| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is ybeZ [H]
Identifier: 85058788
GI number: 85058788
Start: 1366201
End: 1367295
Strand: Reverse
Name: ybeZ [H]
Synonym: SG0810
Alternate gene names: 85058788
Gene position: 1367295-1366201 (Counterclockwise)
Preceding gene: 85058789
Following gene: 85058787
Centisome position: 32.78
GC content: 56.26
Gene sequence:
>1095_bases TTGAACGTCGAAACCAAAGAAATCATGCTGGAACCCGCAGACAACAACCGTCTGTTGAGCCTCTGTGGGCCGTTTGATGA CAATATCAAGCAACTTGAGCGCCGGTTGGGCATTGAGATCAATCGGCGTGACAATACCTTCAAGCTGGTGGGTAAATCGT TGTGCGTTGACGCCGCCGCGTCGATCCTCACCTCGCTGTACGTCGACACGGCTCCTCTGCGCGGCGTTATCGCCGATATC GAGCCGGAACAAATCCATCTGGCCATCAAACAGAGCCGGGTGCTGGAGCAAACGGCGGAGAGCGTGCCCGATTATGGCCG CGCGGTGAATATACAAACCAAACGTGGCATCATCAAACCGCGCACGCCCAATCAGGCGCAATACATCGCCCACATTCTCG ATCATGACATCACCTTCGGCGTCGGCCCGGCCGGGACCGGCAAAACCTATCTGGCGGTGGCGGCTGCGGTAGACGCGCTG GAGCGCCAGGAAATTCGCCGTATTCTTTTGACCCGCCCGGCGGTGGAAGCAGGCGAGAAACTGGGTTTTCTGCCCGGCGA TCTCAGCCAGAAGGTCGACCCTTATCTGCGCCCGCTTTACGACGCCCTCTTTGAAATGCTGGGCTTTGAGCGGGTGGAAA AACTGATTGAGCGCAATGTCATTGAGGTCGCGCCGCTGGCCTATATGCGCGGACGAACCCTGAACGATGCATTCATTATT CTTGACGAAAGTCAGAACACCACCATCGAACAGATGAAGATGTTCCTGACCCGCATCGGTTTCAATTCCAAAGCGGTCAT CACCGGTGACGTCACTCAAATAGACCTGCCGCGCAATCAGAAATCAGGGTTGCGTCACGCGGTGGAAGTGCTGGAGGAAG TGGAAGAAATCAGTTTCAATTTCTTCCATAGCGAAGACGTGGTACGCCACCCGGTAGTGGCGCGAATTGTCAATGCCTAT GAAGCCTGGGAAACCGCCGATCAAAAACGCAAAGAACAACTCGCCGCCGAGCGCAAACACGAGGCCTTGGCACAGAACAA CGGCGCCGCTCTGGCCGGCCACGGTTCGTCATCCTCCAGGGAGTCTGATGCATGA
Upstream 100 bases:
>100_bases GGGATGCTTCATTTATTAATCTTGGGCCTTCGCTGCCGGCCCTGCCGGCGCACGACCTGGGGTTCACCTTGCAAAAGCTT GAGAGGCCGAGAGGAAAGAT
Downstream 100 bases:
>100_bases GCGACGTGATACTTGACCTGCAGCTGGCCTGCGATGAAGCGCGTGGTTTGCCCGCCGAGGCGGATTTCCTGCGCTGGCTG CAGGGCGTGCTGCCGCTGTT
Product: putative ATP-binding protein in pho regulon
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MNVETKEIMLEPADNNRLLSLCGPFDDNIKQLERRLGIEINRRDNTFKLVGKSLCVDAAASILTSLYVDTAPLRGVIADI EPEQIHLAIKQSRVLEQTAESVPDYGRAVNIQTKRGIIKPRTPNQAQYIAHILDHDITFGVGPAGTGKTYLAVAAAVDAL ERQEIRRILLTRPAVEAGEKLGFLPGDLSQKVDPYLRPLYDALFEMLGFERVEKLIERNVIEVAPLAYMRGRTLNDAFII LDESQNTTIEQMKMFLTRIGFNSKAVITGDVTQIDLPRNQKSGLRHAVEVLEEVEEISFNFFHSEDVVRHPVVARIVNAY EAWETADQKRKEQLAAERKHEALAQNNGAALAGHGSSSSRESDA
Sequences:
>Translated_364_residues MNVETKEIMLEPADNNRLLSLCGPFDDNIKQLERRLGIEINRRDNTFKLVGKSLCVDAAASILTSLYVDTAPLRGVIADI EPEQIHLAIKQSRVLEQTAESVPDYGRAVNIQTKRGIIKPRTPNQAQYIAHILDHDITFGVGPAGTGKTYLAVAAAVDAL ERQEIRRILLTRPAVEAGEKLGFLPGDLSQKVDPYLRPLYDALFEMLGFERVEKLIERNVIEVAPLAYMRGRTLNDAFII LDESQNTTIEQMKMFLTRIGFNSKAVITGDVTQIDLPRNQKSGLRHAVEVLEEVEEISFNFFHSEDVVRHPVVARIVNAY EAWETADQKRKEQLAAERKHEALAQNNGAALAGHGSSSSRESDA >Mature_364_residues MNVETKEIMLEPADNNRLLSLCGPFDDNIKQLERRLGIEINRRDNTFKLVGKSLCVDAAASILTSLYVDTAPLRGVIADI EPEQIHLAIKQSRVLEQTAESVPDYGRAVNIQTKRGIIKPRTPNQAQYIAHILDHDITFGVGPAGTGKTYLAVAAAVDAL ERQEIRRILLTRPAVEAGEKLGFLPGDLSQKVDPYLRPLYDALFEMLGFERVEKLIERNVIEVAPLAYMRGRTLNDAFII LDESQNTTIEQMKMFLTRIGFNSKAVITGDVTQIDLPRNQKSGLRHAVEVLEEVEEISFNFFHSEDVVRHPVVARIVNAY EAWETADQKRKEQLAAERKHEALAQNNGAALAGHGSSSSRESDA
Specific function: Unknown
COG id: COG1702
COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoH family [H]
Homologues:
Organism=Escherichia coli, GI145693103, Length=345, Percent_Identity=89.2753623188406, Blast_Score=617, Evalue=1e-178, Organism=Escherichia coli, GI1787257, Length=205, Percent_Identity=44.8780487804878, Blast_Score=188, Evalue=4e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 40593; Mature: 40593
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVETKEIMLEPADNNRLLSLCGPFDDNIKQLERRLGIEINRRDNTFKLVGKSLCVDAAA CCCCCCCEEEECCCCCCEEEECCCCCHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHH SILTSLYVDTAPLRGVIADIEPEQIHLAIKQSRVLEQTAESVPDYGRAVNIQTKRGIIKP HHHHHHHHCCCCHHHHEECCCHHHEEHHHHHHHHHHHHHHHCCCCCCEEEEEHHCCCCCC RTPNQAQYIAHILDHDITFGVGPAGTGKTYLAVAAAVDALERQEIRRILLTRPAVEAGEK CCCCHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH LGFLPGDLSQKVDPYLRPLYDALFEMLGFERVEKLIERNVIEVAPLAYMRGRTLNDAFII CCCCCCCHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEE LDESQNTTIEQMKMFLTRIGFNSKAVITGDVTQIDLPRNQKSGLRHAVEVLEEVEEISFN EECCCCCHHHHHHHHHHHHCCCCCEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHH FFHSEDVVRHPVVARIVNAYEAWETADQKRKEQLAAERKHEALAQNNGAALAGHGSSSSR HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCC ESDA CCCC >Mature Secondary Structure MNVETKEIMLEPADNNRLLSLCGPFDDNIKQLERRLGIEINRRDNTFKLVGKSLCVDAAA CCCCCCCEEEECCCCCCEEEECCCCCHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHH SILTSLYVDTAPLRGVIADIEPEQIHLAIKQSRVLEQTAESVPDYGRAVNIQTKRGIIKP HHHHHHHHCCCCHHHHEECCCHHHEEHHHHHHHHHHHHHHHCCCCCCEEEEEHHCCCCCC RTPNQAQYIAHILDHDITFGVGPAGTGKTYLAVAAAVDALERQEIRRILLTRPAVEAGEK CCCCHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH LGFLPGDLSQKVDPYLRPLYDALFEMLGFERVEKLIERNVIEVAPLAYMRGRTLNDAFII CCCCCCCHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEE LDESQNTTIEQMKMFLTRIGFNSKAVITGDVTQIDLPRNQKSGLRHAVEVLEEVEEISFN EECCCCCHHHHHHHHHHHHCCCCCEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHH FFHSEDVVRHPVVARIVNAYEAWETADQKRKEQLAAERKHEALAQNNGAALAGHGSSSSR HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCC ESDA CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]