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The map label for this gene is pgl [H]

Identifier: 85058593

GI number: 85058593

Start: 1042168

End: 1042767

Strand: Reverse

Name: pgl [H]

Synonym: SG0615

Alternate gene names: 85058593

Gene position: 1042767-1042168 (Counterclockwise)

Preceding gene: 85058594

Following gene: 85058587

Centisome position: 25.0

GC content: 55.67

Gene sequence:

>600_bases
ATGCGAGCGAGGCCCATAACATTACCCTGTGCGGCGAGTGTATTATTGATGGCGCGGGCCAGTGGTGGGGGATACCTTTC
GCCAGATCGAAGCAGAAGACCGCATGACCCCCGCGAACCTTATGAGCTGGCGCTCGCCGAACGCAATCCCGATTATCTCT
CCCGCCCCGGAGGCAGAGCGCGGCCGCAAACGCAGTTTCTTCGTCCGCCGCTGCTGCAATTTTGGAAATGCAGCCAGATT
CGCCTTGAGGATATCACGCTGCAAAATTCGCCTTTCTGGACCTGCCATACTGTGTATTCGCGGGATATTACCCTCAAGGG
CATCAAAATAATCAATCCCGCCGATGCGATCAATACGGACGCCATCGATCTTGACTCCTCGGAAAATATCCTCATCGAAG
AGTGTCTTTTCGATGTCGGCGATGATGCCGTGACGTTGAAATCAGGCTCAGGCGCGGATGGGTTACGCATTAATATGCCA
ACACGCGGCGTCTCGGTCAGCCAGTGTAAAATTTTGGCAAGTCACGGCGGTATCGCCATCGGATCCGAAACCGCGGGGGG
GGGGGATCGAGGATGTGACGGTACGCGATTGCGTCTTTGA

Upstream 100 bases:

>100_bases
TCCGGGGGCCATCATTCGCTTTATCGCTGACCCCGATTGCTATCCGCCGCTATAGACGCGCTGGGAAGGTATTGAGTGCT
ATGCATGCGGCCGCTGATGT

Downstream 100 bases:

>100_bases
AGGGACTCAGCGGGCGATACGACTGAAATCACGGCGCGGCCGGGGCGGCACCATCAAGAATATCACGCTGAGCAATCTGA
CCATGACCGGCTGTTGGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: PGL; Pectinase [H]

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MRARPITLPCAASVLLMARASGGGYLSPDRSRRPHDPREPYELALAERNPDYLSRPGGRARPQTQFLRPPLLQFWKCSQI
RLEDITLQNSPFWTCHTVYSRDITLKGIKIINPADAINTDAIDLDSSENILIEECLFDVGDDAVTLKSGSGADGLRINMP
TRGVSVSQCKILASHGGIAIGSETAGGGDRGCDGTRLRL

Sequences:

>Translated_199_residues
MRARPITLPCAASVLLMARASGGGYLSPDRSRRPHDPREPYELALAERNPDYLSRPGGRARPQTQFLRPPLLQFWKCSQI
RLEDITLQNSPFWTCHTVYSRDITLKGIKIINPADAINTDAIDLDSSENILIEECLFDVGDDAVTLKSGSGADGLRINMP
TRGVSVSQCKILASHGGIAIGSETAGGGDRGCDGTRLRL
>Mature_199_residues
MRARPITLPCAASVLLMARASGGGYLSPDRSRRPHDPREPYELALAERNPDYLSRPGGRARPQTQFLRPPLLQFWKCSQI
RLEDITLQNSPFWTCHTVYSRDITLKGIKIINPADAINTDAIDLDSSENILIEECLFDVGDDAVTLKSGSGADGLRINMP
TRGVSVSQCKILASHGGIAIGSETAGGGDRGCDGTRLRL

Specific function: Seems to regulates the surface properties of the bacterium in the presence of plant cells or plant cell extracts [H]

COG id: COG5434

COG function: function code M; Endopolygalacturonase

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 4 PbH1 repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000743
- InterPro:   IPR006626
- InterPro:   IPR012334
- InterPro:   IPR011050 [H]

Pfam domain/function: PF00295 Glyco_hydro_28 [H]

EC number: =3.2.1.15 [H]

Molecular weight: Translated: 21632; Mature: 21632

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRARPITLPCAASVLLMARASGGGYLSPDRSRRPHDPREPYELALAERNPDYLSRPGGRA
CCCCCCCCHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHCCCCCC
RPQTQFLRPPLLQFWKCSQIRLEDITLQNSPFWTCHTVYSRDITLKGIKIINPADAINTD
CCCHHHCCCHHHHHHCCCCEEEEEEEECCCCCEEEEEEEECCEEEECEEEECCCCCCCCC
AIDLDSSENILIEECLFDVGDDAVTLKSGSGADGLRINMPTRGVSVSQCKILASHGGIAI
EEECCCCCCEEHHHHHHHCCCCEEEEECCCCCCCEEEECCCCCCCHHHEEEEECCCCEEE
GSETAGGGDRGCDGTRLRL
CCCCCCCCCCCCCCCEECC
>Mature Secondary Structure
MRARPITLPCAASVLLMARASGGGYLSPDRSRRPHDPREPYELALAERNPDYLSRPGGRA
CCCCCCCCHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHCCCCCC
RPQTQFLRPPLLQFWKCSQIRLEDITLQNSPFWTCHTVYSRDITLKGIKIINPADAINTD
CCCHHHCCCHHHHHHCCCCEEEEEEEECCCCCEEEEEEEECCEEEECEEEECCCCCCCCC
AIDLDSSENILIEECLFDVGDDAVTLKSGSGADGLRINMPTRGVSVSQCKILASHGGIAI
EEECCCCCCEEHHHHHHHCCCCEEEEECCCCCCCEEEECCCCCCCHHHEEEEECCCCEEE
GSETAGGGDRGCDGTRLRL
CCCCCCCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1860822 [H]