| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is benK [H]
Identifier: 85058715
GI number: 85058715
Start: 1225482
End: 1226870
Strand: Reverse
Name: benK [H]
Synonym: SG0737
Alternate gene names: 85058715
Gene position: 1226870-1225482 (Counterclockwise)
Preceding gene: 85058716
Following gene: 85058713
Centisome position: 29.41
GC content: 37.8
Gene sequence:
>1389_bases ATGCAATCAGTAAAAGTAGGTATCACTGCTATACAACAACTGGATTCAGCTCCCCTAACAAAAAATCAAAAATCCCTTAT ATGTATGCTTACTATTGGAAATATTCTCGAATTTTTTGATTTATTTCTAGTCGGTTTTGTCATTACCCTGCTTATGCAAG ATCAACGGTGGTCATTAGGCACAATACAGTCTGGTTTAATCCTTGCTGGGGCAGGACTTGGAACTGTCATCGGCGCAATT TTTTGGGGGTGGCTTGCTGATAAATATGGCCGTAAGAAATCATTTTTCTCATGTATTTTATTACTTGTAATATTTACCGG ACTGGCTGCACTAACGCCTGAAAATAATTGGCTCTTTTTGTCAATCATGCGAGTTTGCGTAGGTATAGCCGTTGGCGGGC TTAATGTGATTTCTGTGCCTTATGTTCAAGAATTTGTACCTTCTAAAAAAAGAGGACTGTTTACTGGTTTGACTTCAGCA TTTGTACCATTGGGTCTATTTCTCGGATCATTCGCTACTCGTTATCTGGCTGAACCGCTTGGTTGGAGAGGACTTTTAAT TATTGGTTGTCTTCCTGCTATTTTATTAGCATGGAGAAAATTCATTCCAGAATCACCACGATATTTACTCTCTAAAGGAC GTTTTCAGGATGCCCGTGAAGCTTACGCCTGGGCGATGAATATCCCTGTAACTAAAGTGGGGCATTTACCTGAATATGTA TCGATTAGCAAAAGGTCTTATCTAAATATAATAAGGCACTACCCAAAACAACTTACTATTGTCGCTATTGGTTCATTTTC TTTTATACTAGGAAGTTTCGCTATTCAGTCATGGGGACAGGTATTATTGAATCAGATTTTCCATTTTAGTATTAATGTTG TGGCAAATTTATTCATGATACTGTCTTTAGGGGATTTAGTTGGCCGATTATTTTCAGCATGGATTTCCGATTATCTTGGA AGACGTCGAACTCTCTTTTTATTCGGTCTTATTGGTGCTTTTGGATGTATAATTGCAGCATTGTCTATACAGATCAGCAC AATCGTGCATTTTTTAAATTTGAATATGCTATCTTCAAGCTGGATTTTCTTTTTTGGCATTCTTATCGCTATGATGTTTG GCGATGGGGCATTTGGAATTATTAATACATTTGGTGGAGAAATGTTTTCTAATCAGGTACGATCGACCTGTCTTGGACTC GGTTATGGTGTAGGTGCTACCGCTAAAATTGTTGGTCCTGTTTTTCTCGGCGGTCTAATCGATGGCAAAAATTTTTCTGA AAATGTCGTGTTCGTACCTTTCCTCATATTTTCATTTATTTTTTTTATCGGTTCTATCGTTTATCTGTTTGCTCACGAAA CCCGTAATATCCAGCTTGAGTCGATGTAA
Upstream 100 bases:
>100_bases TTTACATAAATTAGCTATTAGCTCTGAACGGCTAATAGATTATAAATATAGGGCCTTCTACCGCTAGGAATACTCTTTTG CGGATACAAAAGGAGCAAGT
Downstream 100 bases:
>100_bases TTGATATCAATCTATGACTCAGATTCGTTAGTATTCATAGATATGAATTTAATCACTTAAGAGCAAATATCTTATGTATA CTCAATAAACTTCAAGATGC
Product: putative transport protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 462; Mature: 462
Protein sequence:
>462_residues MQSVKVGITAIQQLDSAPLTKNQKSLICMLTIGNILEFFDLFLVGFVITLLMQDQRWSLGTIQSGLILAGAGLGTVIGAI FWGWLADKYGRKKSFFSCILLLVIFTGLAALTPENNWLFLSIMRVCVGIAVGGLNVISVPYVQEFVPSKKRGLFTGLTSA FVPLGLFLGSFATRYLAEPLGWRGLLIIGCLPAILLAWRKFIPESPRYLLSKGRFQDAREAYAWAMNIPVTKVGHLPEYV SISKRSYLNIIRHYPKQLTIVAIGSFSFILGSFAIQSWGQVLLNQIFHFSINVVANLFMILSLGDLVGRLFSAWISDYLG RRRTLFLFGLIGAFGCIIAALSIQISTIVHFLNLNMLSSSWIFFFGILIAMMFGDGAFGIINTFGGEMFSNQVRSTCLGL GYGVGATAKIVGPVFLGGLIDGKNFSENVVFVPFLIFSFIFFIGSIVYLFAHETRNIQLESM
Sequences:
>Translated_462_residues MQSVKVGITAIQQLDSAPLTKNQKSLICMLTIGNILEFFDLFLVGFVITLLMQDQRWSLGTIQSGLILAGAGLGTVIGAI FWGWLADKYGRKKSFFSCILLLVIFTGLAALTPENNWLFLSIMRVCVGIAVGGLNVISVPYVQEFVPSKKRGLFTGLTSA FVPLGLFLGSFATRYLAEPLGWRGLLIIGCLPAILLAWRKFIPESPRYLLSKGRFQDAREAYAWAMNIPVTKVGHLPEYV SISKRSYLNIIRHYPKQLTIVAIGSFSFILGSFAIQSWGQVLLNQIFHFSINVVANLFMILSLGDLVGRLFSAWISDYLG RRRTLFLFGLIGAFGCIIAALSIQISTIVHFLNLNMLSSSWIFFFGILIAMMFGDGAFGIINTFGGEMFSNQVRSTCLGL GYGVGATAKIVGPVFLGGLIDGKNFSENVVFVPFLIFSFIFFIGSIVYLFAHETRNIQLESM >Mature_462_residues MQSVKVGITAIQQLDSAPLTKNQKSLICMLTIGNILEFFDLFLVGFVITLLMQDQRWSLGTIQSGLILAGAGLGTVIGAI FWGWLADKYGRKKSFFSCILLLVIFTGLAALTPENNWLFLSIMRVCVGIAVGGLNVISVPYVQEFVPSKKRGLFTGLTSA FVPLGLFLGSFATRYLAEPLGWRGLLIIGCLPAILLAWRKFIPESPRYLLSKGRFQDAREAYAWAMNIPVTKVGHLPEYV SISKRSYLNIIRHYPKQLTIVAIGSFSFILGSFAIQSWGQVLLNQIFHFSINVVANLFMILSLGDLVGRLFSAWISDYLG RRRTLFLFGLIGAFGCIIAALSIQISTIVHFLNLNMLSSSWIFFFGILIAMMFGDGAFGIINTFGGEMFSNQVRSTCLGL GYGVGATAKIVGPVFLGGLIDGKNFSENVVFVPFLIFSFIFFIGSIVYLFAHETRNIQLESM
Specific function: Probable uptake of benzoate [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI90669191, Length=440, Percent_Identity=25.9090909090909, Blast_Score=80, Evalue=4e-15, Organism=Homo sapiens, GI24497497, Length=438, Percent_Identity=26.027397260274, Blast_Score=79, Evalue=8e-15, Organism=Homo sapiens, GI24308167, Length=389, Percent_Identity=24.4215938303342, Blast_Score=70, Evalue=4e-12, Organism=Homo sapiens, GI166197673, Length=364, Percent_Identity=23.9010989010989, Blast_Score=66, Evalue=8e-11, Organism=Escherichia coli, GI87082404, Length=389, Percent_Identity=24.1645244215938, Blast_Score=85, Evalue=1e-17, Organism=Escherichia coli, GI87082231, Length=431, Percent_Identity=22.969837587007, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI87082159, Length=218, Percent_Identity=32.1100917431193, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI1786229, Length=458, Percent_Identity=23.7991266375546, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1789207, Length=185, Percent_Identity=31.8918918918919, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1788074, Length=222, Percent_Identity=28.8288288288288, Blast_Score=66, Evalue=6e-12, Organism=Escherichia coli, GI1789312, Length=148, Percent_Identity=32.4324324324324, Blast_Score=63, Evalue=4e-11, Organism=Caenorhabditis elegans, GI32564663, Length=403, Percent_Identity=22.5806451612903, Blast_Score=79, Evalue=4e-15, Organism=Caenorhabditis elegans, GI193207761, Length=190, Percent_Identity=28.9473684210526, Blast_Score=69, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17559830, Length=190, Percent_Identity=28.9473684210526, Blast_Score=69, Evalue=7e-12, Organism=Saccharomyces cerevisiae, GI6323653, Length=196, Percent_Identity=28.0612244897959, Blast_Score=86, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6321100, Length=304, Percent_Identity=25.6578947368421, Blast_Score=84, Evalue=6e-17, Organism=Saccharomyces cerevisiae, GI6321886, Length=325, Percent_Identity=25.5384615384615, Blast_Score=82, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6322242, Length=307, Percent_Identity=25.4071661237785, Blast_Score=80, Evalue=5e-16, Organism=Saccharomyces cerevisiae, GI6320552, Length=322, Percent_Identity=25.1552795031056, Blast_Score=80, Evalue=7e-16, Organism=Saccharomyces cerevisiae, GI6321888, Length=316, Percent_Identity=23.7341772151899, Blast_Score=78, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6324417, Length=307, Percent_Identity=25.4071661237785, Blast_Score=77, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6321884, Length=190, Percent_Identity=27.8947368421053, Blast_Score=74, Evalue=5e-14, Organism=Saccharomyces cerevisiae, GI6323110, Length=443, Percent_Identity=21.4446952595937, Blast_Score=74, Evalue=6e-14, Organism=Saccharomyces cerevisiae, GI6322247, Length=373, Percent_Identity=23.0563002680965, Blast_Score=74, Evalue=7e-14, Organism=Saccharomyces cerevisiae, GI6320549, Length=196, Percent_Identity=28.0612244897959, Blast_Score=70, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6320550, Length=196, Percent_Identity=28.0612244897959, Blast_Score=70, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6320595, Length=217, Percent_Identity=31.3364055299539, Blast_Score=68, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6320766, Length=311, Percent_Identity=23.4726688102894, Blast_Score=67, Evalue=7e-12, Organism=Saccharomyces cerevisiae, GI6321334, Length=163, Percent_Identity=33.7423312883436, Blast_Score=67, Evalue=8e-12, Organism=Saccharomyces cerevisiae, GI6324400, Length=311, Percent_Identity=23.4726688102894, Blast_Score=66, Evalue=9e-12, Organism=Drosophila melanogaster, GI19922616, Length=408, Percent_Identity=26.4705882352941, Blast_Score=81, Evalue=1e-15, Organism=Drosophila melanogaster, GI24649618, Length=363, Percent_Identity=26.4462809917355, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI24640198, Length=161, Percent_Identity=31.6770186335404, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI24640196, Length=161, Percent_Identity=31.6770186335404, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI24640200, Length=161, Percent_Identity=31.6770186335404, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI24649616, Length=376, Percent_Identity=24.468085106383, Blast_Score=65, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004746 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 50965; Mature: 50965
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSVKVGITAIQQLDSAPLTKNQKSLICMLTIGNILEFFDLFLVGFVITLLMQDQRWSLG CCCHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC TIQSGLILAGAGLGTVIGAIFWGWLADKYGRKKSFFSCILLLVIFTGLAALTPENNWLFL HHCCCCEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHH SIMRVCVGIAVGGLNVISVPYVQEFVPSKKRGLFTGLTSAFVPLGLFLGSFATRYLAEPL HHHHHHHHHHHCCCCEEECHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC GWRGLLIIGCLPAILLAWRKFIPESPRYLLSKGRFQDAREAYAWAMNIPVTKVGHLPEYV CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHCCCCCHHHCCCCHHH SISKRSYLNIIRHYPKQLTIVAIGSFSFILGSFAIQSWGQVLLNQIFHFSINVVANLFMI HHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSLGDLVGRLFSAWISDYLGRRRTLFLFGLIGAFGCIIAALSIQISTIVHFLNLNMLSSS HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WIFFFGILIAMMFGDGAFGIINTFGGEMFSNQVRSTCLGLGYGVGATAKIVGPVFLGGLI HHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC DGKNFSENVVFVPFLIFSFIFFIGSIVYLFAHETRNIQLESM CCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC >Mature Secondary Structure MQSVKVGITAIQQLDSAPLTKNQKSLICMLTIGNILEFFDLFLVGFVITLLMQDQRWSLG CCCHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC TIQSGLILAGAGLGTVIGAIFWGWLADKYGRKKSFFSCILLLVIFTGLAALTPENNWLFL HHCCCCEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHH SIMRVCVGIAVGGLNVISVPYVQEFVPSKKRGLFTGLTSAFVPLGLFLGSFATRYLAEPL HHHHHHHHHHHCCCCEEECHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC GWRGLLIIGCLPAILLAWRKFIPESPRYLLSKGRFQDAREAYAWAMNIPVTKVGHLPEYV CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHCCCCCHHHCCCCHHH SISKRSYLNIIRHYPKQLTIVAIGSFSFILGSFAIQSWGQVLLNQIFHFSINVVANLFMI HHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSLGDLVGRLFSAWISDYLGRRRTLFLFGLIGAFGCIIAALSIQISTIVHFLNLNMLSSS HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WIFFFGILIAMMFGDGAFGIINTFGGEMFSNQVRSTCLGLGYGVGATAKIVGPVFLGGLI HHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC DGKNFSENVVFVPFLIFSFIFFIGSIVYLFAHETRNIQLESM CCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9294456 [H]