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The map label for this gene is oxaA

Identifier: 84626027

GI number: 84626027

Start: 4937637

End: 4939373

Strand: Reverse

Name: oxaA

Synonym: XOO_4370

Alternate gene names: 84626027

Gene position: 4939373-4937637 (Counterclockwise)

Preceding gene: 84626028

Following gene: 84626026

Centisome position: 99.98

GC content: 64.13

Gene sequence:

>1737_bases
ATGAACCAGACCCGTGTTTTCCTGATTTTTGCCTGGCTGATGGTCGCGGCGCTGCTGTGGATGGAGTGGGGCAAAGAAAA
AGCGGCTGCCAATGCGCCCGGGGCGGCTGCGACGCAATCGGTGCCGGCGGCACGTGATCTGGATGCGGCAACGCCAAGCG
CGGCGAATGTGCCTGCAGCTCAGCCGATTGCGCAGGCTGGTGCGCCGGGTACGGTTCCGGCAACCAGCACCACCACCGCG
ACCGCGACCGCGACACCGGCTGCTGCCGGCGCTGCACCGGTGGTCACCCTGACCTCGGACGTGCTGCGCCTGAAGCTGGA
TGGCCGCAGCGTGCTCGACGCCGAGCTGCTGCAGTTCCCGCAGACCAAGGACGGCACCGCGCCGGTCAGCCTGCTGACGG
AAGACGCGGCGCACCCGTACAACGCCACCAGTGGCTGGGCCAGTGAGCATTCGCCGGTGCCGGGCGTCGGCGGCTTTCGC
GCAGAACAGCCTGGCACGACGTTCGAACTCGCCAAGGGCCAGAACACGCTGGTGGTGCCGTTCGTGTGGAATGGCCCCAA
CGGCGTGTCGATCCGTCGCACCTTTACCCTGGAACGTGGTCGCTATGCGATCTCGATCAAGGATGAAGTGATCAACAAGA
GCGCCGCGCCGTGGAACGGTTATGTGTTCCGCAAGCTGAGTCGGGTGCCGACCATCCTCAGCCGCGGCATGACCAATCCG
GATTCCTTCAGCTTCAACGGGGCGACCTGGTACAGCCCGCAGGCAGGCTACGAGCGTCGTGCGTTCAAGGACTACATGGA
CGACGGCGGCCTCAATCGCCAGATCACCGGCGGCTGGATAGCGCTGTTGCAGCACCACTTCTTCACCGCGTGGATTCCGC
AGAACGACCAAGCCTCGCTGTATGTGTTGAACAAGGACGGCCCACGCGACGTGGCCGAGTTGCGCGGCCCGGCTTTCACC
GTGGCGCCGGGCCAGACCGCGACCACCGAAGCGCGCCTGTGGGTGGGTCCGAAGCTGGTCAGTCTGATCGCCAAGGAAGA
CGTGAAGGGGCTGGACCGCGTGATCGATTACAGCCGCTTCTCGATCATGGCCATCATCGGCCAGGGCCTGTTCTGGGTGC
TGAGCCATCTGCACAGCTTCCTGCACAACTGGGGCTGGGCGATCGTCGGCCTGGTGGTGTTGCTGCGGTTGGTGCTGTAT
CCGCTGTCGTCTGCGCAGTACAAGTCCAGTGCCAAGATGCGCAAGTTCCAGCCGCGCCTGGCGCAACTCAAGGAGCGCTA
CGGCGACGATCGCGTCAAGTATCAGCAGGCCACGATGGAGCTGTTCAAGAAGGAAAAGATCAACCCGATGGGCGGCTGCC
TGCCGCTGCTGATCCAGATGCCGATCTTCTTCGCGCTGTACTGGGTGCTGGTGGAGTCGGTGGAACTGCGTCAGGCGCCG
TGGCTGGGCTGGATCCAGGACCTGACCGCGCGCGACCCGCACTTCATCCTCCCGGCGCTCAACATCGCGATCATGTGGGC
GACGCAGAAGCTTACCCCGACCCCGGGCATCGATCCGATGCAGGCCAAGATGATGCAGTTCATGCCGCTGGTGTTCGGCG
CCATGATGGCCTTCGTGCCGTCCGGTCTGGTGCTGTACTGGGTGGTCAACGGCGGTTTGAATCTGCTTATCCAGTGGTGG
ATGATCCGCCAGCACGGCGAGAAGCCGAGCAAGATCATCCGGGCCAACGCCAAGTAA

Upstream 100 bases:

>100_bases
GCTGCGCCCGGCACAATGCCGCCCGCCAGGACGATGCACCCATCCTCCCTTTCCCCGACAGAGCCGGACCTTTAGTTCCG
ACTGAGCGAGTTGCTGCCCG

Downstream 100 bases:

