| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is sfsA
Identifier: 85058471
GI number: 85058471
Start: 850197
End: 850904
Strand: Reverse
Name: sfsA
Synonym: SG0493
Alternate gene names: 85058471
Gene position: 850904-850197 (Counterclockwise)
Preceding gene: 85058473
Following gene: 85058470
Centisome position: 20.4
GC content: 54.38
Gene sequence:
>708_bases ATGCTATTCGAGCCTGCTCTCAAACCCGCCCGACTGATACAACGTTATAAACGTTTTCTTGCCGATGTCGTCACCCCTGA CGGCGAAGCATTAACCCTTCACTGCCCCAATACCGGCGCCATGACCGGCTGTGCTACCCCTGGCGATACCGTATGGTATT CCGCCTCGGATAACCGCAAACGACGTTATCCCCATAGTTGGGAACTAACTGAGACCGCCAGCGGTCAATGGATAGGTGTT AATACGCTGCACGCCAATACCCTGGTGGGGGAGGCGCTACGCGCTGGAACGATTCCAGAGCTGGCCGGATATGCGCATCT TCGCGGCGAAGTGCGATATGGCGCAGAGAACAGCAGGATAGATTGGTTATTATCGGCAGAAGGTCGCGCGGACTGCTATA TTGAGGTGAAATCCGTGACGTTATTGCAACACCAGTCGGGTTATTTCCCGGATGCGGTCACGCTGCGCGGACAAAAACAT TTACGAGAATTACAGGCAATGGCGGAAATGGGGTATCGTGCGGTGCTGTTTTTCGCCGTGCTGCATTCGGGTATCGACCG GGTGTCGCCAGCCCGCCACATTGACCCACACTATGCCGATCTGGTATTACAGGCTCAGCAGTATGGCGTAGAAGTCCTGT GCTATGGTTGTCAGTTATCCCGGCACGGCATGCGTATCCACACTCCGCTGCCGATAATTATTTCATAG
Upstream 100 bases:
>100_bases TTCAGTCTCTAGCTATCGGCGTTTGACAACGGTCGCGTGCGCTATACGCTGGTGCAGAACTGGCCCCTCCACCGCGATGC TCCACATTAAGGAAGGCCTT
Downstream 100 bases:
>100_bases GGCGGTTATCGGCAAAATGGCGTAAAATGCGTCAGTTTTCCAAAGTTTACCGTCGCGCTAAATACGCCTTTCCTGACACC CCTGTCAAGTAGGCGTTATG
Product: sugar fermentation stimulation protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MLFEPALKPARLIQRYKRFLADVVTPDGEALTLHCPNTGAMTGCATPGDTVWYSASDNRKRRYPHSWELTETASGQWIGV NTLHANTLVGEALRAGTIPELAGYAHLRGEVRYGAENSRIDWLLSAEGRADCYIEVKSVTLLQHQSGYFPDAVTLRGQKH LRELQAMAEMGYRAVLFFAVLHSGIDRVSPARHIDPHYADLVLQAQQYGVEVLCYGCQLSRHGMRIHTPLPIIIS
Sequences:
>Translated_235_residues MLFEPALKPARLIQRYKRFLADVVTPDGEALTLHCPNTGAMTGCATPGDTVWYSASDNRKRRYPHSWELTETASGQWIGV NTLHANTLVGEALRAGTIPELAGYAHLRGEVRYGAENSRIDWLLSAEGRADCYIEVKSVTLLQHQSGYFPDAVTLRGQKH LRELQAMAEMGYRAVLFFAVLHSGIDRVSPARHIDPHYADLVLQAQQYGVEVLCYGCQLSRHGMRIHTPLPIIIS >Mature_235_residues MLFEPALKPARLIQRYKRFLADVVTPDGEALTLHCPNTGAMTGCATPGDTVWYSASDNRKRRYPHSWELTETASGQWIGV NTLHANTLVGEALRAGTIPELAGYAHLRGEVRYGAENSRIDWLLSAEGRADCYIEVKSVTLLQHQSGYFPDAVTLRGQKH LRELQAMAEMGYRAVLFFAVLHSGIDRVSPARHIDPHYADLVLQAQQYGVEVLCYGCQLSRHGMRIHTPLPIIIS
Specific function: Probable Regulatory Factor Involved In Maltose Metabolism. [C]
COG id: COG1489
COG function: function code R; DNA-binding protein, stimulates sugar fermentation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sfsA family
Homologues:
Organism=Escherichia coli, GI1786340, Length=234, Percent_Identity=65.3846153846154, Blast_Score=328, Evalue=3e-91,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): SFSA_SODGM (Q2NVQ7)
Other databases:
- EMBL: AP008232 - RefSeq: YP_454173.1 - STRING: Q2NVQ7 - GeneID: 3868272 - GenomeReviews: AP008232_GR - KEGG: sgl:SG0493 - NMPDR: fig|343509.6.peg.1100 - eggNOG: COG1489 - HOGENOM: HBG655520 - OMA: NTGSMLN - PhylomeDB: Q2NVQ7 - BioCyc: SGLO343509:SG0493-MONOMER - HAMAP: MF_00095 - InterPro: IPR005224 - TIGRFAMs: TIGR00230
Pfam domain/function: PF03749 SfsA
EC number: NA
Molecular weight: Translated: 26197; Mature: 26197
Theoretical pI: Translated: 7.64; Mature: 7.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFEPALKPARLIQRYKRFLADVVTPDGEALTLHCPNTGAMTGCATPGDTVWYSASDNRK CCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCCC RRYPHSWELTETASGQWIGVNTLHANTLVGEALRAGTIPELAGYAHLRGEVRYGAENSRI CCCCCCCCEEECCCCCEEEEEEEEHHHHHHHHHHCCCCHHHHHHHHHCCEEEECCCCCCE DWLLSAEGRADCYIEVKSVTLLQHQSGYFPDAVTLRGQKHLRELQAMAEMGYRAVLFFAV EEEEECCCCCEEEEEEEEEEEEECCCCCCCCCEEECCHHHHHHHHHHHHCCHHHHHHHHH LHSGIDRVSPARHIDPHYADLVLQAQQYGVEVLCYGCQLSRHGMRIHTPLPIIIS HHHCHHHCCCCCCCCCHHHHHHHHHHHCCEEEEEEECEECCCCEEEECCCCEEEC >Mature Secondary Structure MLFEPALKPARLIQRYKRFLADVVTPDGEALTLHCPNTGAMTGCATPGDTVWYSASDNRK CCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCCC RRYPHSWELTETASGQWIGVNTLHANTLVGEALRAGTIPELAGYAHLRGEVRYGAENSRI CCCCCCCCEEECCCCCEEEEEEEEHHHHHHHHHHCCCCHHHHHHHHHCCEEEECCCCCCE DWLLSAEGRADCYIEVKSVTLLQHQSGYFPDAVTLRGQKHLRELQAMAEMGYRAVLFFAV EEEEECCCCCEEEEEEEEEEEEECCCCCCCCCEEECCHHHHHHHHHHHHCCHHHHHHHHH LHSGIDRVSPARHIDPHYADLVLQAQQYGVEVLCYGCQLSRHGMRIHTPLPIIIS HHHCHHHCCCCCCCCCHHHHHHHHHHHCCEEEEEEECEECCCCEEEECCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA