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The map label for this gene is dcrB [H]

Identifier: 85058055

GI number: 85058055

Start: 126303

End: 126863

Strand: Reverse

Name: dcrB [H]

Synonym: SG0077

Alternate gene names: 85058055

Gene position: 126863-126303 (Counterclockwise)

Preceding gene: 85058056

Following gene: 85058054

Centisome position: 3.04

GC content: 54.9

Gene sequence:

>561_bases
ATGCGTAAAGTAGCGAAGTATCTGGGCATTGGGATGCTGGTCTTCGGCCTGTCGGCCTGCGACAACAGCAAAGATAAGGA
GACCGTCGGCGCACCTGACGGCGCCGAGCAGACCCAGGCGGAGAATAAAATCAGCCTGTTGGATGGCAAGTTGGCTTTTA
CATTGCCGGGAGATATGAGCGATCAAAGCGGTAAAGTAGGGACGCAGGCAAACAACATGCATGTCTATGCGGATTCAACC
GGCCGCAAAGCGGTCATTATCATCCTGAGCGATGATACGCCGCAGGGGCTAGATACGCTGGCGCAACGACTGGAAAACGA
GCAACGCGCCCGCGATCCGGATTTGCAAGTTGTCACGAACAAAGCTATTACCGTCAACGGCAAACCACTGCAACAGCTGG
ACAGCATTGTCGCCAGCGGCGGCAAACAGGCCTATTCGGCGGTCGTGTTGGGTAAAGTGGACAATCATCTGCTGACGATG
CAGGTTACCCTGCCGGCGGACGATCAACAGAAAGCCCAGAGCGCCGCGGAAAGCATCATCAAGACGCTGACGTTTAAATA
A

Upstream 100 bases:

>100_bases
GGGCAGACGGCCCCCCCTCACTGCCGCTTGTGGCAGCGTCATCTGCTGATGGGATCCACCGCCTCGACGGCGGGATAATA
TGGAGTTAGAAGGTAAATCT

Downstream 100 bases:

>100_bases
TGCCGGCAACGCCGCGTCATCAACAGTCGACCCGACGCGGCCAGCGAAGCGCATAAGGTCATCACGTGTTGAGCGTCAAT
GTGGCAAAGACGGCGCGTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MRKVAKYLGIGMLVFGLSACDNSKDKETVGAPDGAEQTQAENKISLLDGKLAFTLPGDMSDQSGKVGTQANNMHVYADST
GRKAVIIILSDDTPQGLDTLAQRLENEQRARDPDLQVVTNKAITVNGKPLQQLDSIVASGGKQAYSAVVLGKVDNHLLTM
QVTLPADDQQKAQSAAESIIKTLTFK

Sequences:

>Translated_186_residues
MRKVAKYLGIGMLVFGLSACDNSKDKETVGAPDGAEQTQAENKISLLDGKLAFTLPGDMSDQSGKVGTQANNMHVYADST
GRKAVIIILSDDTPQGLDTLAQRLENEQRARDPDLQVVTNKAITVNGKPLQQLDSIVASGGKQAYSAVVLGKVDNHLLTM
QVTLPADDQQKAQSAAESIIKTLTFK
>Mature_186_residues
MRKVAKYLGIGMLVFGLSACDNSKDKETVGAPDGAEQTQAENKISLLDGKLAFTLPGDMSDQSGKVGTQANNMHVYADST
GRKAVIIILSDDTPQGLDTLAQRLENEQRARDPDLQVVTNKAITVNGKPLQQLDSIVASGGKQAYSAVVLGKVDNHLLTM
QVTLPADDQQKAQSAAESIIKTLTFK

Specific function: Required for phage C1 adsorption [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082269, Length=188, Percent_Identity=60.6382978723404, Blast_Score=234, Evalue=4e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014894 [H]

Pfam domain/function: PF08786 DUF1795 [H]

EC number: NA

Molecular weight: Translated: 19842; Mature: 19842

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKVAKYLGIGMLVFGLSACDNSKDKETVGAPDGAEQTQAENKISLLDGKLAFTLPGDMS
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCEEEEECCEEEEEECCCCC
DQSGKVGTQANNMHVYADSTGRKAVIIILSDDTPQGLDTLAQRLENEQRARDPDLQVVTN
CCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEC
KAITVNGKPLQQLDSIVASGGKQAYSAVVLGKVDNHLLTMQVTLPADDQQKAQSAAESII
CEEEECCCCHHHHHHHHHCCCCHHHEEEEEECCCCEEEEEEEEECCCHHHHHHHHHHHHH
KTLTFK
HHHCCC
>Mature Secondary Structure
MRKVAKYLGIGMLVFGLSACDNSKDKETVGAPDGAEQTQAENKISLLDGKLAFTLPGDMS
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCEEEEECCEEEEEECCCCC
DQSGKVGTQANNMHVYADSTGRKAVIIILSDDTPQGLDTLAQRLENEQRARDPDLQVVTN
CCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEC
KAITVNGKPLQQLDSIVASGGKQAYSAVVLGKVDNHLLTMQVTLPADDQQKAQSAAESII
CEEEECCCCHHHHHHHHHCCCCHHHEEEEEECCCCEEEEEEEEECCCHHHHHHHHHHHHH
KTLTFK
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503; 8752353 [H]