>100_bases
GTTGAAGAAGGCCCGCCGCAAGGCGGGCTTTCTGCATGTCAGCCCGCATCTGTTGTCTCTTTCGCCAAGGACGCCGTCGT
GACCACATCGCCGTTGCATC

Product: putative inner membrane protein translocase component YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 578; Mature: 578

Protein sequence:

>578_residues
MNQTRVFLIFAWLMVAALLWMEWGKEKAAANAPGAAATQSVPAARDLDAATPSAANVPAAQPIAQAGAPGTVPATSTTTA
TATATPAAAGAAPVVTLTSDVLRLKLDGRSVLDAELLQFPQTKDGTAPVSLLTEDAAHPYNATSGWASEHSPVPGVGGFR
AEQPGTTFELAKGQNTLVVPFVWNGPNGVSIRRTFTLERGRYAISIKDEVINKSAAPWNGYVFRKLSRVPTILSRGMTNP
DSFSFNGATWYSPQAGYERRAFKDYMDDGGLNRQITGGWIALLQHHFFTAWIPQNDQASLYVLNKDGPRDVAELRGPAFT
VAPGQTATTEARLWVGPKLVSLIAKEDVKGLDRVIDYSRFSIMAIIGQGLFWVLSHLHSFLHNWGWAIVGLVVLLRLVLY
PLSSAQYKSSAKMRKFQPRLAQLKERYGDDRVKYQQATMELFKKEKINPMGGCLPLLIQMPIFFALYWVLVESVELRQAP
WLGWIQDLTARDPHFILPALNIAIMWATQKLTPTPGIDPMQAKMMQFMPLVFGAMMAFVPSGLVLYWVVNGGLNLLIQWW
MIRQHGEKPSKIIRANAK

Sequences:

>Translated_578_residues
MNQTRVFLIFAWLMVAALLWMEWGKEKAAANAPGAAATQSVPAARDLDAATPSAANVPAAQPIAQAGAPGTVPATSTTTA
TATATPAAAGAAPVVTLTSDVLRLKLDGRSVLDAELLQFPQTKDGTAPVSLLTEDAAHPYNATSGWASEHSPVPGVGGFR
AEQPGTTFELAKGQNTLVVPFVWNGPNGVSIRRTFTLERGRYAISIKDEVINKSAAPWNGYVFRKLSRVPTILSRGMTNP
DSFSFNGATWYSPQAGYERRAFKDYMDDGGLNRQITGGWIALLQHHFFTAWIPQNDQASLYVLNKDGPRDVAELRGPAFT
VAPGQTATTEARLWVGPKLVSLIAKEDVKGLDRVIDYSRFSIMAIIGQGLFWVLSHLHSFLHNWGWAIVGLVVLLRLVLY
PLSSAQYKSSAKMRKFQPRLAQLKERYGDDRVKYQQATMELFKKEKINPMGGCLPLLIQMPIFFALYWVLVESVELRQAP
WLGWIQDLTARDPHFILPALNIAIMWATQKLTPTPGIDPMQAKMMQFMPLVFGAMMAFVPSGLVLYWVVNGGLNLLIQWW
MIRQHGEKPSKIIRANAK
>Mature_578_residues
MNQTRVFLIFAWLMVAALLWMEWGKEKAAANAPGAAATQSVPAARDLDAATPSAANVPAAQPIAQAGAPGTVPATSTTTA
TATATPAAAGAAPVVTLTSDVLRLKLDGRSVLDAELLQFPQTKDGTAPVSLLTEDAAHPYNATSGWASEHSPVPGVGGFR
AEQPGTTFELAKGQNTLVVPFVWNGPNGVSIRRTFTLERGRYAISIKDEVINKSAAPWNGYVFRKLSRVPTILSRGMTNP
DSFSFNGATWYSPQAGYERRAFKDYMDDGGLNRQITGGWIALLQHHFFTAWIPQNDQASLYVLNKDGPRDVAELRGPAFT
VAPGQTATTEARLWVGPKLVSLIAKEDVKGLDRVIDYSRFSIMAIIGQGLFWVLSHLHSFLHNWGWAIVGLVVLLRLVLY
PLSSAQYKSSAKMRKFQPRLAQLKERYGDDRVKYQQATMELFKKEKINPMGGCLPLLIQMPIFFALYWVLVESVELRQAP
WLGWIQDLTARDPHFILPALNIAIMWATQKLTPTPGIDPMQAKMMQFMPLVFGAMMAFVPSGLVLYWVVNGGLNLLIQWW
MIRQHGEKPSKIIRANAK

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily

Homologues:

Organism=Homo sapiens, GI223718097, Length=205, Percent_Identity=25.8536585365854, Blast_Score=70, Evalue=5e-12,
Organism=Escherichia coli, GI1790140, Length=587, Percent_Identity=35.2640545144804, Blast_Score=335, Evalue=4e-93,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): OXAA_XANOM (Q2NX52)

Other databases:

- EMBL:   AP008229
- RefSeq:   YP_453399.1
- ProteinModelPortal:   Q2NX52
- SMR:   Q2NX52
- STRING:   Q2NX52
- GeneID:   3857364
- GenomeReviews:   AP008229_GR
- KEGG:   xom:XOO_4370
- eggNOG:   COG0706
- HOGENOM:   HBG507812
- OMA:   TYRGAAF
- PhylomeDB:   Q2NX52
- ProtClustDB:   PRK01318
- BioCyc:   XORY342109:XOO4370-MONOMER
- HAMAP:   MF_01810
- InterPro:   IPR019998
- InterPro:   IPR001708
- PANTHER:   PTHR12428
- PRINTS:   PR00701
- PRINTS:   PR01900
- TIGRFAMs:   TIGR03593
- TIGRFAMs:   TIGR03592

Pfam domain/function: PF02096 60KD_IMP

EC number: NA

Molecular weight: Translated: 63613; Mature: 63613

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x165d8990)-; HASH(0x16a796d8)-; HASH(0x16d2e790)-; HASH(0x1551f520)-; HASH(0x16948cc4)-; HASH(0xe0a5a94)-;

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQTRVFLIFAWLMVAALLWMEWGKEKAAANAPGAAATQSVPAARDLDAATPSAANVPAA
CCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCC
QPIAQAGAPGTVPATSTTTATATATPAAAGAAPVVTLTSDVLRLKLDGRSVLDAELLQFP
CHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEECCCHHHHHHHHHCC
QTKDGTAPVSLLTEDAAHPYNATSGWASEHSPVPGVGGFRAEQPGTTFELAKGQNTLVVP
CCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEE
FVWNGPNGVSIRRTFTLERGRYAISIKDEVINKSAAPWNGYVFRKLSRVPTILSRGMTNP
EEECCCCCCEEEEEEEEECCEEEEEEHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
DSFSFNGATWYSPQAGYERRAFKDYMDDGGLNRQITGGWIALLQHHFFTAWIPQNDQASL
CCCCCCCEEECCCCCCCHHHHHHHHHCCCCCCCEECHHHHHHHHHHHEEEECCCCCCCEE
YVLNKDGPRDVAELRGPAFTVAPGQTATTEARLWVGPKLVSLIAKEDVKGLDRVIDYSRF
EEECCCCCHHHHHHCCCEEEECCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHH
SIMAIIGQGLFWVLSHLHSFLHNWGWAIVGLVVLLRLVLYPLSSAQYKSSAKMRKFQPRL
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
AQLKERYGDDRVKYQQATMELFKKEKINPMGGCLPLLIQMPIFFALYWVLVESVELRQAP
HHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
WLGWIQDLTARDPHFILPALNIAIMWATQKLTPTPGIDPMQAKMMQFMPLVFGAMMAFVP
CHHHHHHHCCCCCCEEEHHHEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
SGLVLYWVVNGGLNLLIQWWMIRQHGEKPSKIIRANAK
CCEEEEEEECCCHHHHHHHHHHHHCCCCCHHHEECCCH
>Mature Secondary Structure
MNQTRVFLIFAWLMVAALLWMEWGKEKAAANAPGAAATQSVPAARDLDAATPSAANVPAA
CCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCC
QPIAQAGAPGTVPATSTTTATATATPAAAGAAPVVTLTSDVLRLKLDGRSVLDAELLQFP
CHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEECCCHHHHHHHHHCC
QTKDGTAPVSLLTEDAAHPYNATSGWASEHSPVPGVGGFRAEQPGTTFELAKGQNTLVVP
CCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEE
FVWNGPNGVSIRRTFTLERGRYAISIKDEVINKSAAPWNGYVFRKLSRVPTILSRGMTNP
EEECCCCCCEEEEEEEEECCEEEEEEHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
DSFSFNGATWYSPQAGYERRAFKDYMDDGGLNRQITGGWIALLQHHFFTAWIPQNDQASL
CCCCCCCEEECCCCCCCHHHHHHHHHCCCCCCCEECHHHHHHHHHHHEEEECCCCCCCEE
YVLNKDGPRDVAELRGPAFTVAPGQTATTEARLWVGPKLVSLIAKEDVKGLDRVIDYSRF
EEECCCCCHHHHHHCCCEEEECCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHH
SIMAIIGQGLFWVLSHLHSFLHNWGWAIVGLVVLLRLVLYPLSSAQYKSSAKMRKFQPRL
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
AQLKERYGDDRVKYQQATMELFKKEKINPMGGCLPLLIQMPIFFALYWVLVESVELRQAP
HHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
WLGWIQDLTARDPHFILPALNIAIMWATQKLTPTPGIDPMQAKMMQFMPLVFGAMMAFVP
CHHHHHHHCCCCCCEEEHHHEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
SGLVLYWVVNGGLNLLIQWWMIRQHGEKPSKIIRANAK
CCEEEEEEECCCHHHHHHHHHHHHCCCCCHHHEECCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA