| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85058709
Identifier: 85058709
GI number: 85058709
Start: 1219957
End: 1220757
Strand: Reverse
Name: 85058709
Synonym: SG0731
Alternate gene names: NA
Gene position: 1220757-1219957 (Counterclockwise)
Preceding gene: 85058711
Following gene: 85058708
Centisome position: 29.27
GC content: 45.94
Gene sequence:
>801_bases ATGACTAAATTAATTGTAATTGAAAATACCGTTGTTCGTCAGGACGCTTTCGGACGTTACTGTTTGAATGATTTACATCG TGCGGCAGTGGCGCAAGGTAAAGCGACGGAATCTCAGCGCCCATCAAACTTCCTTAAATCAGAAGGAGTAAGTAATTTTG TACAAAAAGCAAGCGAAGCTACGAAAATAGCTTCGGTCAATATCATCAAAGGTGGTATTGAATCTGGTAGCTGGGCAGTT GAGCTTATTGCTATCCGATATGCTGCTTGGATAGACCCCGCTTTTGAAGTTCAGGTTTATGAGCGGTTTAGAGATTCAGT AAAAAGCAATAACGGTGTACTGGTTGAAAAGGTTCAAGCTGGATTGGCAATGCTCGCTTTTTACAAGCAGGAGCTACGTA TTGCACCTTCTGCCATGTTGGGCGCAATGAAAAAACTCCAATCGTCCCTCGGCATGCCAGATATTCTACCAGCCTACGCC ATAGACGCACCAGAGAAAAGTGTAACCGGATCAAGTGAGGTTACACATTCGCTCACTGAGCTTTTACTGCTGCACGGTAA ACCCTATACGCCCCAATCTGGTTATCGGCGGCTGCAACTGCTCGGACTCGCTGAACGTAAATCGCGCCCTAGCAGCAAGC ATCCTGATAAAGAAAAACTGTTCTGGTCGCTAACGGAGAAAGGTTTGCAGTTCGGTAAGAACCTGACAGACAACAATAAC CCGCGCCAGACGCAACCACACTTCTACGACAGCCTCTTTCCCAAGCTTTTAAGCGTCATGATGAACGGAATTGCAGCATA A
Upstream 100 bases:
>100_bases TTTTCTTTAGTTTAAACCTTTTGAGGGTCAACAAGCAAAATTTTAAAAGTCACCCGTCAATGTATTTCAACCAAATTCAT TTAACAATGAAGAAATTATT
Downstream 100 bases:
>100_bases ACCCATGTACGCATTGACGAAAGAGCAAAACATGCGCTATATTCTACTCAGCACCTTAACAAAACGGGTGCCGGGTTTGA CAGCCCAAGTCAAAGAGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MTKLIVIENTVVRQDAFGRYCLNDLHRAAVAQGKATESQRPSNFLKSEGVSNFVQKASEATKIASVNIIKGGIESGSWAV ELIAIRYAAWIDPAFEVQVYERFRDSVKSNNGVLVEKVQAGLAMLAFYKQELRIAPSAMLGAMKKLQSSLGMPDILPAYA IDAPEKSVTGSSEVTHSLTELLLLHGKPYTPQSGYRRLQLLGLAERKSRPSSKHPDKEKLFWSLTEKGLQFGKNLTDNNN PRQTQPHFYDSLFPKLLSVMMNGIAA
Sequences:
>Translated_266_residues MTKLIVIENTVVRQDAFGRYCLNDLHRAAVAQGKATESQRPSNFLKSEGVSNFVQKASEATKIASVNIIKGGIESGSWAV ELIAIRYAAWIDPAFEVQVYERFRDSVKSNNGVLVEKVQAGLAMLAFYKQELRIAPSAMLGAMKKLQSSLGMPDILPAYA IDAPEKSVTGSSEVTHSLTELLLLHGKPYTPQSGYRRLQLLGLAERKSRPSSKHPDKEKLFWSLTEKGLQFGKNLTDNNN PRQTQPHFYDSLFPKLLSVMMNGIAA >Mature_265_residues TKLIVIENTVVRQDAFGRYCLNDLHRAAVAQGKATESQRPSNFLKSEGVSNFVQKASEATKIASVNIIKGGIESGSWAVE LIAIRYAAWIDPAFEVQVYERFRDSVKSNNGVLVEKVQAGLAMLAFYKQELRIAPSAMLGAMKKLQSSLGMPDILPAYAI DAPEKSVTGSSEVTHSLTELLLLHGKPYTPQSGYRRLQLLGLAERKSRPSSKHPDKEKLFWSLTEKGLQFGKNLTDNNNP RQTQPHFYDSLFPKLLSVMMNGIAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29441; Mature: 29310
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKLIVIENTVVRQDAFGRYCLNDLHRAAVAQGKATESQRPSNFLKSEGVSNFVQKASEA CCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCHHHHHHHHHHH TKIASVNIIKGGIESGSWAVELIAIRYAAWIDPAFEVQVYERFRDSVKSNNGVLVEKVQA HHHHEEHEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEHHHHHH GLAMLAFYKQELRIAPSAMLGAMKKLQSSLGMPDILPAYAIDAPEKSVTGSSEVTHSLTE HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHH LLLLHGKPYTPQSGYRRLQLLGLAERKSRPSSKHPDKEKLFWSLTEKGLQFGKNLTDNNN HHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC PRQTQPHFYDSLFPKLLSVMMNGIAA CCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TKLIVIENTVVRQDAFGRYCLNDLHRAAVAQGKATESQRPSNFLKSEGVSNFVQKASEA CEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCHHHHHHHHHHH TKIASVNIIKGGIESGSWAVELIAIRYAAWIDPAFEVQVYERFRDSVKSNNGVLVEKVQA HHHHEEHEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEHHHHHH GLAMLAFYKQELRIAPSAMLGAMKKLQSSLGMPDILPAYAIDAPEKSVTGSSEVTHSLTE HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHH LLLLHGKPYTPQSGYRRLQLLGLAERKSRPSSKHPDKEKLFWSLTEKGLQFGKNLTDNNN HHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC PRQTQPHFYDSLFPKLLSVMMNGIAA CCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA