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The map label for this gene is yhbQ [C]

Identifier: 85058365

GI number: 85058365

Start: 688316

End: 688639

Strand: Reverse

Name: yhbQ [C]

Synonym: SG0387

Alternate gene names: 85058365

Gene position: 688639-688316 (Counterclockwise)

Preceding gene: 85058366

Following gene: 85058362

Centisome position: 16.51

GC content: 60.8

Gene sequence:

>324_bases
ATGTGCAGCTCCCTCTGGCATCTTTACCTCATCCGCACCGCCAGCGGTATGCTTTATACCGGTATTACCACCGATGTCCA
GCGGCGTTTAGACCAACATCAGCGCGGCGGCGGCGCCAAATCGCTGCGCGGTAAGGGCCCGCTGACGCTGGTGTTTCAGA
GCCCGGCAGGCGATCGCAGCAGAGTGCTGCGCTGGGAATACCGGGTAAAGCAACTGTCGCGGGCGCAAAAAGAGCACTTC
GTTGCCTTACAAGAGCAGGCTTTGCCACATTTTGGGCTAGAGCACAGCGCCCTCGCAGCAGGAAAATCCGCCCCCGCCCG
CTGA

Upstream 100 bases:

>100_bases
CCCCCCGCGGGCGAACTGACCTGCGCGCGGTGGCAGTCGCGGGCGGATTCCGCTACACTCGGCGCAGCCCCTTTATCGTG
TCATTTCAGGGATTATAACG

Downstream 100 bases:

>100_bases
TACCCAGCAAACACCAGGGGCACAGCCGGCGGCAGCCAAGGCTCGGCAACCGAAGGGGTAATCCGTGGTTAACCCGAGCC
ATGGGCGAACGGCGCCGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MCSSLWHLYLIRTASGMLYTGITTDVQRRLDQHQRGGGAKSLRGKGPLTLVFQSPAGDRSRVLRWEYRVKQLSRAQKEHF
VALQEQALPHFGLEHSALAAGKSAPAR

Sequences:

>Translated_107_residues
MCSSLWHLYLIRTASGMLYTGITTDVQRRLDQHQRGGGAKSLRGKGPLTLVFQSPAGDRSRVLRWEYRVKQLSRAQKEHF
VALQEQALPHFGLEHSALAAGKSAPAR
>Mature_107_residues
MCSSLWHLYLIRTASGMLYTGITTDVQRRLDQHQRGGGAKSLRGKGPLTLVFQSPAGDRSRVLRWEYRVKQLSRAQKEHF
VALQEQALPHFGLEHSALAAGKSAPAR

Specific function: Unknown

COG id: COG2827

COG function: function code L; Predicted endonuclease containing a URI domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0213 family

Homologues:

Organism=Escherichia coli, GI1789545, Length=77, Percent_Identity=71.4285714285714, Blast_Score=113, Evalue=3e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y387_SODGM (Q2NW13)

Other databases:

- EMBL:   AP008232
- RefSeq:   YP_454067.1
- ProteinModelPortal:   Q2NW13
- SMR:   Q2NW13
- STRING:   Q2NW13
- GeneID:   3867634
- GenomeReviews:   AP008232_GR
- KEGG:   sgl:SG0387
- NMPDR:   fig|343509.6.peg.912
- eggNOG:   COG2827
- HOGENOM:   HBG678874
- OMA:   GSLYCGI
- PhylomeDB:   Q2NW13
- BioCyc:   SGLO343509:SG0387-MONOMER
- GO:   GO:0005622
- HAMAP:   MF_01029
- InterPro:   IPR022992
- InterPro:   IPR000305

Pfam domain/function: PF01541 GIY-YIG; SSF82771 UvrC_N

EC number: NA

Molecular weight: Translated: 11955; Mature: 11955

Theoretical pI: Translated: 11.23; Mature: 11.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCSSLWHLYLIRTASGMLYTGITTDVQRRLDQHQRGGGAKSLRGKGPLTLVFQSPAGDRS
CCCHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCHH
RVLRWEYRVKQLSRAQKEHFVALQEQALPHFGLEHSALAAGKSAPAR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCC
>Mature Secondary Structure
MCSSLWHLYLIRTASGMLYTGITTDVQRRLDQHQRGGGAKSLRGKGPLTLVFQSPAGDRS
CCCHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCHH
RVLRWEYRVKQLSRAQKEHFVALQEQALPHFGLEHSALAAGKSAPAR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA