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The map label for this gene is rdgB [H]

Identifier: 85058794

GI number: 85058794

Start: 1377364

End: 1377753

Strand: Reverse

Name: rdgB [H]

Synonym: SG0816

Alternate gene names: 85058794

Gene position: 1377753-1377364 (Counterclockwise)

Preceding gene: 85058795

Following gene: 85058793

Centisome position: 33.03

GC content: 52.82

Gene sequence:

>390_bases
ATGAGCGACCTGAATCAGTTTCGTAGTAAAGGGCCGGAACTGTTGGTGGAACTGGCACAGCATACCTCTGAGACTGTCCG
CGAGATTATTGATATCGAACCCGCAGTTGCCGACCAGATTGGTCAGGCCGTCGCGAACCGCATGATGCAGGTCTGGGGTG
GGCAAAACGTCTATTTTCCGATGGGCATGGTCTGGAAGGTCAGCCAGCGCGACCGGGAAATTTTCCTGGAGTTTGACGGG
CGCAACCATCACGAACTGGCCCGCAAATTTGGTGTTTCACTACAGTGGGTTTACAGCGTGGTGAAGCGGGTAAGAAAAGA
AGAACTGGATCGGATGCAGGGCAAACTGTTTGATGGCGAACCTGATGCCGATACAGGGAAAAAGGAGTAA

Upstream 100 bases:

>100_bases
AAACCGGCATCAGCGCGTTACGCTGGCTCAGCAATGAGCAGGCAAGTAGCGTGATTGAGAAACTGAAGAAGTGGCAGCGC
AGAGCTGCGGGAGTGAAGCA

Downstream 100 bases:

>100_bases
TATCTGCAATCAGGCTGGTGCGAGTTCTGTTTTTTTCGGGCCGGTCTGATTTTCACATACTGTAAGGTTATTGCATATTC
CATCCAGTCTCTTCCCATGT

Product: putative phage transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 128

Protein sequence:

>129_residues
MSDLNQFRSKGPELLVELAQHTSETVREIIDIEPAVADQIGQAVANRMMQVWGGQNVYFPMGMVWKVSQRDREIFLEFDG
RNHHELARKFGVSLQWVYSVVKRVRKEELDRMQGKLFDGEPDADTGKKE

Sequences:

>Translated_129_residues
MSDLNQFRSKGPELLVELAQHTSETVREIIDIEPAVADQIGQAVANRMMQVWGGQNVYFPMGMVWKVSQRDREIFLEFDG
RNHHELARKFGVSLQWVYSVVKRVRKEELDRMQGKLFDGEPDADTGKKE
>Mature_128_residues
SDLNQFRSKGPELLVELAQHTSETVREIIDIEPAVADQIGQAVANRMMQVWGGQNVYFPMGMVWKVSQRDREIFLEFDGR
NHHELARKFGVSLQWVYSVVKRVRKEELDRMQGKLFDGEPDADTGKKE

Specific function: Regulates pectin lyase production in response to DNA damage [H]

COG id: COG5566

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the c/mor transcriptional regulatory family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR014875 [H]

Pfam domain/function: PF08765 Mor [H]

EC number: NA

Molecular weight: Translated: 14922; Mature: 14791

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLNQFRSKGPELLVELAQHTSETVREIIDIEPAVADQIGQAVANRMMQVWGGQNVYFP
CCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEC
MGMVWKVSQRDREIFLEFDGRNHHELARKFGVSLQWVYSVVKRVRKEELDRMQGKLFDGE
CCHHEECCCCCCEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDADTGKKE
CCCCCCCCC
>Mature Secondary Structure 
SDLNQFRSKGPELLVELAQHTSETVREIIDIEPAVADQIGQAVANRMMQVWGGQNVYFP
CCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEC
MGMVWKVSQRDREIFLEFDGRNHHELARKFGVSLQWVYSVVKRVRKEELDRMQGKLFDGE
CCHHEECCCCCCEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDADTGKKE
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7715460 [H]