue=5e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010106
- InterPro:   IPR006842 [H]

Pfam domain/function: PF04754 Transposase_31 [H]

EC number: NA

Molecular weight: Translated: 20077; Mature: 19946

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKSSLSQHDALFKKCLGDIAVARDFLEIHLQPHLRKRCDFCTLAMASAGSFIEDDLKGQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHCCCHHHHHHHHH
CSDMLYSMKTTTGHDGYVYCLVEHQSRPEKLMAFRLLRYAVAAIQRHLEQGNDALPVVIP
HHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
LLFYHGTTSPYPYSTQWLDCFADPELAESVYRQAFPLVDITAMPDDEILSHRRERC
HHHHCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHCC
>Mature Secondary Structure 
TKSSLSQHDALFKKCLGDIAVARDFLEIHLQPHLRKRCDFCTLAMASAGSFIEDDLKGQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHCCCHHHHHHHHH
CSDMLYSMKTTTGHDGYVYCLVEHQSRPEKLMAFRLLRYAVAAIQRHLEQGNDALPVVIP
HHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
LLFYHGTTSPYPYSTQWLDCFADPELAESVYRQAFPLVDITAMPDDEILSHRRERC
HHHHCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677609 [H]