| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is purK [H]
Identifier: 85058679
GI number: 85058679
Start: 1182518
End: 1183588
Strand: Reverse
Name: purK [H]
Synonym: SG0701
Alternate gene names: 85058679
Gene position: 1183588-1182518 (Counterclockwise)
Preceding gene: 85058680
Following gene: 85058676
Centisome position: 28.38
GC content: 61.53
Gene sequence:
>1071_bases ATGAAGCCCGTCTGCGTTCTGGGCAACGGCCAATTGGGTCGTATGCTGCGGCAAGCCGGCGAGCCGCTGGGCATCGCGGT GTTTCCAGTCGGTCTCGATGCCGAACCCGCATCCGTTCCGTTCCAGCAAAGCGTGATCACCGCCGAAATCGAGCGCTGGC CAGAGACCGCCCTCACCCGCGAACTGGCGCGTCATAATGGCTTTGTCAACCGTGATATTTTTCCCCGGCTGGCCGACCGG TTAACGCAAAAGCAACTGCTGGATCAGTTGCGCCTGGCGACCGCCCCCTGGGAGCCGTTGACGGGCGCAGCCCAATGGCC GGAGGTGTTTGTTTCCTTCGGCGATCTAGCGATTGTCAAACGCCGGCTGGGCGGCTATGACGGTCGCGGGCAATGGCGGC TTCATCCAGGTGACAAGGCCGCCCTGCCCCAGGACTGCTACGGCACCTGCATCGTCGAGCAGGGGATCGCCTTTGACGGA GAAGTGTCGCTGGTGGGCGCCCGTTCCGCCGACGGCGCTCAGGTTTTTTACCCGTTGACCCACAATTTCCACCAGGATGG CATTCTGCGCGCCAGCGTCGCGCTTCCCACCCCGGATAGCAGCCTGCAACGGCAGGCGGAAACTATGCTCGGCGCTATCC TGCACGAACTGAACTATGTCGGCGTGATGGCGATGGAGTGTTTTATCGTCGGCGATCGGCTGCTCATCAATGAACTGGCA CCACGGGTGCATAACAGCGGCCACTGGACGCAAAACGGCTCCTCCATCAGTCAATTCGAGCTGCATTTGCGCGCCATTCT GGGGCTGCCGCTGCCGACTCCGGTCGTTAGCGCGCCCGCTGTGATGGTGAATGTGATTGGCAGCGGGATGAACACCGACT GGCTGGCAGACCCGCTAGTCCATTTGCATTGGTACGAAAAAGAGGTCCGCGCCGGGCGCAAGGTCGGGCACCTAAACCTG TGCCATCCCGATGACGCGGCGCTCAGCCGCAGTCTGCAGCAGTTGATGACGCTGTTACCGGGGGATTATGAAAACTGCAT CCGCTGGGCGAGACAAACACTGGTAGACTGA
Upstream 100 bases:
>100_bases TTTTAGCGCTGCATGATACTGCGCTGGCCGGACGTCTGCGCCAGTGGCGCCAACAGCAAACCGATGAGGTGCTGAGCCAT CCCGATCCGAGGGAACAGGC
Downstream 100 bases:
>100_bases GGATGGCTCCGCCGGGCAGGGCTGCCCGGCAGCCTTGCTTAGGCTTTCACCGCCTGTAGCGCTGCGTTAAGAGTGGCGCT CGGACAGATGGCTTTGCTGG
Product: phosphoribosylaminoimidazole carboxylase ATPase subunit
Products: NA
Alternate protein names: N5-CAIR synthase; 5-(carboxyamino)imidazole ribonucleotide synthetase [H]
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MKPVCVLGNGQLGRMLRQAGEPLGIAVFPVGLDAEPASVPFQQSVITAEIERWPETALTRELARHNGFVNRDIFPRLADR LTQKQLLDQLRLATAPWEPLTGAAQWPEVFVSFGDLAIVKRRLGGYDGRGQWRLHPGDKAALPQDCYGTCIVEQGIAFDG EVSLVGARSADGAQVFYPLTHNFHQDGILRASVALPTPDSSLQRQAETMLGAILHELNYVGVMAMECFIVGDRLLINELA PRVHNSGHWTQNGSSISQFELHLRAILGLPLPTPVVSAPAVMVNVIGSGMNTDWLADPLVHLHWYEKEVRAGRKVGHLNL CHPDDAALSRSLQQLMTLLPGDYENCIRWARQTLVD
Sequences:
>Translated_356_residues MKPVCVLGNGQLGRMLRQAGEPLGIAVFPVGLDAEPASVPFQQSVITAEIERWPETALTRELARHNGFVNRDIFPRLADR LTQKQLLDQLRLATAPWEPLTGAAQWPEVFVSFGDLAIVKRRLGGYDGRGQWRLHPGDKAALPQDCYGTCIVEQGIAFDG EVSLVGARSADGAQVFYPLTHNFHQDGILRASVALPTPDSSLQRQAETMLGAILHELNYVGVMAMECFIVGDRLLINELA PRVHNSGHWTQNGSSISQFELHLRAILGLPLPTPVVSAPAVMVNVIGSGMNTDWLADPLVHLHWYEKEVRAGRKVGHLNL CHPDDAALSRSLQQLMTLLPGDYENCIRWARQTLVD >Mature_356_residues MKPVCVLGNGQLGRMLRQAGEPLGIAVFPVGLDAEPASVPFQQSVITAEIERWPETALTRELARHNGFVNRDIFPRLADR LTQKQLLDQLRLATAPWEPLTGAAQWPEVFVSFGDLAIVKRRLGGYDGRGQWRLHPGDKAALPQDCYGTCIVEQGIAFDG EVSLVGARSADGAQVFYPLTHNFHQDGILRASVALPTPDSSLQRQAETMLGAILHELNYVGVMAMECFIVGDRLLINELA PRVHNSGHWTQNGSSISQFELHLRAILGLPLPTPVVSAPAVMVNVIGSGMNTDWLADPLVHLHWYEKEVRAGRKVGHLNL CHPDDAALSRSLQQLMTLLPGDYENCIRWARQTLVD
Specific function: Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) [H]
COG id: COG0026
COG function: function code F; Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ATP-grasp domain [H]
Homologues:
Organism=Escherichia coli, GI1786733, Length=354, Percent_Identity=71.4689265536723, Blast_Score=508, Evalue=1e-145, Organism=Escherichia coli, GI1788155, Length=212, Percent_Identity=27.8301886792453, Blast_Score=72, Evalue=6e-14, Organism=Saccharomyces cerevisiae, GI6324702, Length=366, Percent_Identity=28.9617486338798, Blast_Score=127, Evalue=2e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005875 - InterPro: IPR011761 - InterPro: IPR003135 - InterPro: IPR013816 - InterPro: IPR013817 - InterPro: IPR016185 - InterPro: IPR011054 [H]
Pfam domain/function: PF02222 ATP-grasp [H]
EC number: =6.3.4.18 [H]
Molecular weight: Translated: 39203; Mature: 39203
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPVCVLGNGQLGRMLRQAGEPLGIAVFPVGLDAEPASVPFQQSVITAEIERWPETALTR CCCEEEECCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCHHHHHH ELARHNGFVNRDIFPRLADRLTQKQLLDQLRLATAPWEPLTGAAQWPEVFVSFGDLAIVK HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH RRLGGYDGRGQWRLHPGDKAALPQDCYGTCIVEQGIAFDGEVSLVGARSADGAQVFYPLT HHHCCCCCCCEEEECCCCCCCCCHHHHHEEEECCCCCCCCCEEEEECCCCCCCEEEEECC HNFHQDGILRASVALPTPDSSLQRQAETMLGAILHELNYVGVMAMECFIVGDRLLINELA CCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH PRVHNSGHWTQNGSSISQFELHLRAILGLPLPTPVVSAPAVMVNVIGSGMNTDWLADPLV HHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHCCHH HLHWYEKEVRAGRKVGHLNLCHPDDAALSRSLQQLMTLLPGDYENCIRWARQTLVD HHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MKPVCVLGNGQLGRMLRQAGEPLGIAVFPVGLDAEPASVPFQQSVITAEIERWPETALTR CCCEEEECCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCHHHHHH ELARHNGFVNRDIFPRLADRLTQKQLLDQLRLATAPWEPLTGAAQWPEVFVSFGDLAIVK HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH RRLGGYDGRGQWRLHPGDKAALPQDCYGTCIVEQGIAFDGEVSLVGARSADGAQVFYPLT HHHCCCCCCCEEEECCCCCCCCCHHHHHEEEECCCCCCCCCEEEEECCCCCCCEEEEECC HNFHQDGILRASVALPTPDSSLQRQAETMLGAILHELNYVGVMAMECFIVGDRLLINELA CCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH PRVHNSGHWTQNGSSISQFELHLRAILGLPLPTPVVSAPAVMVNVIGSGMNTDWLADPLV HHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHCCHH HLHWYEKEVRAGRKVGHLNLCHPDDAALSRSLQQLMTLLPGDYENCIRWARQTLVD HHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2464576; 2644189; 9278503; 1534690; 10569930 [H]