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The map label for this gene is ybbJ [H]

Identifier: 85058675

GI number: 85058675

Start: 1176381

End: 1176758

Strand: Reverse

Name: ybbJ [H]

Synonym: SG0697

Alternate gene names: 85058675

Gene position: 1176758-1176381 (Counterclockwise)

Preceding gene: 85058676

Following gene: 85058673

Centisome position: 28.21

GC content: 65.87

Gene sequence:

>378_bases
ATGATGTGGATGGCGATAGCGGAACATCCGCACAATGTCTGGCTGATTCTGGGCGGCCTGCTGCTGGCGCTGGAAATGCT
GGGCGCAAGCGGGTTTCTGCTGTGGAGCGGTATTGCCGCGCTGCTGGTAGGGCTGGTGCCGATTGGCTGGGAGTGGCAGG
GGGCGACCTTTGCCGTGCTTACCGGTTCGGCCTGGCTGTGGTGGTATCGCCTGCGCGCCAGCGATCGCGGGCGTCCGGTA
TCGGTGTTGAATCAGCGCGGACAGCAGCCATCGAGCTGCGCACGCGCCTATCCGAGCCCCTTAGCAACGGTTTCGGCCGC
CTGCGCGTGGGCGACAGCACCTGGCGCATCCAGGCCAGCGAAGATCTGCCGGCGGTGA

Upstream 100 bases:

>100_bases
GTAAAGTCATTATGATGCCGCTGGACGCCAGTAACCTCCTGGGCGCCATTGGCGGTATTGCTGAACTGATTAATGAGAGT
AAATCCGGTCGGAGCAAGGG

Downstream 100 bases:

>100_bases
CCTGGGTAGAGGTGTACGCCACTGAGGGGATTACCCTGCGGGTGCGGCGCGCCTTACCAGAATAGCGGTAGCAGGCCTGA
GCGGTCCGCCTGCGCCCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MMWMAIAEHPHNVWLILGGLLLALEMLGASGFLLWSGIAALLVGLVPIGWEWQGATFAVLTGSAWLWWYRLRASDRGRPV
SVLNQRGQQPSSCARAYPSPLATVSAACAWATAPGASRPAKICRR

Sequences:

>Translated_125_residues
MMWMAIAEHPHNVWLILGGLLLALEMLGASGFLLWSGIAALLVGLVPIGWEWQGATFAVLTGSAWLWWYRLRASDRGRPV
SVLNQRGQQPSSCARAYPSPLATVSAACAWATAPGASRPAKICRR
>Mature_125_residues
MMWMAIAEHPHNVWLILGGLLLALEMLGASGFLLWSGIAALLVGLVPIGWEWQGATFAVLTGSAWLWWYRLRASDRGRPV
SVLNQRGQQPSSCARAYPSPLATVSAACAWATAPGASRPAKICRR

Specific function: Unknown

COG id: COG1585

COG function: function code OU; Membrane protein implicated in regulation of membrane protease activity

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0826 [H]

Homologues:

Organism=Escherichia coli, GI145693099, Length=102, Percent_Identity=54.9019607843137, Blast_Score=81, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR002810 [H]

Pfam domain/function: PF01957 NfeD [H]

EC number: NA

Molecular weight: Translated: 13542; Mature: 13542

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMWMAIAEHPHNVWLILGGLLLALEMLGASGFLLWSGIAALLVGLVPIGWEWQGATFAVL
CEEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
TGSAWLWWYRLRASDRGRPVSVLNQRGQQPSSCARAYPSPLATVSAACAWATAPGASRPA
ECCCEEEEEEEECCCCCCCHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCH
KICRR
HHHCC
>Mature Secondary Structure
MMWMAIAEHPHNVWLILGGLLLALEMLGASGFLLWSGIAALLVGLVPIGWEWQGATFAVL
CEEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
TGSAWLWWYRLRASDRGRPVSVLNQRGQQPSSCARAYPSPLATVSAACAWATAPGASRPA
ECCCEEEEEEEECCCCCCCHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCH
KICRR
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]