Click here to switch to the map view.

The map label for this gene is yfdM [C]

Identifier: 85058707

GI number: 85058707

Start: 1216450

End: 1216995

Strand: Reverse

Name: yfdM [C]

Synonym: SG0729

Alternate gene names: 85058707

Gene position: 1216995-1216450 (Counterclockwise)

Preceding gene: 85058708

Following gene: 85058706

Centisome position: 29.18

GC content: 44.14

Gene sequence:

>546_bases
ATGCTAATCAGTAATACACCAAAGTCATTCAAAGACAGATGGCAAACACCTATTGAAGTATTTCGAGCCCTTGATGCTGA
ATTTAATTTCAAACTGGATGCTGCCGCCGATAAAAGCAACGCGCTATGCAAAGCGTTTTTAACTGAACAGCACGACGCAT
TGAAAAGCGACTGGAATAGCAAAGGTGCTATCTTCTGTAATCCGCCATACAGCAAGATTATGCCTTGGGTGAAGAAAGCG
GCTGAGCAGTGTAAAAAACAGAATCAGACTATTGTGATGCTACTGCCTTCTGATACCTCTACAGCATGGTTTTATGAAGC
GTTAAAAACATCTGATGAAGTGCGTTTCATCACCGAGGGACGACTCTCATTTATCTCTGCCGAAACAGGCAAGGAAGGAA
AGGCGGGCAACAGCAAGGGCAGTGTGTTGTTTATCTGGCGACCGTGGCGAATACCTGGATGCTGGATGACGTATGTCCAA
AGAAAAGAATTATTAAAAAAAGGTGTGAATCGTGATAATCGAACTCCCCTTCCCGCCCAGCGTTAA

Upstream 100 bases:

>100_bases
TTAAACTGGTAGAAAGCGGGAATAATCACCCCACCCCACGCTGCATGATTAACAAAGTCTGGAATTCTCCGTTATATAAA
AATCCTACCGTGGTTTAAAT

Downstream 100 bases:

>100_bases
TACTTATTGGCGACATAATTCAAAACGCATTTACCTCAGTGATAAAGCAAAAGAATTTAAAGCAACAACCGCAAAAATTG
TCAAAGAGATGCGCCAGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: DNA N-6-Adenine-Methyltransferase; DNA N-6-Adenine-Methyltransferase Phage Origin; Bacteriophage DNA Methyltransferase; Site-Specific DNA-Methyltransferase; DNA Adenine Methylase; Methyltransferase; Phage DNA Methyltransferase; Prophage; Bacteriophage Protein; Phage N-6-Adenine Methyltransferase

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MLISNTPKSFKDRWQTPIEVFRALDAEFNFKLDAAADKSNALCKAFLTEQHDALKSDWNSKGAIFCNPPYSKIMPWVKKA
AEQCKKQNQTIVMLLPSDTSTAWFYEALKTSDEVRFITEGRLSFISAETGKEGKAGNSKGSVLFIWRPWRIPGCWMTYVQ
RKELLKKGVNRDNRTPLPAQR

Sequences:

>Translated_181_residues
MLISNTPKSFKDRWQTPIEVFRALDAEFNFKLDAAADKSNALCKAFLTEQHDALKSDWNSKGAIFCNPPYSKIMPWVKKA
AEQCKKQNQTIVMLLPSDTSTAWFYEALKTSDEVRFITEGRLSFISAETGKEGKAGNSKGSVLFIWRPWRIPGCWMTYVQ
RKELLKKGVNRDNRTPLPAQR
>Mature_181_residues
MLISNTPKSFKDRWQTPIEVFRALDAEFNFKLDAAADKSNALCKAFLTEQHDALKSDWNSKGAIFCNPPYSKIMPWVKKA
AEQCKKQNQTIVMLLPSDTSTAWFYEALKTSDEVRFITEGRLSFISAETGKEGKAGNSKGSVLFIWRPWRIPGCWMTYVQ
RKELLKKGVNRDNRTPLPAQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20711; Mature: 20711

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLISNTPKSFKDRWQTPIEVFRALDAEFNFKLDAAADKSNALCKAFLTEQHDALKSDWNS
CCCCCCCHHHHHHCCCHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCC
KGAIFCNPPYSKIMPWVKKAAEQCKKQNQTIVMLLPSDTSTAWFYEALKTSDEVRFITEG
CCEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCCCEEEEECC
RLSFISAETGKEGKAGNSKGSVLFIWRPWRIPGCWMTYVQRKELLKKGVNRDNRTPLPAQ
CEEEEECCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
R
C
>Mature Secondary Structure
MLISNTPKSFKDRWQTPIEVFRALDAEFNFKLDAAADKSNALCKAFLTEQHDALKSDWNS
CCCCCCCHHHHHHCCCHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCC
KGAIFCNPPYSKIMPWVKKAAEQCKKQNQTIVMLLPSDTSTAWFYEALKTSDEVRFITEG
CCEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCCCEEEEECC
RLSFISAETGKEGKAGNSKGSVLFIWRPWRIPGCWMTYVQRKELLKKGVNRDNRTPLPAQ
CEEEEECCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA