| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85058913
Identifier: 85058913
GI number: 85058913
Start: 1528945
End: 1530060
Strand: Reverse
Name: 85058913
Synonym: SG0935
Alternate gene names: NA
Gene position: 1530060-1528945 (Counterclockwise)
Preceding gene: 85058914
Following gene: 85058911
Centisome position: 36.68
GC content: 36.74
Gene sequence:
>1116_bases TTGAGCGACCTAATGTCCATTTTCGGTACCCCTACAATGGCAAATGCTCAATACGAAAAAGGTAAAATTAGGCTTGATTT TTCAAAAAACCAAATAAAGAAAGCAGGAGAATCTATAAGAAAGGAAGGAGTAACAAATGAAAAAGTTCAATTGATTCAAA ATTATAGGGCGGCCCATCTTTACCCCTTAATGATAATAAAAAATTTAGTCTGGAAACACATTCAAAAAATAGCGCCCAAC GCTATTATCGCCAGAAGATTAAAGCGCCTCCCAACTATTATAGACAAGTTAACCAGAGATACCTTAGATGGCATCAACAA AAACACTATGTGTGTTACTCGGATGCAAGATATAGGAGGATGTCGAGTAATCGTTGATAACAAAGAGCAGTCATTGCGGG TCAACTCTTCGCTTGAGCAAAGTAGAACCTTGTACATAACCAAGTTGTCAAGAGATTATAACATAAATCCTAAGAAAACC GGCTACCGGGGGATACATAGGGTTTATCAATGTTATGGGAAAAGGAAGGAGCATGATTGGAAGGGATTTACTATTGAACT ACAACTCCGAACTCGATTACAACACCTATGGGCTACAACAGTCGAAGTCGTCGACCTCTGCGAAGGAAAAACCTTAAAAA CAAACCCCTATGATGCTGACCCGAGATGGATAGCTTTTTTCCGTGAAATGAGCGATTTTCTGGCTGATGAGGATGGATTT ATTTCGTTATCTAACGAACAGAAAAAGCAGTCTCTTATTGCGCTAAATGAAGCACTTAATGCCCAAAAAAAGCTTGAATC TTTTAACTTAATCTTTTCGGGCAGAAAAATATCCCACGATAAAAATAAGTACCGGTATGCAATTATAGGGATATGCTTAT CAGATAAGACAACACACGTTAACTTCTTTGGGGAAAGAAAAAAACATGATGCCATTAGACTGTATTCAGAAATAGAAAAA AATGACCTATGGAATGGTCTATTCGTAGAAATGAGTGATATTTGGCAGTTACAGTATGCATACCCAAATTATTTAATTGA CACTCATCAATTTGTTGAAAAATTAAAATCCTATACAGAGTCAAGTTATTGGACTCAGCCTTTAAGATTTCGTTAA
Upstream 100 bases:
>100_bases GGCGGGGTATCGGAGATGTGAAAATGTCACAGCCTGGTAACTACTGCGTTACAAAGCAGGGACAGTGATGACTTGAGCAG ACAACGTCGAGGAGTTTATA
Downstream 100 bases:
>100_bases TCTCGCTGTAGGGGTACACCGGGATCCTCGCCGCCTGAGAGAGTCACCAAAGCAGGCACTTAACACGGAGACCACCATGC AAAAGCTCATTGACGAATTC
Product: hypothetical protein
Products: NA
Alternate protein names: RelA/SpoT Domain-Containing Protein; Conserved Domain Protein; Stringent Response Modulating PpGpp Metabolism Protein; RelA/SpoT; GTP Pyrophosphokinase; Rela/Spot Domain Protein
Number of amino acids: Translated: 371; Mature: 370
Protein sequence:
>371_residues MSDLMSIFGTPTMANAQYEKGKIRLDFSKNQIKKAGESIRKEGVTNEKVQLIQNYRAAHLYPLMIIKNLVWKHIQKIAPN AIIARRLKRLPTIIDKLTRDTLDGINKNTMCVTRMQDIGGCRVIVDNKEQSLRVNSSLEQSRTLYITKLSRDYNINPKKT GYRGIHRVYQCYGKRKEHDWKGFTIELQLRTRLQHLWATTVEVVDLCEGKTLKTNPYDADPRWIAFFREMSDFLADEDGF ISLSNEQKKQSLIALNEALNAQKKLESFNLIFSGRKISHDKNKYRYAIIGICLSDKTTHVNFFGERKKHDAIRLYSEIEK NDLWNGLFVEMSDIWQLQYAYPNYLIDTHQFVEKLKSYTESSYWTQPLRFR
Sequences:
>Translated_371_residues MSDLMSIFGTPTMANAQYEKGKIRLDFSKNQIKKAGESIRKEGVTNEKVQLIQNYRAAHLYPLMIIKNLVWKHIQKIAPN AIIARRLKRLPTIIDKLTRDTLDGINKNTMCVTRMQDIGGCRVIVDNKEQSLRVNSSLEQSRTLYITKLSRDYNINPKKT GYRGIHRVYQCYGKRKEHDWKGFTIELQLRTRLQHLWATTVEVVDLCEGKTLKTNPYDADPRWIAFFREMSDFLADEDGF ISLSNEQKKQSLIALNEALNAQKKLESFNLIFSGRKISHDKNKYRYAIIGICLSDKTTHVNFFGERKKHDAIRLYSEIEK NDLWNGLFVEMSDIWQLQYAYPNYLIDTHQFVEKLKSYTESSYWTQPLRFR >Mature_370_residues SDLMSIFGTPTMANAQYEKGKIRLDFSKNQIKKAGESIRKEGVTNEKVQLIQNYRAAHLYPLMIIKNLVWKHIQKIAPNA IIARRLKRLPTIIDKLTRDTLDGINKNTMCVTRMQDIGGCRVIVDNKEQSLRVNSSLEQSRTLYITKLSRDYNINPKKTG YRGIHRVYQCYGKRKEHDWKGFTIELQLRTRLQHLWATTVEVVDLCEGKTLKTNPYDADPRWIAFFREMSDFLADEDGFI SLSNEQKKQSLIALNEALNAQKKLESFNLIFSGRKISHDKNKYRYAIIGICLSDKTTHVNFFGERKKHDAIRLYSEIEKN DLWNGLFVEMSDIWQLQYAYPNYLIDTHQFVEKLKSYTESSYWTQPLRFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43525; Mature: 43393
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLMSIFGTPTMANAQYEKGKIRLDFSKNQIKKAGESIRKEGVTNEKVQLIQNYRAAHL CCCHHHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH YPLMIIKNLVWKHIQKIAPNAIIARRLKRLPTIIDKLTRDTLDGINKNTMCVTRMQDIGG HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHCCCC CRVIVDNKEQSLRVNSSLEQSRTLYITKLSRDYNINPKKTGYRGIHRVYQCYGKRKEHDW EEEEECCCCCCEEECCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC KGFTIELQLRTRLQHLWATTVEVVDLCEGKTLKTNPYDADPRWIAFFREMSDFLADEDGF CCEEEEEEHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCE ISLSNEQKKQSLIALNEALNAQKKLESFNLIFSGRKISHDKNKYRYAIIGICLSDKTTHV EEECCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCEECCCCCCEEEEEEEEEECCCCEEE NFFGERKKHDAIRLYSEIEKNDLWNGLFVEMSDIWQLQYAYPNYLIDTHQFVEKLKSYTE EEECCCCHHHHHHHHHHHHHCCCCCCEEEEEHHHEEEEECCCCCEECHHHHHHHHHHHHC SSYWTQPLRFR CCCCCCCCCCC >Mature Secondary Structure SDLMSIFGTPTMANAQYEKGKIRLDFSKNQIKKAGESIRKEGVTNEKVQLIQNYRAAHL CCHHHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH YPLMIIKNLVWKHIQKIAPNAIIARRLKRLPTIIDKLTRDTLDGINKNTMCVTRMQDIGG HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHCCCC CRVIVDNKEQSLRVNSSLEQSRTLYITKLSRDYNINPKKTGYRGIHRVYQCYGKRKEHDW EEEEECCCCCCEEECCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC KGFTIELQLRTRLQHLWATTVEVVDLCEGKTLKTNPYDADPRWIAFFREMSDFLADEDGF CCEEEEEEHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCE ISLSNEQKKQSLIALNEALNAQKKLESFNLIFSGRKISHDKNKYRYAIIGICLSDKTTHV EEECCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCEECCCCCCEEEEEEEEEECCCCEEE NFFGERKKHDAIRLYSEIEKNDLWNGLFVEMSDIWQLQYAYPNYLIDTHQFVEKLKSYTE EEECCCCHHHHHHHHHHHHHCCCCCCEEEEEHHHEEEEECCCCCEECHHHHHHHHHHHHC SSYWTQPLRFR CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA