| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is apaH
Identifier: 85058400
GI number: 85058400
Start: 744919
End: 745767
Strand: Reverse
Name: apaH
Synonym: SG0422
Alternate gene names: 85058400
Gene position: 745767-744919 (Counterclockwise)
Preceding gene: 85058401
Following gene: 85058390
Centisome position: 17.88
GC content: 59.01
Gene sequence:
>849_bases ATGTCGACTTATTTAATTGGTGATATTCACGGCTGCTACGATGAGCTGAAAATCATATTGGCGCAGGTCCGGTTCGATCC AGCGGTGGATACGCTGTGGCTGACCGGCGATCTGGTCGCGCGCGGGACCGGTTCGCTAGAGGTATTGCGTCTGGTGCGCA GTCTGGGCGACAGCGTACAGTTGGTGCTGGGCAATCACGATCTCCATCTTTTGGCGGTGTATGCCGGCATCAGCCGCAAT AAGCCGAAAGATCGCATCACGCCGCTGCTGGAAGCGCCGGACGCTGATGAATTAATCAACTGGCTCCGCCGTCAGCCGGT GCTACAGGTGGATGAAGAGAAAAAATTGGTCATGGCTCACGCCGGCATTACGCCGCAGTGGGACCTCGCCACGGCGCGCC AGTGCGCCCGTGAGGTGGAAGCGGTACTGAAGAGCGACAGCTATCCGCTGTTCCTCGACGCCATGTACGGCGATATGCCT AACAACTGGAGCCCTGAGCTAAGCGGTCTGGCGCGCCTGCGGTTCAGTACCAATGTCTTTACCCGCATGCGCTACTGCTT CCCCAACGGTCAGCTGGAAATGAACTGCAAGGATACTCCGGAAAAAGCGTCGACGCCGCTGCGGCCGTGGTTCGCGCTAC CGGGGCCAGTGTCTGAGCGCTATAGCATTGTTTTCGGTCATTGGGCCTCGCTGATGGGCCAGGGAACGCCGGCGCACATC TACGGGCTTGACACCGGCTGCTGTTGGGGCGGCGAATTGACCCTGCTGCGTTGGGAAGACAAGGCGTTTACCCGCGTACC CTCGAACCGTCAAAACGAAACCAGCGTCGAAAATCCCATCAGCGCCTGA
Upstream 100 bases:
>100_bases CCATGCAAGGCCATTACGATATGGTCGATGACCAAGGACAGGGATTTCACGTTGCCATCCCCGTCTTCCGCCTGGCGATT CCTTCTCTTATAAACTAACT
Downstream 100 bases:
>100_bases GGTCCACGCCCCTTAATCTGGCGGTTTAACGGCCTGACGGTTCGGCGGTGTTCCGAATCCAGCGCGGGGGCGCCCCGGGA GGGTCTGGCATCAAACGCGT
Product: diadenosine tetraphosphatase
Products: NA
Alternate protein names: Ap4A hydrolase; Diadenosine 5',5'''-P1,P4-tetraphosphate pyrophosphohydrolase; Diadenosine tetraphosphatase
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MSTYLIGDIHGCYDELKIILAQVRFDPAVDTLWLTGDLVARGTGSLEVLRLVRSLGDSVQLVLGNHDLHLLAVYAGISRN KPKDRITPLLEAPDADELINWLRRQPVLQVDEEKKLVMAHAGITPQWDLATARQCAREVEAVLKSDSYPLFLDAMYGDMP NNWSPELSGLARLRFSTNVFTRMRYCFPNGQLEMNCKDTPEKASTPLRPWFALPGPVSERYSIVFGHWASLMGQGTPAHI YGLDTGCCWGGELTLLRWEDKAFTRVPSNRQNETSVENPISA
Sequences:
>Translated_282_residues MSTYLIGDIHGCYDELKIILAQVRFDPAVDTLWLTGDLVARGTGSLEVLRLVRSLGDSVQLVLGNHDLHLLAVYAGISRN KPKDRITPLLEAPDADELINWLRRQPVLQVDEEKKLVMAHAGITPQWDLATARQCAREVEAVLKSDSYPLFLDAMYGDMP NNWSPELSGLARLRFSTNVFTRMRYCFPNGQLEMNCKDTPEKASTPLRPWFALPGPVSERYSIVFGHWASLMGQGTPAHI YGLDTGCCWGGELTLLRWEDKAFTRVPSNRQNETSVENPISA >Mature_281_residues STYLIGDIHGCYDELKIILAQVRFDPAVDTLWLTGDLVARGTGSLEVLRLVRSLGDSVQLVLGNHDLHLLAVYAGISRNK PKDRITPLLEAPDADELINWLRRQPVLQVDEEKKLVMAHAGITPQWDLATARQCAREVEAVLKSDSYPLFLDAMYGDMPN NWSPELSGLARLRFSTNVFTRMRYCFPNGQLEMNCKDTPEKASTPLRPWFALPGPVSERYSIVFGHWASLMGQGTPAHIY GLDTGCCWGGELTLLRWEDKAFTRVPSNRQNETSVENPISA
Specific function: Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
COG id: COG0639
COG function: function code T; Diadenosine tetraphosphatase and related serine/threonine protein phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Ap4A hydrolase family
Homologues:
Organism=Escherichia coli, GI1786234, Length=273, Percent_Identity=78.021978021978, Blast_Score=461, Evalue=1e-131,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): APAH_SODGM (Q2NVX8)
Other databases:
- EMBL: AP008232 - RefSeq: YP_454102.1 - ProteinModelPortal: Q2NVX8 - SMR: Q2NVX8 - STRING: Q2NVX8 - GeneID: 3867533 - GenomeReviews: AP008232_GR - KEGG: sgl:SG0422 - NMPDR: fig|343509.6.peg.986 - eggNOG: COG0639 - HOGENOM: HBG724457 - OMA: LVFGHWA - PhylomeDB: Q2NVX8 - ProtClustDB: PRK00166 - BioCyc: SGLO343509:SG0422-MONOMER - HAMAP: MF_00199 - InterPro: IPR004617 - InterPro: IPR004843 - InterPro: IPR006186 - PANTHER: PTHR11668 - PIRSF: PIRSF000903 - TIGRFAMs: TIGR00668
Pfam domain/function: PF00149 Metallophos
EC number: =3.6.1.41
Molecular weight: Translated: 31600; Mature: 31469
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTYLIGDIHGCYDELKIILAQVRFDPAVDTLWLTGDLVARGTGSLEVLRLVRSLGDSVQ CCCEEEECHHHHHHHHHHHHHHHHCCCCCCEEEEECCEEECCCCHHHHHHHHHHCCCCEE LVLGNHDLHLLAVYAGISRNKPKDRITPLLEAPDADELINWLRRQPVLQVDEEKKLVMAH EEECCCCEEEEEEEECCCCCCCHHHCCHHHCCCCHHHHHHHHHHCCCEEECCCCEEEEEE AGITPQWDLATARQCAREVEAVLKSDSYPLFLDAMYGDMPNNWSPELSGLARLRFSTNVF CCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH TRMRYCFPNGQLEMNCKDTPEKASTPLRPWFALPGPVSERYSIVFGHWASLMGQGTPAHI HHHHEECCCCEEEECCCCCCHHCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHCCCCCEEE YGLDTGCCWGGELTLLRWEDKAFTRVPSNRQNETSVENPISA EECCCCCEECCCEEEEEECCCHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure STYLIGDIHGCYDELKIILAQVRFDPAVDTLWLTGDLVARGTGSLEVLRLVRSLGDSVQ CCEEEECHHHHHHHHHHHHHHHHCCCCCCEEEEECCEEECCCCHHHHHHHHHHCCCCEE LVLGNHDLHLLAVYAGISRNKPKDRITPLLEAPDADELINWLRRQPVLQVDEEKKLVMAH EEECCCCEEEEEEEECCCCCCCHHHCCHHHCCCCHHHHHHHHHHCCCEEECCCCEEEEEE AGITPQWDLATARQCAREVEAVLKSDSYPLFLDAMYGDMPNNWSPELSGLARLRFSTNVF CCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH TRMRYCFPNGQLEMNCKDTPEKASTPLRPWFALPGPVSERYSIVFGHWASLMGQGTPAHI HHHHEECCCCEEEECCCCCCHHCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHCCCCCEEE YGLDTGCCWGGELTLLRWEDKAFTRVPSNRQNETSVENPISA EECCCCCEECCCEEEEEECCCHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA